Ss1.1-Spl1-SPL01H110080.5
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TTGTTGACAGCGGAGGCGGCGGCGGCTGCAGGCTCCGAGCCGTAGGAGCCGGATCGGGGG
AGGGGCCGGGCCCGGGAGCCAGCACCCGCCGGCCCTCAGCCCCGCCCGCAGCCCTAAGGG
CAAGGCTGTGGCTCTGCCAATGATCCTGTGAGTGTTGCAGAGGCACCGTTGCCCCTGGGG
GCCCCTGTCCCGGAGTGGCCCACTGCCTGCTCCCAGCATGGCGTCCGACACCCCCGAGTC
CCTGATGGCCCTCTGCACCGACTTCTGCCTGCGCAACCTGGACGGCACCCTGGGCTACCT
GCTGGACAAGGAGACCCTGCGGCTGCATCCAGACATCTTCCTGCCCAGCGAGATCTGTGA
CCGGCTCGTCAATGAGTATGTGGAGCTGGTCAATGCCGCCTGCAACTTTGAGCCCCACGA
GAGCTTCTTCAGCCTCTTCTCGGACCCCCGCAGCACCCGCCTCACCCGTATCCACCTCCG
AGAGGACCTGGTGCAGGACCAGGACCTGGAAGCCATCCGCAAGCAGGACCTGGTGGAGCT
GTACCTGACCAACTGTGAGAAGCTGTCCGCCAAGAGCCTGCAGACGCTCAGGAGCTTCAG
CCACACCCTGGTGTCCCTGAGCCTCTTCGGCTGCGCCAACATCTTCTACGAGGAAGAGAA
CCCGGGCGGCTGTGAAGACGAGTGCCTCGTCAACCCCACGTGCCAGGTGCTGGTCAAGGA
CTTCACCTTCGAGGGCTTTAGCCGCCTGCGCTTCCTCAACTTGGGCCGCATGATCGACGG
GGTCCCCGTGGAGTCCCTGCTGCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTGTTGACAGCGGAGGCGGCGGCGGCTGCAGGCTCCGAGCCGTAGGAGCCGGATCGGGGG
AGGGGCCGGGCCCGGGAGCCAGCACCCGCCGGCCCTCAGCCCCGCCCGCAGCCCTAAGGG
CAAGGCTGTGGCTCTGCCAATGATCCTGTGAGTGTTGCAGAGGCACCGTTGCCCCTGGGG
GCCCCTGTCCCGGAGTGGCCCACTGCCTGCTCCCAGCATGGCGTCCGACACCCCCGAGTC
CCTGATGGCCCTCTGCACCGACTTCTGCCTGCGCAACCTGGACGGCACCCTGGGCTACCT
GCTGGACAAGGAGACCCTGCGGCTGCATCCAGACATCTTCCTGCCCAGCGAGATCTGTGA
CCGGCTCGTCAATGAGTATGTGGAGCTGGTCAATGCCGCCTGCAACTTTGAGCCCCACGA
GAGCTTCTTCAGCCTCTTCTCGGACCCCCGCAGCACCCGCCTCACCCGTATCCACCTCCG
AGAGGACCTGGTGCAGGACCAGGACCTGGAAGCCATCCGCAAGCAGGACCTGGTGGAGCT
GTACCTGACCAACTGTGAGAAGCTGTCCGCCAAGAGCCTGCAGACGCTCAGGAGCTTCAG
CCACACCCTGGTGTCCCTGAGCCTCTTCGGCTGCGCCAACATCTTCTACGAGGAAGAGAA
CCCGGGCGGCTGTGAAGACGAGTGCCTCGTCAACCCCACGTGCCAGGTGCTGGTCAAGGA
CTTCACCTTCGAGGGCTTTAGCCGCCTGCGCTTCCTCAACTTGGGCCGCATGATCGACGG
GGTCCCCGTGGAGTCCCTGCTGCG
|
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gi|55960034|emb|CAI15408.1| |
Protein identifier
|
gi|55960034|emb|CAI15408.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
123-275, gnl|bosTau2|chr11 (78542490-78542338) |
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123-275, gnl|Hg17|chr9 (128597494-128597341) |
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123-275, gnl|Mm7|chr2 (30120794-30120659) |
| |
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517-804, gnl|bosTau2|chr11 (78540246-78539959) |
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517-804, gnl|canFam2|chr9 (58201083-58200692) |
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517-804, gnl|danRer3|chrNA (173072094-173072500) |
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517-804, gnl|dasNov1|scaffold_8128 (752-361) |
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517-804, gnl|echTel1|scaffold_265639 (4-395) |
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517-804, gnl|fr1|chrUn (260736376-260736776) |
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517-804, gnl|galGal2|chr17 (5492951-5492561) |
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517-804, gnl|hg17|chr9 (128595050-128595441) |
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517-804, gnl|Hg17|chr9 (128595443-128595156) |
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517-804, gnl|mm7|chr2 (30118026-30118416) |
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517-804, gnl|Mm7|chr2 (30118417-30118132) |
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517-804, gnl|monDom2|scaffold_51 (3313261-3313651) |
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517-804, gnl|oryCun1|scaffold_92424 (615-1005) |
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517-804, gnl|panTro1|chr11 (113433202-113433593) |
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517-804, gnl|rheMac2|chr15 (10105538-10105147) |
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517-804, gnl|rn3|chr3 (9116004-9116394) |
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517-804, gnl|tetNig1|chrUn_random (86788008-86787608) |
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517-804, gnl|xenTro1|scaffold_82 (201294-200900) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
123-275, gnl|bosTau2|chr11 (78542490-78542338) |
|
123-275, gnl|Hg17|chr9 (128597494-128597341) |
|
123-275, gnl|Mm7|chr2 (30120794-30120659) |
| |
|
517-804, gnl|bosTau2|chr11 (78540246-78539959) |
|
517-804, gnl|canFam2|chr9 (58201083-58200692) |
|
517-804, gnl|danRer3|chrNA (173072094-173072500) |
|
517-804, gnl|dasNov1|scaffold_8128 (752-361) |
|
517-804, gnl|echTel1|scaffold_265639 (4-395) |
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517-804, gnl|fr1|chrUn (260736376-260736776) |
|
517-804, gnl|galGal2|chr17 (5492951-5492561) |
|
517-804, gnl|hg17|chr9 (128595050-128595441) |
|
517-804, gnl|Hg17|chr9 (128595443-128595156) |
|
517-804, gnl|mm7|chr2 (30118026-30118416) |
|
517-804, gnl|Mm7|chr2 (30118417-30118132) |
|
517-804, gnl|monDom2|scaffold_51 (3313261-3313651) |
|
517-804, gnl|oryCun1|scaffold_92424 (615-1005) |
|
517-804, gnl|panTro1|chr11 (113433202-113433593) |
|
517-804, gnl|rheMac2|chr15 (10105538-10105147) |
|
517-804, gnl|rn3|chr3 (9116004-9116394) |
|
517-804, gnl|tetNig1|chrUn_random (86788008-86787608) |
|
517-804, gnl|xenTro1|scaffold_82 (201294-200900) |
