Ss1.1-Spl1-SPL01F070070.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATCCAAGATGGCGGCGGGGATGGATTGGTTCCCGTGGTCCCTGCTGCTTCTCTCTCTCA CGTGTGATACAGGCGCCTTCTATGTTCCTGGGGTCGCACCAATCAACTTCCACCAGAATG ACCCTGTAGAAATCAAGGCTGTGAAGCTCACCAGCTCTCGAACCCAGCTACCTTATGAGT ACTACTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGAG AGGTGCTGAGAGGGGACCGGATTGTCAACACCCCTTTCCAGGTTTTCATGAACAGTGAAA AGAAGTGTGAGGTTCTGTGCAGCCAGTCCAACAAGCCGGTGACCCTGACCGTGGAGCAGA GCCGGCTCGTGGCCGAGCGAATCACAGAGGACTACTACGTCCACCTCATTGCGGACAACC TGCCTGTGGCCACCCGCCTGGAGCTCTACTCCAACCGCGACGGCGATGACAAGAAGAAAG AGAAAGATGTGCAGTTTGAACATGGCTACCGGCTCGGCTTCACAGATGTCAACAAGATCT ACCTGCACAATCACCTCTCGTTCATCCTCTACTACCACCGGGAGGACCTAGAAGAGGACC AGGAGCACACATACCGCGTCGTCCGCTTCGAGGTGATTCCCCAGAGCATCAGGCTGGAGG ACCTCAAAGCAGACGAGAAGGGGTCATGCACCCTGCCCGAGGGTACCAATTCCTCGCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATCCAAGATGGCGGCGGGGATGGATTGGTTCCCGTGGTCCCTGCTGCTTCTCTCTCTCA CGTGTGATACAGGCGCCTTCTATGTTCCTGGGGTCGCACCAATCAACTTCCACCAGAATG ACCCTGTAGAAATCAAGGCTGTGAAGCTCACCAGCTCTCGAACCCAGCTACCTTATGAGT ACTACTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGAG AGGTGCTGAGAGGGGACCGGATTGTCAACACCCCTTTCCAGGTTTTCATGAACAGTGAAA AGAAGTGTGAGGTTCTGTGCAGCCAGTCCAACAAGCCGGTGACCCTGACCGTGGAGCAGA GCCGGCTCGTGGCCGAGCGAATCACAGAGGACTACTACGTCCACCTCATTGCGGACAACC TGCCTGTGGCCACCCGCCTGGAGCTCTACTCCAACCGCGACGGCGATGACAAGAAGAAAG AGAAAGATGTGCAGTTTGAACATGGCTACCGGCTCGGCTTCACAGATGTCAACAAGATCT ACCTGCACAATCACCTCTCGTTCATCCTCTACTACCACCGGGAGGACCTAGAAGAGGACC AGGAGCACACATACCGCGTCGTCCGCTTCGAGGTGATTCCCCAGAGCATCAGGCTGGAGG ACCTCAAAGCAGACGAGAAGGGGTCATGCACCCTGCCCGAGGGTACCAATTCCTCGCCCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 237-355, + strand, RNAz p=0.643803 | |
| 291-406, - strand, RNAz p=0.58805 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 237-355, + strand, RNAz p=0.643803 | |
| 291-406, - strand, RNAz p=0.58805 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 23-138, gnl|bosTau2|chr4 (44077957-44078072) | |
| 23-138, gnl|Hg17|chr20 (30184476-30184591) | |
| 23-138, gnl|Mm7|chr2 (152919745-152919860) | |
| 237-406, gnl|bosTau2|chr13 (42377174-42377005) | |
| 237-406, gnl|canFam2|chr24 (24522746-24522906) | |
| 237-406, gnl|danRer3|chr21 (26981780-26981628) | |
| 237-406, gnl|dasNov1|scaffold_185640 (1375-1535) | |
| 237-406, gnl|echTel1|scaffold_162514 (1188-1348) | |
| 237-406, gnl|fr1|chrUn (272056873-272056730) | |
| 237-406, gnl|galGal2|chr20 (9686517-9686658) | |
| 237-406, gnl|hg17|chr20 (30192940-30193100) | |
| 237-406, gnl|Hg17|chr20 (30192960-30193129) | |
| 237-406, gnl|loxAfr1|scaffold_36626 (4386-4226) | |
| 237-406, gnl|mm7|chr2 (152928099-152928259) | |
| 237-406, gnl|Mm7|chr2 (152928119-152928288) | |
| 237-406, gnl|monDom2|scaffold_38 (911737-911577) | |
| 237-406, gnl|oryCun1|scaffold_203472 (18793-18633) | |
| 237-406, gnl|panTro1|chr21 (31890959-31891119) | |
| 237-406, gnl|rheMac2|chr10 (32431474-32431314) | |
| 237-406, gnl|rn3|chr3 (143442223-143442383) | |
| 237-406, gnl|tetNig1|chrUn_random (109859137-109859007) | |
| 237-406, gnl|xenTro1|scaffold_775 (41270-41421) | |
| 535-660, gnl|bosTau2|chr13 (42375556-42375431) | |
| 535-660, gnl|Hg17|chr20 (30194444-30194569) | |
| 535-660, gnl|Mm7|chr2 (152929809-152929934) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 23-138, gnl|bosTau2|chr4 (44077957-44078072) | |
| 23-138, gnl|Hg17|chr20 (30184476-30184591) | |
| 23-138, gnl|Mm7|chr2 (152919745-152919860) | |
| 237-406, gnl|bosTau2|chr13 (42377174-42377005) | |
| 237-406, gnl|canFam2|chr24 (24522746-24522906) | |
| 237-406, gnl|danRer3|chr21 (26981780-26981628) | |
| 237-406, gnl|dasNov1|scaffold_185640 (1375-1535) | |
| 237-406, gnl|echTel1|scaffold_162514 (1188-1348) | |
| 237-406, gnl|fr1|chrUn (272056873-272056730) | |
| 237-406, gnl|galGal2|chr20 (9686517-9686658) | |
| 237-406, gnl|hg17|chr20 (30192940-30193100) | |
| 237-406, gnl|Hg17|chr20 (30192960-30193129) | |
| 237-406, gnl|loxAfr1|scaffold_36626 (4386-4226) | |
| 237-406, gnl|mm7|chr2 (152928099-152928259) | |
| 237-406, gnl|Mm7|chr2 (152928119-152928288) | |
| 237-406, gnl|monDom2|scaffold_38 (911737-911577) | |
| 237-406, gnl|oryCun1|scaffold_203472 (18793-18633) | |
| 237-406, gnl|panTro1|chr21 (31890959-31891119) | |
| 237-406, gnl|rheMac2|chr10 (32431474-32431314) | |
| 237-406, gnl|rn3|chr3 (143442223-143442383) | |
| 237-406, gnl|tetNig1|chrUn_random (109859137-109859007) | |
| 237-406, gnl|xenTro1|scaffold_775 (41270-41421) | |
| 535-660, gnl|bosTau2|chr13 (42375556-42375431) | |
| 535-660, gnl|Hg17|chr20 (30194444-30194569) | |
| 535-660, gnl|Mm7|chr2 (152929809-152929934) |