Ss1.1-Spl1-SPL01D060065.5
|
TGGTCATAGGGCTCGGGGAGCCCCAGAGGGGTTGAGGGGGGAAAAGAAAGATGTAGGGAG
CCATGGTTGGGGATGAGGTTAAAACGGTGACCTCTCTTGGTTTTCACTCTGAAGGTAGAA
GAAATCATTGAATCCCCCGCCTTCAGAAGAGGGTGCCTTTTCAGGAGGAAGCGATGGCTT
CAGACAGCATATTTGAGTCATTTCCTTCATACTCACAGTGCTTCATGAGAGGTGAGTACA
CTCTGGGCTTTTAAATCTACTTTTGCTCAGCTTTGCAGATACTGAAGTGGCAGCCTGTTG
GAACTCGGGGCAGAGAGCCCCTGTCTGTTTTGTGGGAGGAATTCAAACTCGGGCATATGA
TTACAAGGCTATTGGATTACTTATTCATCAGATGGCTGCTTTTCAGAAATGTTTTAAGAA
ATACCGTGTTAAGCTGTTGACGTGTTCCGTCGGTGCGTGAGCGCTTTGTCAAGTTCAAGT
GAATTAGGCTGCTCCCGATGAAAAGCCTAGAGATTATAAAGCCTGCAGGAAGCTCTCTGT
GTTTTCTTTGGTTGCCCCTGGCCTGAGAGGACGGTGGCTGAGTTGTCCTGAGTTCGGCGT
GCTGTGTGGCCCACACCCCAGCCTGGCCAGAGCTTTAGCGGGGCACATGCACAGCTGGCC
AAGGAGGGCTGGTGCCAGGGTGGTGCGGAGGCGGAGGTAGGCTTCCAGCCCGGGGAAGGA
ACAGCGGGGACAAAGCTGCAAGTCAGTTGTCTCCAAAAGGCAGAGAGTACAGTAGCCGGA
CAGGCTGGTCTAGGTTGAAAGCCCCAAGACGGGGCTGTGCTGGGTTACTCCTTGCAACCT
CAGTGCAATGAAGCAGCCGGCATC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGTCATAGGGCTCGGGGAGCCCCAGAGGGGTTGAGGGGGGAAAAGAAAGATGTAGGGAG
CCATGGTTGGGGATGAGGTTAAAACGGTGACCTCTCTTGGTTTTCACTCTGAAGGTAGAA
GAAATCATTGAATCCCCCGCCTTCAGAAGAGGGTGCCTTTTCAGGAGGAAGCGATGGCTT
CAGACAGCATATTTGAGTCATTTCCTTCATACTCACAGTGCTTCATGAGAGGTGAGTACA
CTCTGGGCTTTTAAATCTACTTTTGCTCAGCTTTGCAGATACTGAAGTGGCAGCCTGTTG
GAACTCGGGGCAGAGAGCCCCTGTCTGTTTTGTGGGAGGAATTCAAACTCGGGCATATGA
TTACAAGGCTATTGGATTACTTATTCATCAGATGGCTGCTTTTCAGAAATGTTTTAAGAA
ATACCGTGTTAAGCTGTTGACGTGTTCCGTCGGTGCGTGAGCGCTTTGTCAAGTTCAAGT
GAATTAGGCTGCTCCCGATGAAAAGCCTAGAGATTATAAAGCCTGCAGGAAGCTCTCTGT
GTTTTCTTTGGTTGCCCCTGGCCTGAGAGGACGGTGGCTGAGTTGTCCTGAGTTCGGCGT
GCTGTGTGGCCCACACCCCAGCCTGGCCAGAGCTTTAGCGGGGCACATGCACAGCTGGCC
AAGGAGGGCTGGTGCCAGGGTGGTGCGGAGGCGGAGGTAGGCTTCCAGCCCGGGGAAGGA
ACAGCGGGGACAAAGCTGCAAGTCAGTTGTCTCCAAAAGGCAGAGAGTACAGTAGCCGGA
CAGGCTGGTCTAGGTTGAAAGCCCCAAGACGGGGCTGTGCTGGGTTACTCCTTGCAACCT
CAGTGCAATGAAGCAGCCGGCATC
|
|
gi|13559512|gb|AAK29784.1| |
Protein identifier
|
gi|13559512|gb|AAK29784.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
52-864, gnl|bosTau2|chr1 (95667505-95668337) |
|
52-864, gnl|canFam2|chr31 (32537327-32538226) |
|
52-864, gnl|dasNov1|scaffold_10 (291963-291094) |
|
52-864, gnl|echTel1|scaffold_325394 (115367-114468) |
|
52-864, gnl|galGal2|chr1 (99888447-99889262) |
|
52-864, gnl|hg17|chr21 (35342048-35342916) |
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52-864, gnl|Hg17|chr21 (35343182-35342350) |
|
52-864, gnl|loxAfr1|scaffold_26827 (37468-38324) |
|
52-864, gnl|mm7|chr16 (92883083-92883924) |
|
52-864, gnl|Mm7|chr16 (92884180-92883366) |
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52-864, gnl|monDom2|scaffold_29 (12311331-12310442) |
|
52-864, gnl|panTro1|chr22 (35339735-35340603) |
|
52-864, gnl|rheMac2|chr3 (11523322-11522454) |
|
52-864, gnl|rn3|chr11_random (376239-375403) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
52-864, gnl|bosTau2|chr1 (95667505-95668337) |
|
52-864, gnl|canFam2|chr31 (32537327-32538226) |
|
52-864, gnl|dasNov1|scaffold_10 (291963-291094) |
|
52-864, gnl|echTel1|scaffold_325394 (115367-114468) |
|
52-864, gnl|galGal2|chr1 (99888447-99889262) |
|
52-864, gnl|hg17|chr21 (35342048-35342916) |
|
52-864, gnl|Hg17|chr21 (35343182-35342350) |
|
52-864, gnl|loxAfr1|scaffold_26827 (37468-38324) |
|
52-864, gnl|mm7|chr16 (92883083-92883924) |
|
52-864, gnl|Mm7|chr16 (92884180-92883366) |
|
52-864, gnl|monDom2|scaffold_29 (12311331-12310442) |
|
52-864, gnl|panTro1|chr22 (35339735-35340603) |
|
52-864, gnl|rheMac2|chr3 (11523322-11522454) |
|
52-864, gnl|rn3|chr11_random (376239-375403) |
