Ss1.1-Spl1-SPL01C030059.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACAACATGGCTGCCGCCTTTCGGTCCCCGCAGCAAGTTCTGCTGCTGCGGAGTTTGGTGT GGCCCGGGGTCTTGGACTCAGGCTCCACGTGCTGCCGCTGCCCTCTCGGAGCTAAAAGAT ACCTACTTACGGAGAATATTATGAAATTAAAAGAATTCCAGCATAAGAAGGTGGCTATTG CATGTAATCTTCCTGGCACCAAAGAAACCTATTTGAGAAACTTGGAAGAGAAGTTGACCC AGAACAAGCTCATCTTGAAAGAGGAATTGAGAACCTTGCTTCACCTGTGTGAGTCCCGGG ATGACATGGAGCTGGCTAAAAACGTCATTTATAGGTACCATGCAGAGAATAGGAATATGA CTGTGGGGGAGTATAAGTTTGGACCGCTGTTCATGAGGCTGTGCTACGAGCTGGATCTGG AGGAGTCTGCAGTGGAGCTCATCAAAGACCAGCATTTACGAGGTTTCTTCTCAGACTGCA CATCATTCAATATTTTGATGGATACATTGTTTATCAAAGGCAAATATAAAAGTGCATTGG AAGTAATGATTGAGATGAAAAACCAAGATGTGAAGTTCAGCAAAGACACCTACGTTCTTG CTTTTGCAGTTTGCTACAAATTGAATAGCCCTGAATCTTTTAAAATCTGTACCACATTAA GAGAAGAAGCCCTAATCAAAGGAGAAGTCCTCTCCAGGAGAGCATCCTGTTTTGCAGTGG CGCTAGCTCTGAACCAGAACCAGCCAGCAAAGGCTCTATCCATTTTTTCTCAAATCATGA AGCCGGAAAGCATAATCTGCACTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACAACATGGCTGCCGCCTTTCGGTCCCCGCAGCAAGTTCTGCTGCTGCGGAGTTTGGTGT GGCCCGGGGTCTTGGACTCAGGCTCCACGTGCTGCCGCTGCCCTCTCGGAGCTAAAAGAT ACCTACTTACGGAGAATATTATGAAATTAAAAGAATTCCAGCATAAGAAGGTGGCTATTG CATGTAATCTTCCTGGCACCAAAGAAACCTATTTGAGAAACTTGGAAGAGAAGTTGACCC AGAACAAGCTCATCTTGAAAGAGGAATTGAGAACCTTGCTTCACCTGTGTGAGTCCCGGG ATGACATGGAGCTGGCTAAAAACGTCATTTATAGGTACCATGCAGAGAATAGGAATATGA CTGTGGGGGAGTATAAGTTTGGACCGCTGTTCATGAGGCTGTGCTACGAGCTGGATCTGG AGGAGTCTGCAGTGGAGCTCATCAAAGACCAGCATTTACGAGGTTTCTTCTCAGACTGCA CATCATTCAATATTTTGATGGATACATTGTTTATCAAAGGCAAATATAAAAGTGCATTGG AAGTAATGATTGAGATGAAAAACCAAGATGTGAAGTTCAGCAAAGACACCTACGTTCTTG CTTTTGCAGTTTGCTACAAATTGAATAGCCCTGAATCTTTTAAAATCTGTACCACATTAA GAGAAGAAGCCCTAATCAAAGGAGAAGTCCTCTCCAGGAGAGCATCCTGTTTTGCAGTGG CGCTAGCTCTGAACCAGAACCAGCCAGCAAAGGCTCTATCCATTTTTTCTCAAATCATGA AGCCGGAAAGCATAATCTGCACTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 67 entry(ies) | More info |
| Aligned organism(s): 67 entry(ies) | Help | Less info |
| 203-336, gnl|bosTau2|chr20 (6537312-6537445) | |
| 203-336, gnl|Hg17|chr5 (71658193-71658326) | |
| 203-336, gnl|Mm7|chr13 (96409829-96409696) | |
| 451-562, gnl|bosTau2|chr20 (6545236-6545347) | |
| 451-562, gnl|canFam2|chr2 (58236763-58236823) | |
| 451-562, gnl|canFam2|chr2 (58236688-58236862) | |
| 451-562, gnl|danRer3|chr5 (33753101-33753234) | |
| 451-562, gnl|dasNov1|scaffold_2110 (16213-16135) | |
| 451-562, gnl|dasNov1|scaffold_2110 (16258-16104) | |
| 451-562, gnl|echTel1|scaffold_157366 (5713-5791) | |
| 451-562, gnl|echTel1|scaffold_157366 (5668-5825) | |
| 451-562, gnl|fr1|chrUn (120249221-120249369) | |
| 451-562, gnl|hg17|chr10 (90626594-90626669) | |
| 451-562, gnl|hg17|chr5 (71666555-71666716) | |
| 451-562, gnl|Hg17|chr5 (71666599-71666710) | |
| 451-562, gnl|loxAfr1|scaffold_39815 (8055-7977) | |
| 451-562, gnl|loxAfr1|scaffold_39815 (8101-7943) | |
| 451-562, gnl|mm7|chr13 (96402763-96402685) | |
| 451-562, gnl|mm7|chr13 (96402807-96402646) | |
| 451-562, gnl|Mm7|chr13 (96402765-96402650) | |
| 451-562, gnl|monDom2|scaffold_60 (5325965-5326111) | |
| 451-562, gnl|oryCun1|scaffold_203710 (175842-175778) | |
| 451-562, gnl|oryCun1|scaffold_203710 (175900-175745) | |
| 451-562, gnl|panTro1|chr4 (43795917-43795756) | |
| 451-562, gnl|panTro1|chr8 (92316471-92316546) | |
| 451-562, gnl|rheMac2|chr6 (68483572-68483733) | |
| 451-562, gnl|rheMac2|chr9 (88453207-88453282) | |
| 451-562, gnl|rn3|chr2 (30246479-30246401) | |
| 451-562, gnl|rn3|chr2 (30246525-30246362) | |
| 451-562, gnl|tetNig1|chr4 (2978561-2978669) | |
| 623-737, gnl|bosTau2|chr20 (6548001-6548115) | |
| 623-737, gnl|canFam2|chr2 (58239916-58239803) | |
| 623-737, gnl|canFam2|chr2 (58239802-58239903) | |
| 623-737, gnl|canFam2|chr2 (58239790-58239921) | |
| 623-737, gnl|danRer3|chr5 (33754400-33754535) | |
| 623-737, gnl|dasNov1|scaffold_2110 (11078-11191) | |
| 623-737, gnl|dasNov1|scaffold_2110 (11191-11092) | |
| 623-737, gnl|dasNov1|scaffold_2110 (11204-11073) | |
| 623-737, gnl|echTel1|scaffold_157366 (8677-8564) | |
| 623-737, gnl|echTel1|scaffold_157366 (8563-8669) | |
| 623-737, gnl|echTel1|scaffold_157366 (8551-8682) | |
| 623-737, gnl|hg17|chr10 (90626759-90626856) | |
| 623-737, gnl|hg17|chr14 (20062701-20062814) | |
| 623-737, gnl|hg17|chr5 (71670193-71670324) | |
| 623-737, gnl|Hg17|chr5 (71670204-71670318) | |
| 623-737, gnl|loxAfr1|scaffold_39815 (4180-4293) | |
| 623-737, gnl|loxAfr1|scaffold_39815 (4294-4194) | |
| 623-737, gnl|loxAfr1|scaffold_39815 (4306-4175) | |
| 623-737, gnl|mm7|chr13 (96399753-96399863) | |
| 623-737, gnl|mm7|chr13 (96399864-96399764) | |
| 623-737, gnl|mm7|chr13 (96399876-96399745) | |
| 623-737, gnl|Mm7|chr13 (96399863-96399749) | |
| 623-737, gnl|monDom2|scaffold_51 (3268074-3267963) | |
| 623-737, gnl|monDom2|scaffold_60 (5335014-5335143) | |
| 623-737, gnl|oryCun1|scaffold_203710 (171915-172025) | |
| 623-737, gnl|oryCun1|scaffold_203710 (172026-171926) | |
| 623-737, gnl|oryCun1|scaffold_203710 (172038-171907) | |
| 623-737, gnl|panTro1|chr4 (43792577-43792446) | |
| 623-737, gnl|panTro1|chr8 (92316636-92316733) | |
| 623-737, gnl|panTro1|chrUn_random (21392771-21392884) | |
| 623-737, gnl|rheMac2|chr7 (83229130-83229243) | |
| 623-737, gnl|rheMac2|chr7 (83229244-83229132) | |
| 623-737, gnl|rheMac2|chr9 (88453372-88453469) | |
| 623-737, gnl|rn3|chr2 (30243379-30243489) | |
| 623-737, gnl|rn3|chr2 (30243490-30243390) | |
| 623-737, gnl|rn3|chr2 (30243502-30243371) | |
| 623-737, gnl|tetNig1|chr4 (2979016-2979144) |
| Aligned organism(s): 67 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 203-336, gnl|bosTau2|chr20 (6537312-6537445) | |
| 203-336, gnl|Hg17|chr5 (71658193-71658326) | |
| 203-336, gnl|Mm7|chr13 (96409829-96409696) | |
| 451-562, gnl|bosTau2|chr20 (6545236-6545347) | |
| 451-562, gnl|canFam2|chr2 (58236763-58236823) | |
| 451-562, gnl|canFam2|chr2 (58236688-58236862) | |
| 451-562, gnl|danRer3|chr5 (33753101-33753234) | |
| 451-562, gnl|dasNov1|scaffold_2110 (16213-16135) | |
| 451-562, gnl|dasNov1|scaffold_2110 (16258-16104) | |
| 451-562, gnl|echTel1|scaffold_157366 (5713-5791) | |
| 451-562, gnl|echTel1|scaffold_157366 (5668-5825) | |
| 451-562, gnl|fr1|chrUn (120249221-120249369) | |
| 451-562, gnl|hg17|chr10 (90626594-90626669) | |
| 451-562, gnl|hg17|chr5 (71666555-71666716) | |
| 451-562, gnl|Hg17|chr5 (71666599-71666710) | |
| 451-562, gnl|loxAfr1|scaffold_39815 (8055-7977) | |
| 451-562, gnl|loxAfr1|scaffold_39815 (8101-7943) | |
| 451-562, gnl|mm7|chr13 (96402763-96402685) | |
| 451-562, gnl|mm7|chr13 (96402807-96402646) | |
| 451-562, gnl|Mm7|chr13 (96402765-96402650) | |
| 451-562, gnl|monDom2|scaffold_60 (5325965-5326111) | |
| 451-562, gnl|oryCun1|scaffold_203710 (175842-175778) | |
| 451-562, gnl|oryCun1|scaffold_203710 (175900-175745) | |
| 451-562, gnl|panTro1|chr4 (43795917-43795756) | |
| 451-562, gnl|panTro1|chr8 (92316471-92316546) | |
| 451-562, gnl|rheMac2|chr6 (68483572-68483733) | |
| 451-562, gnl|rheMac2|chr9 (88453207-88453282) | |
| 451-562, gnl|rn3|chr2 (30246479-30246401) | |
| 451-562, gnl|rn3|chr2 (30246525-30246362) | |
| 451-562, gnl|tetNig1|chr4 (2978561-2978669) | |
| 623-737, gnl|bosTau2|chr20 (6548001-6548115) | |
| 623-737, gnl|canFam2|chr2 (58239916-58239803) | |
| 623-737, gnl|canFam2|chr2 (58239802-58239903) | |
| 623-737, gnl|canFam2|chr2 (58239790-58239921) | |
| 623-737, gnl|danRer3|chr5 (33754400-33754535) | |
| 623-737, gnl|dasNov1|scaffold_2110 (11078-11191) | |
| 623-737, gnl|dasNov1|scaffold_2110 (11191-11092) | |
| 623-737, gnl|dasNov1|scaffold_2110 (11204-11073) | |
| 623-737, gnl|echTel1|scaffold_157366 (8677-8564) | |
| 623-737, gnl|echTel1|scaffold_157366 (8563-8669) | |
| 623-737, gnl|echTel1|scaffold_157366 (8551-8682) | |
| 623-737, gnl|hg17|chr10 (90626759-90626856) | |
| 623-737, gnl|hg17|chr14 (20062701-20062814) | |
| 623-737, gnl|hg17|chr5 (71670193-71670324) | |
| 623-737, gnl|Hg17|chr5 (71670204-71670318) | |
| 623-737, gnl|loxAfr1|scaffold_39815 (4180-4293) | |
| 623-737, gnl|loxAfr1|scaffold_39815 (4294-4194) | |
| 623-737, gnl|loxAfr1|scaffold_39815 (4306-4175) | |
| 623-737, gnl|mm7|chr13 (96399753-96399863) | |
| 623-737, gnl|mm7|chr13 (96399864-96399764) | |
| 623-737, gnl|mm7|chr13 (96399876-96399745) | |
| 623-737, gnl|Mm7|chr13 (96399863-96399749) | |
| 623-737, gnl|monDom2|scaffold_51 (3268074-3267963) | |
| 623-737, gnl|monDom2|scaffold_60 (5335014-5335143) | |
| 623-737, gnl|oryCun1|scaffold_203710 (171915-172025) | |
| 623-737, gnl|oryCun1|scaffold_203710 (172026-171926) | |
| 623-737, gnl|oryCun1|scaffold_203710 (172038-171907) | |
| 623-737, gnl|panTro1|chr4 (43792577-43792446) | |
| 623-737, gnl|panTro1|chr8 (92316636-92316733) | |
| 623-737, gnl|panTro1|chrUn_random (21392771-21392884) | |
| 623-737, gnl|rheMac2|chr7 (83229130-83229243) | |
| 623-737, gnl|rheMac2|chr7 (83229244-83229132) | |
| 623-737, gnl|rheMac2|chr9 (88453372-88453469) | |
| 623-737, gnl|rn3|chr2 (30243379-30243489) | |
| 623-737, gnl|rn3|chr2 (30243490-30243390) | |
| 623-737, gnl|rn3|chr2 (30243502-30243371) | |
| 623-737, gnl|tetNig1|chr4 (2979016-2979144) |