Non-Coding RNA Search

Ss1.1-Tes1-TES01B040004.5

Sequence:


               
               TTCATCATCATCTGAGGATTTCCCAAGGGCACAGGATGACTGTCTTCCCCATCAGTCTGG
GAACTCCTTGAGGGCAGGGCTAGTGCCTCCTCCTACAGACAGGGAGCTCCCTGGGGGAGG
GGCCTGTGCATCCATCCCTCTTCTCCATCAGATTTGGGCTGTGTTTCTCCTTCAAACTTT
GAGATCCTTGAGAGCAGAGCAGTATCTACCTCCTCTCCCTTTACCAGGAGCTTGGAGTTT
CAAGACCCTTCCTTCCTCCTTTCTCAGCAAGCCGTGTCTCCCCAGGTGTGTCCCTCGAGA
GAGTGTTCTCCAAAGTGCATCACTTTGAAGGGGAGACTCTGTCTGTGCAGTGCTCCTACA
AGGGCCGCAAACACCACATGGAGGGTAAGGCTTGGTGCAAAGTCAGACGGAAGAAGTGTG
AGACGGGGTTCCCCCGTGCGGGGGTGCAGGGGCCGCGCTATCTGCTGCAGGACGACACCC
GGGCCAAGGTGGTCACCATCACCATGGCGGCCCTGCGGCGCCAGGACTCGGGGCGGTACT
GGTGCATGCGCAACAGCTCCGGCACCCTCTACCCTCTGATGAGCTTCCTGCTGGAAGTGT
CTCCAGGTGAGCAGGCCTGCCGGGGCGCTGGGACGCTGGGGGCGGGGGGGTGGTGTCCTC
CCCACCCGCACTCCGCTGGCATCGGATGTAACAAGAATAAGAATCCCCCCACGGCCATGA
CGTACAGTGGGGTTTTCACAGTTCTTTCACAGACACCTTCGTGAGCATTCTGGCACCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCATCATCATCTGAGGATTTCCCAAGGGCACAGGATGACTGTCTTCCCCATCAGTCTGG
GAACTCCTTGAGGGCAGGGCTAGTGCCTCCTCCTACAGACAGGGAGCTCCCTGGGGGAGG
GGCCTGTGCATCCATCCCTCTTCTCCATCAGATTTGGGCTGTGTTTCTCCTTCAAACTTT
GAGATCCTTGAGAGCAGAGCAGTATCTACCTCCTCTCCCTTTACCAGGAGCTTGGAGTTT
CAAGACCCTTCCTTCCTCCTTTCTCAGCAAGCCGTGTCTCCCCAGGTGTGTCCCTCGAGA
GAGTGTTCTCCAAAGTGCATCACTTTGAAGGGGAGACTCTGTCTGTGCAGTGCTCCTACA
AGGGCCGCAAACACCACATGGAGGGTAAGGCTTGGTGCAAAGTCAGACGGAAGAAGTGTG
AGACGGGGTTCCCCCGTGCGGGGGTGCAGGGGCCGCGCTATCTGCTGCAGGACGACACCC
GGGCCAAGGTGGTCACCATCACCATGGCGGCCCTGCGGCGCCAGGACTCGGGGCGGTACT
GGTGCATGCGCAACAGCTCCGGCACCCTCTACCCTCTGATGAGCTTCCTGCTGGAAGTGT
CTCCAGGTGAGCAGGCCTGCCGGGGCGCTGGGACGCTGGGGGCGGGGGGGTGGTGTCCTC
CCCACCCGCACTCCGCTGGCATCGGATGTAACAAGAATAAGAATCCCCCCACGGCCATGA
CGTACAGTGGGGTTTTCACAGTTCTTTCACAGACACCTTCGTGAGCATTCTGGCACCATT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               39-158, + strand, RNAz p=0.964799

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               39-158, + strand, RNAz p=0.964799

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-769, gnl|bosTau2|chr23 (14196510-14197254)
               

               
               1-769, gnl|Hg17|chr6 (41274382-41273660)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-769, gnl|bosTau2|chr23 (14196510-14197254)
               

               
               1-769, gnl|Hg17|chr6 (41274382-41273660)

	1-769, gnl\|bosTau2\|chr23 (14196510-14197254)
	1-769, gnl\|Hg17\|chr6 (41274382-41273660)