Non-Coding RNA Search

Ss1.1-Thy1-THY010007D09.5

Sequence:


               
               GCGGCCGCTGAGAGACACGCCTTCTTCTCACACAAAACCTTCCAGATCCCGGCGTCTCGG
CGGACTCGGGGTGGTGCTACAAGTCCTGCCACTTGCAGTCCTGACGGGCAGGGGCTGGGG
GCCGGCTGGCCGGCGTTGGATCGATCCAGCGCCACAGGTTGGAAACACAGGCGCTGTCCC
CAGGACTGTTGCCCTGGAAGGGAGATCCCAGGGCGATTGCCGCTGTCGGAGCCCAGGACT
TCCAGGGCTCAGGCAAGGGGAAGGCAACCTCTGAAACCTGACACCTCTCGCCCAGGAAAC
TTCACAGGCTGGCCCACCAAGACCATCACTATGACCGATGGGGACTATGATTATCTGATC
AAACTCCTGGCCCTTGGAGATTCCGGGGTGGGGAAGACGACATTTCTTTATCGATACACA
GATAATAAATTCAATCCCAAGTTCATCACAACAGCAGGGATAGATTTTCGGGAAAAACGT
GTGGTGAGTTTTTAACCGTACTGTTAACTTGTCGCAGATCCTACTATATGAAATAGGAAT
TAAGAAGCTGTGCTTTGGGACACTCCAAGTGTCTGTCGATTCCGGAGCGAAATTCGTAAC
CTGTCACTTAAATCCAATTAGAATTTATTAATGTTCGACCTCACCAGTCAACAGAGCTTC
TTAAATGACAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCGCTGAGAGACACGCCTTCTTCTCACACAAAACCTTCCAGATCCCGGCGTCTCGG
CGGACTCGGGGTGGTGCTACAAGTCCTGCCACTTGCAGTCCTGACGGGCAGGGGCTGGGG
GCCGGCTGGCCGGCGTTGGATCGATCCAGCGCCACAGGTTGGAAACACAGGCGCTGTCCC
CAGGACTGTTGCCCTGGAAGGGAGATCCCAGGGCGATTGCCGCTGTCGGAGCCCAGGACT
TCCAGGGCTCAGGCAAGGGGAAGGCAACCTCTGAAACCTGACACCTCTCGCCCAGGAAAC
TTCACAGGCTGGCCCACCAAGACCATCACTATGACCGATGGGGACTATGATTATCTGATC
AAACTCCTGGCCCTTGGAGATTCCGGGGTGGGGAAGACGACATTTCTTTATCGATACACA
GATAATAAATTCAATCCCAAGTTCATCACAACAGCAGGGATAGATTTTCGGGAAAAACGT
GTGGTGAGTTTTTAACCGTACTGTTAACTTGTCGCAGATCCTACTATATGAAATAGGAAT
TAAGAAGCTGTGCTTTGGGACACTCCAAGTGTCTGTCGATTCCGGAGCGAAATTCGTAAC
CTGTCACTTAAATCCAATTAGAATTTATTAATGTTCGACCTCACCAGTCAACAGAGCTTC
TTAAATGACAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|57032017|ref|XP_541092.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57032017|ref|XP_541092.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               303-628, gnl|bosTau2|chr24 (35387475-35387152)
               

               
               303-628, gnl|Hg17|chr18 (50695791-50696111)
               

               
               303-628, gnl|Mm7|chr18 (70387909-70387624)
               


               
               305-486, gnl|bosTau2|chr18 (28548708-28548528)
               

               
               305-486, gnl|Hg17|chr15 (53314449-53309974)
               

               
               305-486, gnl|Mm7|chr9 (73107889-73114903)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               303-628, gnl|bosTau2|chr24 (35387475-35387152)
               

               
               303-628, gnl|Hg17|chr18 (50695791-50696111)
               

               
               303-628, gnl|Mm7|chr18 (70387909-70387624)
               


               
               305-486, gnl|bosTau2|chr18 (28548708-28548528)
               

               
               305-486, gnl|Hg17|chr15 (53314449-53309974)
               

               
               305-486, gnl|Mm7|chr9 (73107889-73114903)

	303-628, gnl\|bosTau2\|chr24 (35387475-35387152)
	303-628, gnl\|Hg17\|chr18 (50695791-50696111)
	303-628, gnl\|Mm7\|chr18 (70387909-70387624)

	305-486, gnl\|bosTau2\|chr18 (28548708-28548528)
	305-486, gnl\|Hg17\|chr15 (53314449-53309974)
	305-486, gnl\|Mm7\|chr9 (73107889-73114903)