Non-Coding RNA Search

Ss1.1-Tes1-TES01A100051.5

Sequence:


               
               GACGAGTGGTCGGAACCTTATCCCCTCTCCTTCTCCTTCCCCTTCCCCTTCCCCTCCCAG
GATAGGCTGGCACCCGGCACCAGGGTTATCCCGTGGCTGCTGCGGCCTCAACTCCAACGG
GTCGGGGCACGGAGAGTCCAGACCGCTTCCAGGGCGAGCGCTCCTGATTGTGACATCACA
TCCATCCCCTTGGCGATGGAGCTTGTCACTAGGAAGGAAGACTCAGTCGGAGAATAGCCA
ACAAGATGGGTTACTGGGAGCGTCTCCTGAGTGGCACTGAGTGGAGGCATCAGGGGGTTG
GAGCCTTGTGAACAGGGAACCTGCCCCCCAACACTTGGAAGGACCTGGGTTTCAGTGATG
AGACATGGGGTATGATGTAACCCGTTTCCAGGGGGATGTTGATGAAGACCTTATTTGTCC
TATTTGCAGTGGAGTCTTGGAGGAGCCCGTCCAGGCGCCTCACTGTGAGCATGCTTTCTG
CAACGCCTGCATCACCCAGTGGTTCTCTCAGCAGCAGACGTGTCCGGTGGACCGAAGCGT
TGTGACGGTCGCCCACCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGTT
GCAGATTGCCTGCGACAACGCTGTGTTTGGCTGTAGTGCTATTGTTCGGCTTGACAACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACGAGTGGTCGGAACCTTATCCCCTCTCCTTCTCCTTCCCCTTCCCCTTCCCCTCCCAG
GATAGGCTGGCACCCGGCACCAGGGTTATCCCGTGGCTGCTGCGGCCTCAACTCCAACGG
GTCGGGGCACGGAGAGTCCAGACCGCTTCCAGGGCGAGCGCTCCTGATTGTGACATCACA
TCCATCCCCTTGGCGATGGAGCTTGTCACTAGGAAGGAAGACTCAGTCGGAGAATAGCCA
ACAAGATGGGTTACTGGGAGCGTCTCCTGAGTGGCACTGAGTGGAGGCATCAGGGGGTTG
GAGCCTTGTGAACAGGGAACCTGCCCCCCAACACTTGGAAGGACCTGGGTTTCAGTGATG
AGACATGGGGTATGATGTAACCCGTTTCCAGGGGGATGTTGATGAAGACCTTATTTGTCC
TATTTGCAGTGGAGTCTTGGAGGAGCCCGTCCAGGCGCCTCACTGTGAGCATGCTTTCTG
CAACGCCTGCATCACCCAGTGGTTCTCTCAGCAGCAGACGTGTCCGGTGGACCGAAGCGT
TGTGACGGTCGCCCACCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGTT
GCAGATTGCCTGCGACAACGCTGTGTTTGGCTGTAGTGCTATTGTTCGGCTTGACAACCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6X9Y2_HORSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6X9Y2_HORSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               162-341, + strand, RNAz p=0.868645

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               162-341, + strand, RNAz p=0.868645

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of BC032637, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC032637, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               125-341, gnl|bosTau2|chr5 (3784371-3784587)
               

               
               125-341, gnl|Hg17|chr12 (54896665-54896480)
               

               
               125-341, gnl|Mm7|chrX (74043629-74043412)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               125-341, gnl|bosTau2|chr5 (3784371-3784587)
               

               
               125-341, gnl|Hg17|chr12 (54896665-54896480)
               

               
               125-341, gnl|Mm7|chrX (74043629-74043412)

	125-341, gnl\|bosTau2\|chr5 (3784371-3784587)
	125-341, gnl\|Hg17\|chr12 (54896665-54896480)
	125-341, gnl\|Mm7\|chrX (74043629-74043412)