Non-Coding RNA Search

Ss1.1-Spl1-SPL01B030105.5

Sequence:


               
               TTATAAGAGGTTCCTTCATTATGCTTTTCTTGGTGGTGCATGGGGTGGTTTCTTCTGAAT
GACATTCCGTGCGAGTCTATTTTAATGAGAGATGTACTTCCATTAAGCAGCCCCCACCCC
CACCCCATCTCCAAGAACAAGTTCACTGGTCTTTCGTTGTCATTTTAAAGGAGTGCTCAA
TATTCCTAAGTACTTTTTGGTGCCACATTATTCCTCCACTGTGCTTTATCCCCACTGCTG
AGCCAGCTTGTAGGCACATTACGTCCTGAAGGCAGCCCTTGTCTTCTGTGCTTAGTTTTT
GGATAGATGTTAATGTCTTGACGGCAGTATCAATTTGTTTTCAACAGCTATAAAGCTGTT
TATGAGAGGTTTACCCTATTCGTTTGCAGTAGTGTTTTGTTTAGGTAGCAGAGTGTTCCT
GGGAATTACTTTTTGACAGTGCTTTATGCCTGATCATCTTTTTAAGAGATTGCATATTTA
AAAATTTTGTTCTTCTCTAGCTCATTGTCATTGGAACTCTGAAGGTCTGTGATCTTTAAG
TTTGGCCACGTGCCAGGAGAGCAGAGCATGTAGGGTTGTGGATACCGCTCAGCCAGGAGA
GGGGTCTCCTGCCAGAAGCCACTGGGTACGTGAGGACAGCAGACGTAAGTGACTTGGTCA
CTGACGGCTAGTTTTCTTCCCTTTCTTTTTGTTTTTGGCCGTGCCTGTGGCATGCAGAAG
GTCCGGGGCCAGGGATCAAACCCGCGACACAGCTGCCACCTGAGCCACAGCAGTGACAGT
------------------------------------------------TCTTGAATATTT
GCAGGAATTAAAACGTGACTAAAGATAGAATATTTAGCTAGGTGTTGTGTACTAGAAACA
GTAGTGTCTTGCTCCAATTAAGAACCGTAAACAAGTCCAAGTATCAACTATAAATGAGAT
TAGGATTCTGTTCTCATTTCTCAATGTGGAAATATAGTCCCACATCAGCATTATTTTCTG
TTTGGAGTTCTTATGTACAGAGGAAAAATAAGATATACTAGGTCACTTAAAAAGAAAAAG
AAAAAACGATGTCCCAGTCTTCACACTAAGGGAGAGGAAGTCCTAAGTCTCTACAAATCC
ATTAGAATTAACGAAGGTGCAGGGAGAAAGACTGACGATTTTCATTTAGAAAATCACCTC
AGTAATGCCACCTCCTCCTTTAACCACATTAATCTTCTCAAATTTTCTTGAAAGCTTTGT
CTATTTCCAATTGATTGGGACATCCATATGTTAAAGAAAAATGAGAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATAAGAGGTTCCTTCATTATGCTTTTCTTGGTGGTGCATGGGGTGGTTTCTTCTGAAT
GACATTCCGTGCGAGTCTATTTTAATGAGAGATGTACTTCCATTAAGCAGCCCCCACCCC
CACCCCATCTCCAAGAACAAGTTCACTGGTCTTTCGTTGTCATTTTAAAGGAGTGCTCAA
TATTCCTAAGTACTTTTTGGTGCCACATTATTCCTCCACTGTGCTTTATCCCCACTGCTG
AGCCAGCTTGTAGGCACATTACGTCCTGAAGGCAGCCCTTGTCTTCTGTGCTTAGTTTTT
GGATAGATGTTAATGTCTTGACGGCAGTATCAATTTGTTTTCAACAGCTATAAAGCTGTT
TATGAGAGGTTTACCCTATTCGTTTGCAGTAGTGTTTTGTTTAGGTAGCAGAGTGTTCCT
GGGAATTACTTTTTGACAGTGCTTTATGCCTGATCATCTTTTTAAGAGATTGCATATTTA
AAAATTTTGTTCTTCTCTAGCTCATTGTCATTGGAACTCTGAAGGTCTGTGATCTTTAAG
TTTGGCCACGTGCCAGGAGAGCAGAGCATGTAGGGTTGTGGATACCGCTCAGCCAGGAGA
GGGGTCTCCTGCCAGAAGCCACTGGGTACGTGAGGACAGCAGACGTAAGTGACTTGGTCA
CTGACGGCTAGTTTTCTTCCCTTTCTTTTTGTTTTTGGCCGTGCCTGTGGCATGCAGAAG
GTCCGGGGCCAGGGATCAAACCCGCGACACAGCTGCCACCTGAGCCACAGCAGTGACAGT
------------------------------------------------TCTTGAATATTT
GCAGGAATTAAAACGTGACTAAAGATAGAATATTTAGCTAGGTGTTGTGTACTAGAAACA
GTAGTGTCTTGCTCCAATTAAGAACCGTAAACAAGTCCAAGTATCAACTATAAATGAGAT
TAGGATTCTGTTCTCATTTCTCAATGTGGAAATATAGTCCCACATCAGCATTATTTTCTG
TTTGGAGTTCTTATGTACAGAGGAAAAATAAGATATACTAGGTCACTTAAAAAGAAAAAG
AAAAAACGATGTCCCAGTCTTCACACTAAGGGAGAGGAAGTCCTAAGTCTCTACAAATCC
ATTAGAATTAACGAAGGTGCAGGGAGAAAGACTGACGATTTTCATTTAGAAAATCACCTC
AGTAATGCCACCTCCTCCTTTAACCACATTAATCTTCTCAAATTTTCTTGAAAGCTTTGT
CTATTTCCAATTGATTGGGACATCCATATGTTAAAGAAAAATGAGAAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               25-380, gnl|bosTau2|chr11 (72728633-72728283)
               

               
               25-380, gnl|Hg17|chr9 (124225886-124225571)
               

               
               25-380, gnl|Mm7|chr2 (38620263-38619943)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-380, gnl|bosTau2|chr11 (72728633-72728283)
               

               
               25-380, gnl|Hg17|chr9 (124225886-124225571)
               

               
               25-380, gnl|Mm7|chr2 (38620263-38619943)

	25-380, gnl\|bosTau2\|chr11 (72728633-72728283)
	25-380, gnl\|Hg17\|chr9 (124225886-124225571)
	25-380, gnl\|Mm7\|chr2 (38620263-38619943)