Ss1.1-Tes1-TES01F060044.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGCGCGGAGCTGGAGTCGGAGCCCGAGGCTGTGGCCGAGAGCGCGCGTCCCTCCGCCC CTCCCGGAGCTTTTTCCCGCCGCGTCCTCGTCCGGCCCGGCCCGGCCCGGCCTCCCCGTG GGGTCGCGCGGCCGCCCCGGGGACGATGAACGGAGGATAAATGGTGCCCAAGGCAGACAG CGGCGCCTTCCTGCTGCTTTTCCTTCTGGTGCTCACGGTCACCGAACCGCTGCGGCCAGA GCTGCGGTGCAATCCCGGGCAGTTTGCCTGTCGCAGTGGTGCCATCCAGTGCATCCCCCT CCCCTGGCAGTGTGACGGCTGGGTGACCTGTGAGGATGAGAGCGACGAAGCCGACTGCCC AGAAGTGATCGGGGAGTCTCGTCCTTACCATGGGAAGGAGGCTGTGGATCCAAGGCAGGG GCGGGCTCGAGGCGGCGACCCCACACACTTCCACACCATGAACGTGGCGCAGCCTGTCCG CTTCAGCAGGAAGTGCCCGACAGGGTGGCACCACTATGAGGGCACAGCCAGCTGCTACCG AGTCTACCTGAGCGGGGAGAACTACTGGGACGCCGCACAGACCTGCCAGCGTGTGAATGG GTCCCTCGCCATCTTCTCCACTGACCAGGAGCTGCGCTTTGTACTGGCCCAGGAATGGGA TCAGCCGGAGCGGAGCTTTGCCTGGCAGGACCAGCACAAGTTGTGGGTTGGCTACCAGTA TGTCTTCACTGGCCGGAACAGCTCCTTGGAAGGTCATTGGGAGGTGGCATTCAAAGGGTC CCCAGAGGTACTGCTACCCCCGGACCCCGGCCTGGCTGCAGCTGCGTCCGACAACAACGT CGTGCTCTGTGCGCAGCTCCAGCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGCGCGGAGCTGGAGTCGGAGCCCGAGGCTGTGGCCGAGAGCGCGCGTCCCTCCGCCC CTCCCGGAGCTTTTTCCCGCCGCGTCCTCGTCCGGCCCGGCCCGGCCCGGCCTCCCCGTG GGGTCGCGCGGCCGCCCCGGGGACGATGAACGGAGGATAAATGGTGCCCAAGGCAGACAG CGGCGCCTTCCTGCTGCTTTTCCTTCTGGTGCTCACGGTCACCGAACCGCTGCGGCCAGA GCTGCGGTGCAATCCCGGGCAGTTTGCCTGTCGCAGTGGTGCCATCCAGTGCATCCCCCT CCCCTGGCAGTGTGACGGCTGGGTGACCTGTGAGGATGAGAGCGACGAAGCCGACTGCCC AGAAGTGATCGGGGAGTCTCGTCCTTACCATGGGAAGGAGGCTGTGGATCCAAGGCAGGG GCGGGCTCGAGGCGGCGACCCCACACACTTCCACACCATGAACGTGGCGCAGCCTGTCCG CTTCAGCAGGAAGTGCCCGACAGGGTGGCACCACTATGAGGGCACAGCCAGCTGCTACCG AGTCTACCTGAGCGGGGAGAACTACTGGGACGCCGCACAGACCTGCCAGCGTGTGAATGG GTCCCTCGCCATCTTCTCCACTGACCAGGAGCTGCGCTTTGTACTGGCCCAGGAATGGGA TCAGCCGGAGCGGAGCTTTGCCTGGCAGGACCAGCACAAGTTGTGGGTTGGCTACCAGTA TGTCTTCACTGGCCGGAACAGCTCCTTGGAAGGTCATTGGGAGGTGGCATTCAAAGGGTC CCCAGAGGTACTGCTACCCCCGGACCCCGGCCTGGCTGCAGCTGCGTCCGACAACAACGT CGTGCTCTGTGCGCAGCTCCAGCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 584-701, + strand, RNAz p=0.512084 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 584-701, + strand, RNAz p=0.512084 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 237-362, gnl|bosTau2|chr17 (44430400-44430525) | |
| 237-362, gnl|canFam2|chr26 (33150691-33150529) | |
| 237-362, gnl|danRer3|chr10 (36169359-36169220) | |
| 237-362, gnl|dasNov1|scaffold_31346 (2653-2814) | |
| 237-362, gnl|echTel1|scaffold_203093 (803-691) | |
| 237-362, gnl|galGal2|chr15 (7840285-7840131) | |
| 237-362, gnl|hg17|chr22 (17451418-17451580) | |
| 237-362, gnl|Hg17|chr22 (17451560-17451435) | |
| 237-362, gnl|mm7|chr16 (17422284-17422440) | |
| 237-362, gnl|Mm7|chr16 (17422421-17422296) | |
| 237-362, gnl|monDom2|scaffold_141 (1666388-1666553) | |
| 237-362, gnl|oryCun1|scaffold_184586 (2313-2475) | |
| 237-362, gnl|panTro1|chr23 (17422090-17422252) | |
| 237-362, gnl|rheMac2|chr10 (63127521-63127683) | |
| 237-362, gnl|rn3|chr11 (85143103-85142948) | |
| 237-362, gnl|tetNig1|chr4 (1581423-1581292) | |
| 237-362, gnl|xenTro1|scaffold_169 (1517973-1518110) | |
| 489-701, gnl|bosTau2|chr17 (44440724-44440936) | |
| 489-701, gnl|canFam2|chr26 (33175850-33175612) | |
| 489-701, gnl|danRer3|chr10 (36175593-36175355) | |
| 489-701, gnl|dasNov1|scaffold_61649 (6184-6417) | |
| 489-701, gnl|echTel1|scaffold_194648 (6128-5905) | |
| 489-701, gnl|fr1|chrUn (42060819-42061048) | |
| 489-701, gnl|galGal2|chr15 (7850148-7849930) | |
| 489-701, gnl|hg17|chr22 (17426890-17427128) | |
| 489-701, gnl|Hg17|chr22 (17427125-17426913) | |
| 489-701, gnl|mm7|chr16 (17408083-17408306) | |
| 489-701, gnl|Mm7|chr16 (17408303-17408091) | |
| 489-701, gnl|monDom2|scaffold_141 (1654286-1654510) | |
| 489-701, gnl|oryCun1|scaffold_92615 (1692-1930) | |
| 489-701, gnl|panTro1|chr23 (17343858-17344096) | |
| 489-701, gnl|rheMac2|chr10 (63105850-63106088) | |
| 489-701, gnl|rn3|chr11 (85155788-85155565) | |
| 489-701, gnl|tetNig1|chr4 (1582657-1582439) | |
| 489-701, gnl|xenTro1|scaffold_169 (1512206-1512431) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 237-362, gnl|bosTau2|chr17 (44430400-44430525) | |
| 237-362, gnl|canFam2|chr26 (33150691-33150529) | |
| 237-362, gnl|danRer3|chr10 (36169359-36169220) | |
| 237-362, gnl|dasNov1|scaffold_31346 (2653-2814) | |
| 237-362, gnl|echTel1|scaffold_203093 (803-691) | |
| 237-362, gnl|galGal2|chr15 (7840285-7840131) | |
| 237-362, gnl|hg17|chr22 (17451418-17451580) | |
| 237-362, gnl|Hg17|chr22 (17451560-17451435) | |
| 237-362, gnl|mm7|chr16 (17422284-17422440) | |
| 237-362, gnl|Mm7|chr16 (17422421-17422296) | |
| 237-362, gnl|monDom2|scaffold_141 (1666388-1666553) | |
| 237-362, gnl|oryCun1|scaffold_184586 (2313-2475) | |
| 237-362, gnl|panTro1|chr23 (17422090-17422252) | |
| 237-362, gnl|rheMac2|chr10 (63127521-63127683) | |
| 237-362, gnl|rn3|chr11 (85143103-85142948) | |
| 237-362, gnl|tetNig1|chr4 (1581423-1581292) | |
| 237-362, gnl|xenTro1|scaffold_169 (1517973-1518110) | |
| 489-701, gnl|bosTau2|chr17 (44440724-44440936) | |
| 489-701, gnl|canFam2|chr26 (33175850-33175612) | |
| 489-701, gnl|danRer3|chr10 (36175593-36175355) | |
| 489-701, gnl|dasNov1|scaffold_61649 (6184-6417) | |
| 489-701, gnl|echTel1|scaffold_194648 (6128-5905) | |
| 489-701, gnl|fr1|chrUn (42060819-42061048) | |
| 489-701, gnl|galGal2|chr15 (7850148-7849930) | |
| 489-701, gnl|hg17|chr22 (17426890-17427128) | |
| 489-701, gnl|Hg17|chr22 (17427125-17426913) | |
| 489-701, gnl|mm7|chr16 (17408083-17408306) | |
| 489-701, gnl|Mm7|chr16 (17408303-17408091) | |
| 489-701, gnl|monDom2|scaffold_141 (1654286-1654510) | |
| 489-701, gnl|oryCun1|scaffold_92615 (1692-1930) | |
| 489-701, gnl|panTro1|chr23 (17343858-17344096) | |
| 489-701, gnl|rheMac2|chr10 (63105850-63106088) | |
| 489-701, gnl|rn3|chr11 (85155788-85155565) | |
| 489-701, gnl|tetNig1|chr4 (1582657-1582439) | |
| 489-701, gnl|xenTro1|scaffold_169 (1512206-1512431) |