Non-Coding RNA Search

Ss1.1-Tes1-TES01D020078.5

Sequence:


               
               TCTCCTCTGCTGCGTGGACAGTGGCAGATTGGGTTTGCTGTGCCCAGATCCTTCCCATTC
ACAAAGCGAAGTAGAAGACTGTGCTTCCTGGCTGGGAATTTATACAGGCTTAGGGAAAAG
ATGAACTGGCCCCATTCCTGCATCTCCTTTTGCTGGATTTACTTTGCTGCCTCCAGACTG
GGAGCCGTAGACACAGCAGATGGAAAATATGCTCAGAAGTTGTTTAACGACCTTTTTGAA
GATTATTCCAATGCTCTTCGTCCAGTAGAGGATACAGATAAAGTCCTGAATGTCACGCTC
CAGATTACACTTTCTCAGATTAAGGATATGGATGAAAGAAACCAAATTCTGACTGCCTAT
TTATGGATCCGCCAAATCTGGCACGACGCATATCTCACGTGGGATAGAGACATGTATGAT
GGACTGGACTCCATCAGGATCCCCAGCGACCTGGTGTGGAGGCCGGATATTGTCCTGTAT
AACAAGGCTGATGATGACTCTTCCGAGCCTGTGAACACCAATGTGGTCCTGCGGTATGAT
GGGCTGATCACCTGGGACGCACCGGCCATCACCAAAAGCTCCTGTGTGGTGGATGTCACC
TACTTCCCCTTTGATCATCAGCAGTGCAACCTGACCTTTGGTTCCTGGACCTACAATGGC
AATCAGGTGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCCTCTGCTGCGTGGACAGTGGCAGATTGGGTTTGCTGTGCCCAGATCCTTCCCATTC
ACAAAGCGAAGTAGAAGACTGTGCTTCCTGGCTGGGAATTTATACAGGCTTAGGGAAAAG
ATGAACTGGCCCCATTCCTGCATCTCCTTTTGCTGGATTTACTTTGCTGCCTCCAGACTG
GGAGCCGTAGACACAGCAGATGGAAAATATGCTCAGAAGTTGTTTAACGACCTTTTTGAA
GATTATTCCAATGCTCTTCGTCCAGTAGAGGATACAGATAAAGTCCTGAATGTCACGCTC
CAGATTACACTTTCTCAGATTAAGGATATGGATGAAAGAAACCAAATTCTGACTGCCTAT
TTATGGATCCGCCAAATCTGGCACGACGCATATCTCACGTGGGATAGAGACATGTATGAT
GGACTGGACTCCATCAGGATCCCCAGCGACCTGGTGTGGAGGCCGGATATTGTCCTGTAT
AACAAGGCTGATGATGACTCTTCCGAGCCTGTGAACACCAATGTGGTCCTGCGGTATGAT
GGGCTGATCACCTGGGACGCACCGGCCATCACCAAAAGCTCCTGTGTGGTGGATGTCACC
TACTTCCCCTTTGATCATCAGCAGTGCAACCTGACCTTTGGTTCCTGGACCTACAATGGC
AATCAGGTGGAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55623682|ref|XP_526777.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55623682|ref|XP_526777.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               183-369, gnl|bosTau2|chr6 (31177440-31177622)
               

               
               183-369, gnl|Hg17|chr4 (40178770-40178954)
               

               
               183-369, gnl|Mm7|chr5 (65322591-65322760)
               


               
               483-671, gnl|bosTau2|chr6 (31185754-31185942)
               

               
               483-671, gnl|Hg17|chr4 (40191824-40192012)
               

               
               483-671, gnl|Mm7|chr5 (65325624-65325812)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               183-369, gnl|bosTau2|chr6 (31177440-31177622)
               

               
               183-369, gnl|Hg17|chr4 (40178770-40178954)
               

               
               183-369, gnl|Mm7|chr5 (65322591-65322760)
               


               
               483-671, gnl|bosTau2|chr6 (31185754-31185942)
               

               
               483-671, gnl|Hg17|chr4 (40191824-40192012)
               

               
               483-671, gnl|Mm7|chr5 (65325624-65325812)

	183-369, gnl\|bosTau2\|chr6 (31177440-31177622)
	183-369, gnl\|Hg17\|chr4 (40178770-40178954)
	183-369, gnl\|Mm7\|chr5 (65322591-65322760)

	483-671, gnl\|bosTau2\|chr6 (31185754-31185942)
	483-671, gnl\|Hg17\|chr4 (40191824-40192012)
	483-671, gnl\|Mm7\|chr5 (65325624-65325812)