Ss1.1-Spl1-SPL01B100061.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGAATTTTTCTACCTCGTACAACATCAGCATCACTGCCTTGTCCTGTAATGGCTCCAA GATGGCAGCGCCCACCCAGAACACCTGCCTCACTGGCATCACAGCTCCCCCTTCTCCTGA TGGATCCCCTAATATTACATCTGTCAGTCACAATTCGGTAAAGGTCAAATTCAGCGGGTT TGAAGCCAGCCATGGACCCATCAAAGCCTATGCTGTCATTCTTACCACTGGGGAAGCTGT TCACCCGTCGGCAGATGTTTTGAGATACACCTACGAAGATTTCAAAAAGGGGACCTCGGA CACTTATGTGACATACCTCATAACAACAGAAGAACAGAAACGTTCTCAGGGCTTGTCTGA AGTCTTGAAATATGAAATCAACGTTGGAAATGAATCCACCACACATGGCTATTACAATGG GAAGCTGGAACCTCTGGGCTCCTATCGGGCTTGTGTGGCCGGCTTCACCAATATCACCTT CAACCCTCACAGCGATGGACTCATAGACGGGAATGAGAGTTATGTGTCCTTCAGCCGCTA TTCAGATGCTGTTTTCTTGCCCCAGGACCCAGGTGTCATCTGTGGAGCAGTTTTTGGATG TATCTTTGGTGCTCTGGTGATCGTGGCCGTGGGAGGTTTCATCTTCTGGAGGAAAAAAAG GTGACTCTTGCTTATGTTAATAATACCCTATGTTTATGTATTTATTCATTCATTTATTTC CGCTGCACCTGTGGCATATGAAATTTCCCAGGGTAGGGGTCGAATTGGAGCTGCACCTGC GGGCCTGTACCACGGCCACAGCAACGCTGGATCCGAGTCGTGTCTTTGACCTGTGCTGCA GCTTGAGGTGACACTGGATCCTTAGCCCACAGAGCGAGGCCAGGGATTGAACCCCCATCG TCACAGACACCATGTTGGGTTCTTAACCTGCTGAGCCACAACGGGAACTCCTAATACCCT GCTTTTCAAGGGAGCTTTGTATTGTAGATAATCAGATATTCACTCGGATGGATGAGGTGG GATAATGAGCCCCCAGGTCCCCGTCATCCAGAGTCGTCACCGTCTTAGTTCATTTCACCC CTCGAGCTGGAGGATTTTAAAGCCTCAGGTCGTGGGAAGCACTGCAGCAGAAGGTGCTGC TTTCAGATGGCTGTTCTAGTTCACCAGTCAGTGTTGAGAGCTTCCGTTTTAGAGTTAGCT AAGCTTGAACACAGCGTCCGTCTCTGACCAGCTTTGAGGACGCTTGGCCTTCATATCTTT GATAACCTGTGATACAGGGAAGGTAACAGTGCCTAACTCTTGATGCTCAGGGGGCATTAA ATAAACTGCTTCTGGAGTTCCCGTCGTGGGGCAGTGGTTAATGAATCCGACTAGGAACCA TGAGGTTGCGGGTTCGATCCCTGCCCTTGCTCAGTGGGTTAACGGTCCAGCGTTGCCGTG AGCTGTGGTGTAGGTTGTAGACGCGGCTCGGATCCCGTGTTGCTGTGGCTCTGGCGTAGG CTAGTGGCTATAGCTCCGATTAGACCCCTAGCCTGGGAACCTCCATATGCTGCAGGAGCA GCCCAAGAAATGGCAAAAAGACAAAAGAAAAAAAAAAAAGTGCTTCTTCGGCAGTGTGTT GGTACTTTGTACGCTAGTATTATTTTTTCAGTACAGTTACCCTTTCGGGTAGTTAAATAG GAAAAGAGTACGTTTTGAGCACTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGAATTTTTCTACCTCGTACAACATCAGCATCACTGCCTTGTCCTGTAATGGCTCCAA GATGGCAGCGCCCACCCAGAACACCTGCCTCACTGGCATCACAGCTCCCCCTTCTCCTGA TGGATCCCCTAATATTACATCTGTCAGTCACAATTCGGTAAAGGTCAAATTCAGCGGGTT TGAAGCCAGCCATGGACCCATCAAAGCCTATGCTGTCATTCTTACCACTGGGGAAGCTGT TCACCCGTCGGCAGATGTTTTGAGATACACCTACGAAGATTTCAAAAAGGGGACCTCGGA CACTTATGTGACATACCTCATAACAACAGAAGAACAGAAACGTTCTCAGGGCTTGTCTGA AGTCTTGAAATATGAAATCAACGTTGGAAATGAATCCACCACACATGGCTATTACAATGG GAAGCTGGAACCTCTGGGCTCCTATCGGGCTTGTGTGGCCGGCTTCACCAATATCACCTT CAACCCTCACAGCGATGGACTCATAGACGGGAATGAGAGTTATGTGTCCTTCAGCCGCTA TTCAGATGCTGTTTTCTTGCCCCAGGACCCAGGTGTCATCTGTGGAGCAGTTTTTGGATG TATCTTTGGTGCTCTGGTGATCGTGGCCGTGGGAGGTTTCATCTTCTGGAGGAAAAAAAG GTGACTCTTGCTTATGTTAATAATACCCTATGTTTATGTATTTATTCATTCATTTATTTC CGCTGCACCTGTGGCATATGAAATTTCCCAGGGTAGGGGTCGAATTGGAGCTGCACCTGC GGGCCTGTACCACGGCCACAGCAACGCTGGATCCGAGTCGTGTCTTTGACCTGTGCTGCA GCTTGAGGTGACACTGGATCCTTAGCCCACAGAGCGAGGCCAGGGATTGAACCCCCATCG TCACAGACACCATGTTGGGTTCTTAACCTGCTGAGCCACAACGGGAACTCCTAATACCCT GCTTTTCAAGGGAGCTTTGTATTGTAGATAATCAGATATTCACTCGGATGGATGAGGTGG GATAATGAGCCCCCAGGTCCCCGTCATCCAGAGTCGTCACCGTCTTAGTTCATTTCACCC CTCGAGCTGGAGGATTTTAAAGCCTCAGGTCGTGGGAAGCACTGCAGCAGAAGGTGCTGC TTTCAGATGGCTGTTCTAGTTCACCAGTCAGTGTTGAGAGCTTCCGTTTTAGAGTTAGCT AAGCTTGAACACAGCGTCCGTCTCTGACCAGCTTTGAGGACGCTTGGCCTTCATATCTTT GATAACCTGTGATACAGGGAAGGTAACAGTGCCTAACTCTTGATGCTCAGGGGGCATTAA ATAAACTGCTTCTGGAGTTCCCGTCGTGGGGCAGTGGTTAATGAATCCGACTAGGAACCA TGAGGTTGCGGGTTCGATCCCTGCCCTTGCTCAGTGGGTTAACGGTCCAGCGTTGCCGTG AGCTGTGGTGTAGGTTGTAGACGCGGCTCGGATCCCGTGTTGCTGTGGCTCTGGCGTAGG CTAGTGGCTATAGCTCCGATTAGACCCCTAGCCTGGGAACCTCCATATGCTGCAGGAGCA GCCCAAGAAATGGCAAAAAGACAAAAGAAAAAAAAAAAAGTGCTTCTTCGGCAGTGTGTT GGTACTTTGTACGCTAGTATTATTTTTTCAGTACAGTTACCCTTTCGGGTAGTTAAATAG GAAAAGAGTACGTTTTGAGCACTG |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 102-234, gnl|bosTau2|chr15 (49973494-49973626) | |
| 102-234, gnl|canFam2|chr18 (44645412-44645271) | |
| 102-234, gnl|dasNov1|scaffold_9028 (4272-4413) | |
| 102-234, gnl|galGal2|chr5 (10430980-10431121) | |
| 102-234, gnl|hg17|chr11 (48121046-48121187) | |
| 102-234, gnl|Hg17|chr11 (48121044-48121176) | |
| 102-234, gnl|loxAfr1|scaffold_1640 (62236-62377) | |
| 102-234, gnl|mm7|chr2 (90305943-90305802) | |
| 102-234, gnl|Mm7|chr2 (90305943-90305811) | |
| 102-234, gnl|monDom2|scaffold_33 (13899911-13900052) | |
| 102-234, gnl|oryCun1|scaffold_154417 (21384-21526) | |
| 102-234, gnl|panTro1|chr9 (48659850-48659991) | |
| 102-234, gnl|rheMac2|chr14 (23959314-23959173) | |
| 102-234, gnl|rn3|chr3 (74706152-74706011) | |
| 235-448, gnl|bosTau2|chr15 (49975467-49975680) | |
| 235-448, gnl|canFam2|chr18 (44643858-44643609) | |
| 235-448, gnl|dasNov1|scaffold_9028 (6924-7164) | |
| 235-448, gnl|echTel1|scaffold_283478 (51490-51245) | |
| 235-448, gnl|galGal2|chr5 (10433409-10433650) | |
| 235-448, gnl|hg17|chr11 (48122786-48123032) | |
| 235-448, gnl|Hg17|chr11 (48122801-48123014) | |
| 235-448, gnl|loxAfr1|scaffold_1640 (64165-64411) | |
| 235-448, gnl|mm7|chr2 (90304228-90303984) | |
| 235-448, gnl|Mm7|chr2 (90304211-90303998) | |
| 235-448, gnl|monDom2|scaffold_33 (13900804-13901053) | |
| 235-448, gnl|oryCun1|scaffold_154417 (23844-24090) | |
| 235-448, gnl|panTro1|chr9 (48661584-48661830) | |
| 235-448, gnl|rheMac2|chr14 (23957155-23956909) | |
| 235-448, gnl|rn3|chr3 (74704364-74704120) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 102-234, gnl|bosTau2|chr15 (49973494-49973626) | |
| 102-234, gnl|canFam2|chr18 (44645412-44645271) | |
| 102-234, gnl|dasNov1|scaffold_9028 (4272-4413) | |
| 102-234, gnl|galGal2|chr5 (10430980-10431121) | |
| 102-234, gnl|hg17|chr11 (48121046-48121187) | |
| 102-234, gnl|Hg17|chr11 (48121044-48121176) | |
| 102-234, gnl|loxAfr1|scaffold_1640 (62236-62377) | |
| 102-234, gnl|mm7|chr2 (90305943-90305802) | |
| 102-234, gnl|Mm7|chr2 (90305943-90305811) | |
| 102-234, gnl|monDom2|scaffold_33 (13899911-13900052) | |
| 102-234, gnl|oryCun1|scaffold_154417 (21384-21526) | |
| 102-234, gnl|panTro1|chr9 (48659850-48659991) | |
| 102-234, gnl|rheMac2|chr14 (23959314-23959173) | |
| 102-234, gnl|rn3|chr3 (74706152-74706011) | |
| 235-448, gnl|bosTau2|chr15 (49975467-49975680) | |
| 235-448, gnl|canFam2|chr18 (44643858-44643609) | |
| 235-448, gnl|dasNov1|scaffold_9028 (6924-7164) | |
| 235-448, gnl|echTel1|scaffold_283478 (51490-51245) | |
| 235-448, gnl|galGal2|chr5 (10433409-10433650) | |
| 235-448, gnl|hg17|chr11 (48122786-48123032) | |
| 235-448, gnl|Hg17|chr11 (48122801-48123014) | |
| 235-448, gnl|loxAfr1|scaffold_1640 (64165-64411) | |
| 235-448, gnl|mm7|chr2 (90304228-90303984) | |
| 235-448, gnl|Mm7|chr2 (90304211-90303998) | |
| 235-448, gnl|monDom2|scaffold_33 (13900804-13901053) | |
| 235-448, gnl|oryCun1|scaffold_154417 (23844-24090) | |
| 235-448, gnl|panTro1|chr9 (48661584-48661830) | |
| 235-448, gnl|rheMac2|chr14 (23957155-23956909) | |
| 235-448, gnl|rn3|chr3 (74704364-74704120) |