Non-Coding RNA Search

Ss1.1-Spl1-SPL01F020054.5

Sequence:


               
               ACTGGATATTGTGATGTCAGCCAGGGACAAGACGCCCTCCTCACAGGTGAGCTTCTGAAA
GCTCGTTAGTTCTGAACCCAACGTGACACTCACCTGGCTGGGGTCCCCGTTACCTGCTGG
TAAAGTTGTTTCCTCCGCGAGCCGAGGATGTCTGGGACTCTTACACCTTTACAGCTCTCG
TTTTATTATCTAAAGACACTTGCCTTTTGACTTTTTTTTTTTTTTAACCTTCAGTTAGTT
TTTAACAAGACACTGCATTTCAAACATAGCAAACACGACAGAGATTACGGAACAAGGCCA
AGGCCGAGGCTGGAGTGACCTTGCACGACCGTTGTTGCCATCTGATGGTGGCTGGCAGAA
CTGATGCACTTTGAAGCTTTATTTATTGCACAGAAAGTCGAAAACTGAAAGCAGAGGACC
TGCCTTGCCCCCAGGGAGCTCAGGATGGGCAGCATAGAGGAAGAATGGAAGGAGAGGAAT
CTCTTGTGATCGAACATGATGGAAGATAATATGAGAAAAACAATGTGTGTGTGTATATGT
ATGTATATATATACGACTGGGTCACTTTGCTGTACAGCAGAAATTGACACAACACTGTAA
ATCAACTACACTTCATAAAAAAGGCGGAGGTAATGTGGATTTGCTTCATGCATCGGCACG
AGTCATCACTGGGTACCAGGAATCCATAGTTAATATAATTTTAGAGGGGTTTTTTAAGGT
ACGGTCTGGCATGCCCCTGGAAATCTAAAATCCATTTATGAGTCAGTTTGTCATTTCAGA
AAGACTCCCAGTGCATTGGGCTTTGGGAAATTAACAGAACAACAGGAGATCTCAGCTAAA
AACCAGTCTCTTCCATAGAATTAGCATGCAGCTGATATTTGTGAAATTTGATTAGTTAGG
GACACTTCTCATTCTAATCAAGGAAACTGAGACTCGATCAGTAAAATAGCCATTGTATTT
TATCGTCTTTCAAAGTGCTTTCAGATAACTGTACATCTGTTTCTGCACCAATCTATTTCA
GCCATTTTTCTTTCATCCCCTTTTCTGATACCAAACTGAGATTCCTAGAGATTAAGTTTC
CTGAGTGCACATATCTAGTGGATAATGAGAGCCAGAATTAGTCCAAGCAGCAGGGTTCGC
AACTCTCATTGCACAGAAGAATCACCTGGGAAACTTAAAAAATAAAATAAAATCCCATTG
GTGGGTCTCACTGCCATATATACTGATTTAATTAAGCAGGGCAAGGACTAGGTCATGGGT
TTCCCTTTTAGAACTGCAGCGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGATATTGTGATGTCAGCCAGGGACAAGACGCCCTCCTCACAGGTGAGCTTCTGAAA
GCTCGTTAGTTCTGAACCCAACGTGACACTCACCTGGCTGGGGTCCCCGTTACCTGCTGG
TAAAGTTGTTTCCTCCGCGAGCCGAGGATGTCTGGGACTCTTACACCTTTACAGCTCTCG
TTTTATTATCTAAAGACACTTGCCTTTTGACTTTTTTTTTTTTTTAACCTTCAGTTAGTT
TTTAACAAGACACTGCATTTCAAACATAGCAAACACGACAGAGATTACGGAACAAGGCCA
AGGCCGAGGCTGGAGTGACCTTGCACGACCGTTGTTGCCATCTGATGGTGGCTGGCAGAA
CTGATGCACTTTGAAGCTTTATTTATTGCACAGAAAGTCGAAAACTGAAAGCAGAGGACC
TGCCTTGCCCCCAGGGAGCTCAGGATGGGCAGCATAGAGGAAGAATGGAAGGAGAGGAAT
CTCTTGTGATCGAACATGATGGAAGATAATATGAGAAAAACAATGTGTGTGTGTATATGT
ATGTATATATATACGACTGGGTCACTTTGCTGTACAGCAGAAATTGACACAACACTGTAA
ATCAACTACACTTCATAAAAAAGGCGGAGGTAATGTGGATTTGCTTCATGCATCGGCACG
AGTCATCACTGGGTACCAGGAATCCATAGTTAATATAATTTTAGAGGGGTTTTTTAAGGT
ACGGTCTGGCATGCCCCTGGAAATCTAAAATCCATTTATGAGTCAGTTTGTCATTTCAGA
AAGACTCCCAGTGCATTGGGCTTTGGGAAATTAACAGAACAACAGGAGATCTCAGCTAAA
AACCAGTCTCTTCCATAGAATTAGCATGCAGCTGATATTTGTGAAATTTGATTAGTTAGG
GACACTTCTCATTCTAATCAAGGAAACTGAGACTCGATCAGTAAAATAGCCATTGTATTT
TATCGTCTTTCAAAGTGCTTTCAGATAACTGTACATCTGTTTCTGCACCAATCTATTTCA
GCCATTTTTCTTTCATCCCCTTTTCTGATACCAAACTGAGATTCCTAGAGATTAAGTTTC
CTGAGTGCACATATCTAGTGGATAATGAGAGCCAGAATTAGTCCAAGCAGCAGGGTTCGC
AACTCTCATTGCACAGAAGAATCACCTGGGAAACTTAAAAAATAAAATAAAATCCCATTG
GTGGGTCTCACTGCCATATATACTGATTTAATTAAGCAGGGCAAGGACTAGGTCATGGGT
TTCCCTTTTAGAACTGCAGCGATT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               10-451, gnl|bosTau2|chr19 (43465683-43465238)
               

               
               10-451, gnl|Hg17|chr17 (62901845-62902384)
               

               
               10-451, gnl|Mm7|chr11 (107503057-107502656)
               


               
               478-620, gnl|bosTau2|chr10 (39228197-39228338)
               


               
               768-1284, gnl|bosTau2|chr19 (43465243-43464747)
               

               
               768-1284, gnl|Hg17|chr17 (62902275-62903413)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-451, gnl|bosTau2|chr19 (43465683-43465238)
               

               
               10-451, gnl|Hg17|chr17 (62901845-62902384)
               

               
               10-451, gnl|Mm7|chr11 (107503057-107502656)
               


               
               478-620, gnl|bosTau2|chr10 (39228197-39228338)
               


               
               768-1284, gnl|bosTau2|chr19 (43465243-43464747)
               

               
               768-1284, gnl|Hg17|chr17 (62902275-62903413)

	10-451, gnl\|bosTau2\|chr19 (43465683-43465238)
	10-451, gnl\|Hg17\|chr17 (62901845-62902384)
	10-451, gnl\|Mm7\|chr11 (107503057-107502656)

	478-620, gnl\|bosTau2\|chr10 (39228197-39228338)

	768-1284, gnl\|bosTau2\|chr19 (43465243-43464747)
	768-1284, gnl\|Hg17\|chr17 (62902275-62903413)