Non-Coding RNA Search

Ss1.1-Spl1-SPL01B090100.5

Sequence:


               
               TAGCTGTTTGTATTTTGGCTGCTGCAGGAGCCATTTTAGAAATAAAATAATTGCCTTCAA
TAGATGATAATGAAAATACAGAAGAAAGAGAAGCAGTTGTCACATGTAAAAGTTCTGAGT
CACTCCCCAATGTCTGATGCCTCTGTCACTTTTGACTACAAATCCCCCTCCCCGTGTGAC
CACAGCACTGATCAGGAGGAGAAAATCGAAGATGTGGCCAGTCACTGTCTGCCCCAGAAG
GACCTGTACGCTGCTGCAGAGGATACTGAGGCCCTTTTCCCCAGGAAAACGACGTCCCAT
AACGGGTTGGAGGACAGTGGAGGAGGTGGCACTGGCGTGAAGAAGAAACGGAAGAAAAAG
GATCCAGGAGAGCAAGAGGGGGCGGCAAAGGGAAGCAAGGACAGGGAGCCCAAGCCAAAG
AGGAAGCGAGAACCTAGAGAGCCAAAGGAGCCCAGGAAGGCCAAGGAGCCCAGGAGGCCC
AAGGAGCCCAAGGAGCCCAAGCAGAAGGACGGGATCAAGAAGGCACGGAAGCCCCGGGAG
GCCTCGGGCCCCAAGGAGGCCAAAGAGAAGAGGAGCAGCACAGACTCTGCAGTCCGGACG
AAGTCCAGGAAGGCCAGCAAGGAGCAAGGACCAACCCCTGTGGAGAAAAAGAAGAAAGGA
AAAAGGAAAAGTGAAACCACAGTGGAGAGTTTAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGCTGTTTGTATTTTGGCTGCTGCAGGAGCCATTTTAGAAATAAAATAATTGCCTTCAA
TAGATGATAATGAAAATACAGAAGAAAGAGAAGCAGTTGTCACATGTAAAAGTTCTGAGT
CACTCCCCAATGTCTGATGCCTCTGTCACTTTTGACTACAAATCCCCCTCCCCGTGTGAC
CACAGCACTGATCAGGAGGAGAAAATCGAAGATGTGGCCAGTCACTGTCTGCCCCAGAAG
GACCTGTACGCTGCTGCAGAGGATACTGAGGCCCTTTTCCCCAGGAAAACGACGTCCCAT
AACGGGTTGGAGGACAGTGGAGGAGGTGGCACTGGCGTGAAGAAGAAACGGAAGAAAAAG
GATCCAGGAGAGCAAGAGGGGGCGGCAAAGGGAAGCAAGGACAGGGAGCCCAAGCCAAAG
AGGAAGCGAGAACCTAGAGAGCCAAAGGAGCCCAGGAAGGCCAAGGAGCCCAGGAGGCCC
AAGGAGCCCAAGGAGCCCAAGCAGAAGGACGGGATCAAGAAGGCACGGAAGCCCCGGGAG
GCCTCGGGCCCCAAGGAGGCCAAAGAGAAGAGGAGCAGCACAGACTCTGCAGTCCGGACG
AAGTCCAGGAAGGCCAGCAAGGAGCAAGGACCAACCCCTGTGGAGAAAAAGAAGAAAGGA
AAAAGGAAAAGTGAAACCACAGTGGAGAGTTTAGAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5TH01_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5TH01_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               253-372, + strand, RNAz p=0.77238

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               253-372, + strand, RNAz p=0.77238

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               93-617, gnl|bosTau2|chr13 (51734377-51733853)
               

               
               93-617, gnl|Hg17|chr20 (39595627-39595103)
               

               
               93-617, gnl|Mm7|chr2 (160793799-160793278)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               93-617, gnl|bosTau2|chr13 (51734377-51733853)
               

               
               93-617, gnl|Hg17|chr20 (39595627-39595103)
               

               
               93-617, gnl|Mm7|chr2 (160793799-160793278)

	93-617, gnl\|bosTau2\|chr13 (51734377-51733853)
	93-617, gnl\|Hg17\|chr20 (39595627-39595103)
	93-617, gnl\|Mm7\|chr2 (160793799-160793278)