Non-Coding RNA Search

Ss1.1-Spl1-SPL01E010077.5

Sequence:


               
               ATTTGCTAACCTCGCAGTAGAGAGGAGTTGAGGGCGATGAGAGCGGGTACTGCGAACTGC
CGGGCGATGCCGCCGCTGCCGCCTTGATACCGAGAGCAACAGTTCCCCAGCAACACCCCC
CTCCCCGACACAGGCACACCCCCCGAGGAGGCACGCACACCCACCCCACGGCGCCCGGCT
CGGCAGCGCCCAGGAAATCCACCCTGCCCCACCACGCAGAGCCAGGAAGGAAAGAGAGCC
TCATGCCTAAGCCTCGGGGAGCACCATGGATCTGACAAAGATGGGCATGATCCAGCTGCA
GAACCCCAGCCACCCCACGGGGCTCCTGTGCAAGGCCAACCAGATGCGGCTGGCCGGGAT
GCTGTGCGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACCGTGCT
GGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGCAACAGCCAGCACTATACTCT
GGACTTCCTCTCTCCAAAGACCTTCCAGCAGATTCTGGAGTATGCATACACGGCCACACT
GCAAGCCAAGGCGGAAGACCTGGATGACCTGCTGTATGCAGCTGAGATCCTGGAGATTGA
GTACCTGGAGGAGCAGTGCCTGAAGATCCTGGAGACCATCCAAGCCTCAGACGACAATGA
CACGGAGGCCACCATGGCGGATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTGCTAACCTCGCAGTAGAGAGGAGTTGAGGGCGATGAGAGCGGGTACTGCGAACTGC
CGGGCGATGCCGCCGCTGCCGCCTTGATACCGAGAGCAACAGTTCCCCAGCAACACCCCC
CTCCCCGACACAGGCACACCCCCCGAGGAGGCACGCACACCCACCCCACGGCGCCCGGCT
CGGCAGCGCCCAGGAAATCCACCCTGCCCCACCACGCAGAGCCAGGAAGGAAAGAGAGCC
TCATGCCTAAGCCTCGGGGAGCACCATGGATCTGACAAAGATGGGCATGATCCAGCTGCA
GAACCCCAGCCACCCCACGGGGCTCCTGTGCAAGGCCAACCAGATGCGGCTGGCCGGGAT
GCTGTGCGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACCGTGCT
GGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGCAACAGCCAGCACTATACTCT
GGACTTCCTCTCTCCAAAGACCTTCCAGCAGATTCTGGAGTATGCATACACGGCCACACT
GCAAGCCAAGGCGGAAGACCTGGATGACCTGCTGTATGCAGCTGAGATCCTGGAGATTGA
GTACCTGGAGGAGCAGTGCCTGAAGATCCTGGAGACCATCCAAGCCTCAGACGACAATGA
CACGGAGGCCACCATGGCGGATGG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|3891926|pdb|1BUO|A

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3891926|pdb|1BUO|A

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               1-186, gnl|bosTau2|chr15 (11100162-11099979)
               

               
               1-186, gnl|Hg17|chr11 (113435628-113435812)
               

               
               1-186, gnl|Mm7|chr9 (48808237-48808043)
               


               
               188-684, gnl|bosTau2|chr15 (11096617-11096121)
               

               
               188-684, gnl|Hg17|chr11 (113439155-113439651)
               

               
               188-684, gnl|Mm7|chr9 (48805080-48804585)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-186, gnl|bosTau2|chr15 (11100162-11099979)
               

               
               1-186, gnl|Hg17|chr11 (113435628-113435812)
               

               
               1-186, gnl|Mm7|chr9 (48808237-48808043)
               


               
               188-684, gnl|bosTau2|chr15 (11096617-11096121)
               

               
               188-684, gnl|Hg17|chr11 (113439155-113439651)
               

               
               188-684, gnl|Mm7|chr9 (48805080-48804585)

	1-186, gnl\|bosTau2\|chr15 (11100162-11099979)
	1-186, gnl\|Hg17\|chr11 (113435628-113435812)
	1-186, gnl\|Mm7\|chr9 (48808237-48808043)

	188-684, gnl\|bosTau2\|chr15 (11096617-11096121)
	188-684, gnl\|Hg17\|chr11 (113439155-113439651)
	188-684, gnl\|Mm7\|chr9 (48805080-48804585)