Ss1.1-Thy1-THY010005C01.5
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AGGTTCGGAGCCAGTGGCTGGCCGGCCATGGAGGACTACGAGCGGCAGCTGTACGGTGTA
GAGGATGATGACTTCGACAGCCAGTTCGCAGCTGAGCTGGAGGTGCTGGCGGAGCTGGAA
GGAACAGCCGCCCTGACACCTTCCAGGAGCCTCCGGCCTGCCCCCACCATGGGCCGGCCC
CGCCTGACGTTCGAGGAGGCCATTGCTGGAGGGGACGCTGCCACTCACTGTTCTCCAGGC
AGACCTCCAAAAGGCGGTAGTGGCGGTGCCAAGAAGAGGCAGCTGACGGCTGACATTCAG
GGGACCATATCCCTGCCTCCTACCCCTAGGATCAAACGGTCCAGGCTGGAGGCCGCCAGG
AGGCTGAACTTCAGGCCCGACGAAATGGAAGATCTGCTGCCTCCTGATTCCCCCACTCGG
GACATCATTCTGCCACCGAGTCCTGAGGTCCCCGCTGAGCTGTGGGGCAGCGGACCCTCG
GACACTGGGGCTGAGGAGGGCTGCACCGGAGCCTCGCCAGCCGCCCGCAATCCTGTCCTG
AGGCGGCCCCCTGTGTTGGAGGACTACATCAACGTCACCTCCACGGGCGGCGACCGTGCT
TTTCTGGTGCTGAGGGATGACCCAGTGGGCACTGGGGTGCAGAGCCCTTTCCTTGACATC
CGGTGGCGTGGCCATGGCCATGGCCCGCTGGACCTG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGGTTCGGAGCCAGTGGCTGGCCGGCCATGGAGGACTACGAGCGGCAGCTGTACGGTGTA
GAGGATGATGACTTCGACAGCCAGTTCGCAGCTGAGCTGGAGGTGCTGGCGGAGCTGGAA
GGAACAGCCGCCCTGACACCTTCCAGGAGCCTCCGGCCTGCCCCCACCATGGGCCGGCCC
CGCCTGACGTTCGAGGAGGCCATTGCTGGAGGGGACGCTGCCACTCACTGTTCTCCAGGC
AGACCTCCAAAAGGCGGTAGTGGCGGTGCCAAGAAGAGGCAGCTGACGGCTGACATTCAG
GGGACCATATCCCTGCCTCCTACCCCTAGGATCAAACGGTCCAGGCTGGAGGCCGCCAGG
AGGCTGAACTTCAGGCCCGACGAAATGGAAGATCTGCTGCCTCCTGATTCCCCCACTCGG
GACATCATTCTGCCACCGAGTCCTGAGGTCCCCGCTGAGCTGTGGGGCAGCGGACCCTCG
GACACTGGGGCTGAGGAGGGCTGCACCGGAGCCTCGCCAGCCGCCCGCAATCCTGTCCTG
AGGCGGCCCCCTGTGTTGGAGGACTACATCAACGTCACCTCCACGGGCGGCGACCGTGCT
TTTCTGGTGCTGAGGGATGACCCAGTGGGCACTGGGGTGCAGAGCCCTTTCCTTGACATC
CGGTGGCGTGGCCATGGCCATGGCCCGCTGGACCTG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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120-321, gnl|bosTau2|chr25 (1132663-1132468) |
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120-321, gnl|Hg17|chr16 (778927-779125) |
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120-321, gnl|Mm7|chr17 (23910365-23910182) |
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331-468, gnl|bosTau2|chr25 (1132378-1132241) |
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331-468, gnl|canFam2|chr6 (42855806-42855591) |
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331-468, gnl|dasNov1|scaffold_148540 (1843-1651) |
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331-468, gnl|echTel1|scaffold_282782 (1568-1754) |
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331-468, gnl|galGal2|chr14 (8029457-8029268) |
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331-468, gnl|hg17|chr16 (779145-779330) |
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331-468, gnl|Hg17|chr16 (779219-779356) |
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331-468, gnl|loxAfr1|scaffold_58039 (12284-12469) |
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331-468, gnl|mm7|chr17 (23910164-23909974) |
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331-468, gnl|Mm7|chr17 (23910080-23909946) |
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331-468, gnl|monDom2|scaffold_292 (206348-206530) |
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331-468, gnl|rheMac2|chr20 (784275-784460) |
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331-468, gnl|rn3|chr10 (14995683-14995493) |
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331-468, gnl|xenTro1|scaffold_2345 (30605-30760) |
| |
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475-642, gnl|bosTau2|chr25 (1132096-1131929) |
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475-642, gnl|Hg17|chr16 (779549-779716) |
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475-642, gnl|Mm7|chr17 (23909788-23909615) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
120-321, gnl|bosTau2|chr25 (1132663-1132468) |
|
120-321, gnl|Hg17|chr16 (778927-779125) |
|
120-321, gnl|Mm7|chr17 (23910365-23910182) |
| |
|
331-468, gnl|bosTau2|chr25 (1132378-1132241) |
|
331-468, gnl|canFam2|chr6 (42855806-42855591) |
|
331-468, gnl|dasNov1|scaffold_148540 (1843-1651) |
|
331-468, gnl|echTel1|scaffold_282782 (1568-1754) |
|
331-468, gnl|galGal2|chr14 (8029457-8029268) |
|
331-468, gnl|hg17|chr16 (779145-779330) |
|
331-468, gnl|Hg17|chr16 (779219-779356) |
|
331-468, gnl|loxAfr1|scaffold_58039 (12284-12469) |
|
331-468, gnl|mm7|chr17 (23910164-23909974) |
|
331-468, gnl|Mm7|chr17 (23910080-23909946) |
|
331-468, gnl|monDom2|scaffold_292 (206348-206530) |
|
331-468, gnl|rheMac2|chr20 (784275-784460) |
|
331-468, gnl|rn3|chr10 (14995683-14995493) |
|
331-468, gnl|xenTro1|scaffold_2345 (30605-30760) |
| |
|
475-642, gnl|bosTau2|chr25 (1132096-1131929) |
|
475-642, gnl|Hg17|chr16 (779549-779716) |
|
475-642, gnl|Mm7|chr17 (23909788-23909615) |
