Non-Coding RNA Search

Ss1.1-Spl1-SPL01G060051.5

Sequence:


               
               ACTACAGAACTAACTCTCAACACCTATATTTTTTTTCTGGGCCAAAGAATTTAGAATTTC
AGAAAAGAAGAGTATATCAGTAGGAATCCAGGAATCCCTTTTTAAAACGTGATGAGCAAA
GATAAAATTGTTCTGTTCTTCAAACTAGCCCTTCTATTCCAGGTTCTCCTGCTCCCAAGT
TTCCCTTTCCATTTGAGGAAAGACTATCTATATCAGAAACTCATGAAACCTCTAACAAAA
CTTTTGACCAGGGTTATGTACTTGAAATTTCAGCCTTTCATTTCTGGGCCTTAATGCACA
AAATCCAGAGTCTTTCCTCCTTAGATGTTTGTCGGGCATCAATGTTCATGCCCAAGTGTC
ACCCAGAAATGTGATGAACCTTTAAAAGAAGAAGATTCTAGAGAAAGACCCCTGTTCCCA
CAGGTGTGGCTCAGTCTTAGCTGCTGTGGACAGTTTTTCTGCAGTCTATCCAAAAGCTGT
CTTTATCATAAAAAGAAATAATAGTAGTGATGTTGAATTCATGTCAGCTTTTTATGGAAT
ATGTAACTCTCTCACTTCTGGCTTTTTAAACATCCTTAAAAACAGTTTAGAAAGGGTTAG
TAATAATGATGTTCACAGAGATTTTTGAATTTGCCAACTGAGCAAATAGTTGAATTAGGA
TTCAAATCCAAGAGTCGAAGAATTTTATTTCGGTTCTTGTGCTTTTTTCATTACAATAAA
ATTTAGGGGCTGATTTGCCTTCTTGTATGAAATAAGCCTAAAAAACAAACAAACAAACAA
ACAAACAACCCGGTACTACCTAAAGTGAGGAATCCTAAATAATTCATAGAAATATGATTT
TCCAAAATTATTCTCATCTTAAACTTTTAGATGGCAAGATCTCTCTGGTTGAAGCATTGG
GGTTAAAGTAATGTTTTAGTTTATCACTTTCCCTTACAGAAGTTGACCAATAGTGACCAT
TTTAATTTACCTTAAAAAGAATCAATGTCGGAGTTCCCGTCGTGGCGCAGTGGTTAAGGA
ATCCGACTAGGAACCATGAGGTTGCGGGTTCAGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTACAGAACTAACTCTCAACACCTATATTTTTTTTCTGGGCCAAAGAATTTAGAATTTC
AGAAAAGAAGAGTATATCAGTAGGAATCCAGGAATCCCTTTTTAAAACGTGATGAGCAAA
GATAAAATTGTTCTGTTCTTCAAACTAGCCCTTCTATTCCAGGTTCTCCTGCTCCCAAGT
TTCCCTTTCCATTTGAGGAAAGACTATCTATATCAGAAACTCATGAAACCTCTAACAAAA
CTTTTGACCAGGGTTATGTACTTGAAATTTCAGCCTTTCATTTCTGGGCCTTAATGCACA
AAATCCAGAGTCTTTCCTCCTTAGATGTTTGTCGGGCATCAATGTTCATGCCCAAGTGTC
ACCCAGAAATGTGATGAACCTTTAAAAGAAGAAGATTCTAGAGAAAGACCCCTGTTCCCA
CAGGTGTGGCTCAGTCTTAGCTGCTGTGGACAGTTTTTCTGCAGTCTATCCAAAAGCTGT
CTTTATCATAAAAAGAAATAATAGTAGTGATGTTGAATTCATGTCAGCTTTTTATGGAAT
ATGTAACTCTCTCACTTCTGGCTTTTTAAACATCCTTAAAAACAGTTTAGAAAGGGTTAG
TAATAATGATGTTCACAGAGATTTTTGAATTTGCCAACTGAGCAAATAGTTGAATTAGGA
TTCAAATCCAAGAGTCGAAGAATTTTATTTCGGTTCTTGTGCTTTTTTCATTACAATAAA
ATTTAGGGGCTGATTTGCCTTCTTGTATGAAATAAGCCTAAAAAACAAACAAACAAACAA
ACAAACAACCCGGTACTACCTAAAGTGAGGAATCCTAAATAATTCATAGAAATATGATTT
TCCAAAATTATTCTCATCTTAAACTTTTAGATGGCAAGATCTCTCTGGTTGAAGCATTGG
GGTTAAAGTAATGTTTTAGTTTATCACTTTCCCTTACAGAAGTTGACCAATAGTGACCAT
TTTAATTTACCTTAAAAAGAATCAATGTCGGAGTTCCCGTCGTGGCGCAGTGGTTAAGGA
ATCCGACTAGGAACCATGAGGTTGCGGGTTCAGTCC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               311-761, gnl|bosTau2|chr1 (34099775-34099331)
               

               
               311-761, gnl|Hg17|chr3 (115842874-115842425)
               

               
               311-761, gnl|Mm7|chr16 (43111563-43111984)
               


               
               786-984, gnl|bosTau2|chr1 (34099044-34098834)
               

               
               786-984, gnl|Mm7|chr16 (43112006-43112179)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               311-761, gnl|bosTau2|chr1 (34099775-34099331)
               

               
               311-761, gnl|Hg17|chr3 (115842874-115842425)
               

               
               311-761, gnl|Mm7|chr16 (43111563-43111984)
               


               
               786-984, gnl|bosTau2|chr1 (34099044-34098834)
               

               
               786-984, gnl|Mm7|chr16 (43112006-43112179)

	311-761, gnl\|bosTau2\|chr1 (34099775-34099331)
	311-761, gnl\|Hg17\|chr3 (115842874-115842425)
	311-761, gnl\|Mm7\|chr16 (43111563-43111984)

	786-984, gnl\|bosTau2\|chr1 (34099044-34098834)
	786-984, gnl\|Mm7\|chr16 (43112006-43112179)