Ss1.1-Spl1-SPL010041F09.5
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CTGGTTTCCGCCTCGAGTCTTGAAGAAAGAAGCTCCCGGCTCGGCAGCAGCAAAACTTTT
CGGCTGCGGGGCTCCGCGGCCATCGGCGCTCCTGGTCGAGCGATGAGCGCCCCTCCGGTC
CTGCGGCCGCCCAGCCCGCTGTTGCCCGTGGCGGCGGCGGCAGCGGCGGCGGCGGCCGCG
CTGGTCCCGGGGTCGGGGCCGGGGCCCGCGCCGTTCCTAGCTCCCCTCGCAGCCCCGGTC
GGGGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCGCGAGCCGGTGCTGCTTCTGCAG
GACTCCTCCGGCGACTACAGCCTGGCGCACGTCCGCGAGATGGCTTGCTCCATCGTCGAC
CAGAAGTTTCCTGAATGTGGTTTCTATGGAATGTATGATAAGATCCTGCTTTTTCGCCAT
GAACCTACCTCTGAAAACATTCTTCAGCTGGTGAAAACGGCTAGTGATATCCAGGAAGGC
GATCTTATTGAAGTTGTCTTGTCAGCTTCTGCCACCTTTGAAGACTTCCAGATTCGTCCA
CACACTCTCTTTGTTCATTCGTACAGAGCCCCAGCTTTCTGTGATCACTGTGGAGAAATG
CTGTGGGGGCTGGTGCGTCAAGGCCTTAAATGTGAAGGATGCGGTCTGAATTACCACAAG
AGATGTGCATTTAAAATTCCCAACAATTGCAGTGGCGTGAGACGGAGAAAGCTCTCGAAT
GTTTCCCTCACTGGGCTCAGCACTGTCCGCACGGCATCTGCCGAGCTCTCCACCAGTGCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGGTTTCCGCCTCGAGTCTTGAAGAAAGAAGCTCCCGGCTCGGCAGCAGCAAAACTTTT
CGGCTGCGGGGCTCCGCGGCCATCGGCGCTCCTGGTCGAGCGATGAGCGCCCCTCCGGTC
CTGCGGCCGCCCAGCCCGCTGTTGCCCGTGGCGGCGGCGGCAGCGGCGGCGGCGGCCGCG
CTGGTCCCGGGGTCGGGGCCGGGGCCCGCGCCGTTCCTAGCTCCCCTCGCAGCCCCGGTC
GGGGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCGCGAGCCGGTGCTGCTTCTGCAG
GACTCCTCCGGCGACTACAGCCTGGCGCACGTCCGCGAGATGGCTTGCTCCATCGTCGAC
CAGAAGTTTCCTGAATGTGGTTTCTATGGAATGTATGATAAGATCCTGCTTTTTCGCCAT
GAACCTACCTCTGAAAACATTCTTCAGCTGGTGAAAACGGCTAGTGATATCCAGGAAGGC
GATCTTATTGAAGTTGTCTTGTCAGCTTCTGCCACCTTTGAAGACTTCCAGATTCGTCCA
CACACTCTCTTTGTTCATTCGTACAGAGCCCCAGCTTTCTGTGATCACTGTGGAGAAATG
CTGTGGGGGCTGGTGCGTCAAGGCCTTAAATGTGAAGGATGCGGTCTGAATTACCACAAG
AGATGTGCATTTAAAATTCCCAACAATTGCAGTGGCGTGAGACGGAGAAAGCTCTCGAAT
GTTTCCCTCACTGGGCTCAGCACTGTCCGCACGGCATCTGCCGAGCTCTCCACCAGTGCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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536-610, + strand, RNAmicro p=0.996187 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
536-610, + strand, RNAmicro p=0.996187 |
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494-638, gnl|bosTau2|chr21 (27162423-27162567) |
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494-638, gnl|canFam2|chr8 (12094771-12094943) |
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494-638, gnl|danRer3|chrNA (42752668-42752832) |
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494-638, gnl|dasNov1|scaffold_23704 (13423-13566) |
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494-638, gnl|echTel1|scaffold_184670 (3313-3483) |
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494-638, gnl|fr1|chrUn (79349079-79349237) |
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494-638, gnl|galGal2|chr5 (30735563-30735735) |
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494-638, gnl|hg17|chr14 (29205028-29205200) |
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494-638, gnl|Hg17|chr14 (29205176-29205033) |
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494-638, gnl|loxAfr1|scaffold_64109 (599-761) |
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494-638, gnl|mm7|chr12 (48434843-48435014) |
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494-638, gnl|Mm7|chr12 (48434990-48434848) |
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494-638, gnl|monDom2|scaffold_53 (1825573-1825747) |
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494-638, gnl|oryCun1|scaffold_199087 (62863-63035) |
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494-638, gnl|panTro1|chr15 (28338911-28339083) |
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494-638, gnl|rheMac2|chr7 (92578760-92578932) |
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494-638, gnl|rn3|chr6 (70455622-70455793) |
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494-638, gnl|tetNig1|chrUn_random (91343558-91343697) |
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494-638, gnl|xenTro1|scaffold_199 (1758950-1759120) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
494-638, gnl|bosTau2|chr21 (27162423-27162567) |
|
494-638, gnl|canFam2|chr8 (12094771-12094943) |
|
494-638, gnl|danRer3|chrNA (42752668-42752832) |
|
494-638, gnl|dasNov1|scaffold_23704 (13423-13566) |
|
494-638, gnl|echTel1|scaffold_184670 (3313-3483) |
|
494-638, gnl|fr1|chrUn (79349079-79349237) |
|
494-638, gnl|galGal2|chr5 (30735563-30735735) |
|
494-638, gnl|hg17|chr14 (29205028-29205200) |
|
494-638, gnl|Hg17|chr14 (29205176-29205033) |
|
494-638, gnl|loxAfr1|scaffold_64109 (599-761) |
|
494-638, gnl|mm7|chr12 (48434843-48435014) |
|
494-638, gnl|Mm7|chr12 (48434990-48434848) |
|
494-638, gnl|monDom2|scaffold_53 (1825573-1825747) |
|
494-638, gnl|oryCun1|scaffold_199087 (62863-63035) |
|
494-638, gnl|panTro1|chr15 (28338911-28339083) |
|
494-638, gnl|rheMac2|chr7 (92578760-92578932) |
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494-638, gnl|rn3|chr6 (70455622-70455793) |
|
494-638, gnl|tetNig1|chrUn_random (91343558-91343697) |
|
494-638, gnl|xenTro1|scaffold_199 (1758950-1759120) |
