Ss1.1-Spl1-SPL01G060068.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGTATCAGGCTCTGCGCGCGCTCTGGCTGCTGCCGCGTGTGGCTATGAGGTGCCCCGGG AACGGTGCTGTAGAGCCTTGCAGGATATTAAAGGAGCCGAGGTCCTCCATCCTTGCAAAA GATTTCGTAGAGGATGTGGGGAAAAGGAACCTCACAGATCATCGAGCCCAACCTTAGTCT TTTACAGGTTTTGATGCTGAGGAGGAAGACACTTTCCCAGCCTCATAATCTTCTGAAAGA CCTGGGCTTTTTTTTCCCCAAAATCGGGGCACTGTGCACCCCAAGGCCCGAGGTGAGGCG CCGCCACCTCCCCGACGGCGAGAGCCGAGCCAGGGGACGAAGCGGAAGTCCCGCGGACCC ACTGACTATACTGAAGAGAGACTCGCGGTGTCATGGCCGCCGACAGTGACGATGGCGCAG CCTCAGCTCCAGCCGTTTCTGACGGTGGTGTCCACCAAAGCACAAAATCTGAGGAGGAGC TGGCAATCCAGGTTCCCGTGGTGGATGTACAAAACGACAACTTCAAGGAAATGTGGCCGT CCCTCCTGCTGGCCATAAAGACAGCTAGCTTTGTGGCTGTGGACACGGAACTGAGTGGGC TTGGGGACCGGAAGAGTTTGCTGAACCAGTGCATCGAGGAACGTTACAAGGCCGTGTGTC ATGCTGCCAGGACCCGTTCCATCCTCTCCCTGGGCCTCGCTTGCTTTAAGCACCAGCCGG ACAAGGGTGACCATTCGTACCTGGTCCAGGTGTTCAATCTGACCCTGCTGTGCATGGAGG AGTATGTCATAGAACCAAAGTCCGTGCAGTTCCTGGTCCAGCATGGTTTCAACTTCAACC GGCAGTATGCCCAGGGCATCCCCTACCACAAGGGCAACGACAAGGGCGATGAGAGCCAGA GCCAGTCAGTGAGGACCCTGTTCCTGGAGCTGATCCGGGCCCGCCGGCCCCTGGTGTTGC ACAACGGTCTTATAGACCTGGTGTTCCTGTACCAGCACTTCTATGCGCACCTGCCCGAGA GCTTGGGAACCTTCACTGCTGACCTGTGTGAAATGTTCCCAGCTGGCATTTATGACACCA AATATGCTGCTGAGTTTCACGCCCGCTTTGTGGCCTCCTACCTAGAATATGCCTTCCGGA AATGTGAGCGGGAAAATGGAAAGCAGAGGGCAGCTGGCAGCCCACACCTTACCCTGGAGT TCTGCAGCTATCCTTCTAGCATGAGGGCCCACATTGACTATCGCTGCTGCATGCCCCCTG CAACCTACCGTCCCCATTCCACCAGCATCTGTGACAACTTCTCGGCCTACGGCTGGTGCC CCCTGGGACCACGTTGTCCTCGGTCCCATGATATTGACCTTATTATTGACACTGACGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGTATCAGGCTCTGCGCGCGCTCTGGCTGCTGCCGCGTGTGGCTATGAGGTGCCCCGGG AACGGTGCTGTAGAGCCTTGCAGGATATTAAAGGAGCCGAGGTCCTCCATCCTTGCAAAA GATTTCGTAGAGGATGTGGGGAAAAGGAACCTCACAGATCATCGAGCCCAACCTTAGTCT TTTACAGGTTTTGATGCTGAGGAGGAAGACACTTTCCCAGCCTCATAATCTTCTGAAAGA CCTGGGCTTTTTTTTCCCCAAAATCGGGGCACTGTGCACCCCAAGGCCCGAGGTGAGGCG CCGCCACCTCCCCGACGGCGAGAGCCGAGCCAGGGGACGAAGCGGAAGTCCCGCGGACCC ACTGACTATACTGAAGAGAGACTCGCGGTGTCATGGCCGCCGACAGTGACGATGGCGCAG CCTCAGCTCCAGCCGTTTCTGACGGTGGTGTCCACCAAAGCACAAAATCTGAGGAGGAGC TGGCAATCCAGGTTCCCGTGGTGGATGTACAAAACGACAACTTCAAGGAAATGTGGCCGT CCCTCCTGCTGGCCATAAAGACAGCTAGCTTTGTGGCTGTGGACACGGAACTGAGTGGGC TTGGGGACCGGAAGAGTTTGCTGAACCAGTGCATCGAGGAACGTTACAAGGCCGTGTGTC ATGCTGCCAGGACCCGTTCCATCCTCTCCCTGGGCCTCGCTTGCTTTAAGCACCAGCCGG ACAAGGGTGACCATTCGTACCTGGTCCAGGTGTTCAATCTGACCCTGCTGTGCATGGAGG AGTATGTCATAGAACCAAAGTCCGTGCAGTTCCTGGTCCAGCATGGTTTCAACTTCAACC GGCAGTATGCCCAGGGCATCCCCTACCACAAGGGCAACGACAAGGGCGATGAGAGCCAGA GCCAGTCAGTGAGGACCCTGTTCCTGGAGCTGATCCGGGCCCGCCGGCCCCTGGTGTTGC ACAACGGTCTTATAGACCTGGTGTTCCTGTACCAGCACTTCTATGCGCACCTGCCCGAGA GCTTGGGAACCTTCACTGCTGACCTGTGTGAAATGTTCCCAGCTGGCATTTATGACACCA AATATGCTGCTGAGTTTCACGCCCGCTTTGTGGCCTCCTACCTAGAATATGCCTTCCGGA AATGTGAGCGGGAAAATGGAAAGCAGAGGGCAGCTGGCAGCCCACACCTTACCCTGGAGT TCTGCAGCTATCCTTCTAGCATGAGGGCCCACATTGACTATCGCTGCTGCATGCCCCCTG CAACCTACCGTCCCCATTCCACCAGCATCTGTGACAACTTCTCGGCCTACGGCTGGTGCC CCCTGGGACCACGTTGTCCTCGGTCCCATGATATTGACCTTATTATTGACACTGACGAGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 962-1081, + strand, RNAz p=0.704644 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 962-1081, + strand, RNAz p=0.704644 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-284, gnl|bosTau2|chr3 (70447516-70447234) | |
| 1-284, gnl|Hg17|chr1 (45475395-45475682) | |
| 1-284, gnl|Mm7|chr4 (116183635-116183339) | |
| 446-616, gnl|bosTau2|chr3 (70447098-70446933) | |
| 446-616, gnl|Hg17|chr1 (45475839-45476004) | |
| 446-616, gnl|Mm7|chr4 (116183197-116183032) | |
| 883-1148, gnl|bosTau2|chr3 (70446033-70445767) | |
| 883-1148, gnl|canFam2|chr15 (18021827-18021541) | |
| 883-1148, gnl|danRer3|chr2 (18890131-18889854) | |
| 883-1148, gnl|echTel1|scaffold_286224 (7740-7454) | |
| 883-1148, gnl|fr1|chrUn (212334128-212333761) | |
| 883-1148, gnl|galGal2|chr8 (21288378-21288652) | |
| 883-1148, gnl|hg17|chr1 (45477140-45477426) | |
| 883-1148, gnl|Hg17|chr1 (45477147-45477413) | |
| 883-1148, gnl|loxAfr1|scaffold_82639 (1143-1429) | |
| 883-1148, gnl|mm7|chr4 (116182195-116181909) | |
| 883-1148, gnl|Mm7|chr4 (116182186-116181920) | |
| 883-1148, gnl|monDom2|scaffold_70 (7722480-7722207) | |
| 883-1148, gnl|oryCun1|scaffold_195070 (5103-4817) | |
| 883-1148, gnl|panTro1|chr1_random (65200409-65200123) | |
| 883-1148, gnl|rheMac2|chr1 (48257427-48257713) | |
| 883-1148, gnl|rn3|chr5 (137107195-137106909) | |
| 883-1148, gnl|tetNig1|chrUn_random (16275837-16276182) | |
| 883-1148, gnl|xenTro1|scaffold_1 (7581350-7581624) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-284, gnl|bosTau2|chr3 (70447516-70447234) | |
| 1-284, gnl|Hg17|chr1 (45475395-45475682) | |
| 1-284, gnl|Mm7|chr4 (116183635-116183339) | |
| 446-616, gnl|bosTau2|chr3 (70447098-70446933) | |
| 446-616, gnl|Hg17|chr1 (45475839-45476004) | |
| 446-616, gnl|Mm7|chr4 (116183197-116183032) | |
| 883-1148, gnl|bosTau2|chr3 (70446033-70445767) | |
| 883-1148, gnl|canFam2|chr15 (18021827-18021541) | |
| 883-1148, gnl|danRer3|chr2 (18890131-18889854) | |
| 883-1148, gnl|echTel1|scaffold_286224 (7740-7454) | |
| 883-1148, gnl|fr1|chrUn (212334128-212333761) | |
| 883-1148, gnl|galGal2|chr8 (21288378-21288652) | |
| 883-1148, gnl|hg17|chr1 (45477140-45477426) | |
| 883-1148, gnl|Hg17|chr1 (45477147-45477413) | |
| 883-1148, gnl|loxAfr1|scaffold_82639 (1143-1429) | |
| 883-1148, gnl|mm7|chr4 (116182195-116181909) | |
| 883-1148, gnl|Mm7|chr4 (116182186-116181920) | |
| 883-1148, gnl|monDom2|scaffold_70 (7722480-7722207) | |
| 883-1148, gnl|oryCun1|scaffold_195070 (5103-4817) | |
| 883-1148, gnl|panTro1|chr1_random (65200409-65200123) | |
| 883-1148, gnl|rheMac2|chr1 (48257427-48257713) | |
| 883-1148, gnl|rn3|chr5 (137107195-137106909) | |
| 883-1148, gnl|tetNig1|chrUn_random (16275837-16276182) | |
| 883-1148, gnl|xenTro1|scaffold_1 (7581350-7581624) |