Ss1.1-Thy1-THY010009E07.5
               |  | CCCGTATACTGGACAGCAGAAGGGGAGAAGGGATTTATGAGGACCGACAAAAAAAGAGCT
TGTTAGGAGTCAAACAAAATAATAAGTCCAGCACTAGAGCTCCTCTCATCGCCAAAGCAA
AGATGGCCCTGATGAGCAGGCCAAGGGCTGCTCTGAAGACAAAGGGGTCACCAAGGAGTC
AAGAGAGAAGGATCCTGGCAGGATAAAACTCGAAAGAGGTCCAGCGTTTCCAGTGGTAGG
AGCAGCACCAGGTGTCGGTCCAGCGCAGGCTCCAGCAGCCGCTCTAGCGCCTGGCAGCAA
GCTGCTCAGGAAGCTGCGGCACATTCTGCAGCCCCAGCACCTGCAGTTCCTCTGGCCTTC
AGACCTGACAACAGGCGGCGTTCCTGCCCCATACCCACACCCCGAAAAAGAGATGGAAAG
GAAAGGAAACCCACTGAAGTGCACACTGGGAGGCTCCCCAGGAAGGTGACCATGGATCCC
ATTGTGGAGATATTCTCTACCCAGGGAAAATTTAAATGATGGACATGCCTGTAGAAAAGA
TGCACCCTTATGGGTCTAAAGGCTACGCATACGTGGAGCTTGAGAATCCAGATGAAGCAG
AGAAGGTGTTGAAGCACAAATGGAGGACAAATCGATGGCCACCACTGTGCTGGTCCCCTA
GCCTGGGCCACCCTTGGGGAATTCTGCCCTTCCAGGAGAACGCGGCACAGGTCACCCCCA
TCGATGAGGAGGTCACGCGCCCCTCCTTGCAGGTTCCCCTGACTATTCCAGTGGCCACAG
GAGCCACTCCAGCTCCACCTCCTCTGACAAGCAGGGCTACTGAAGCTTGACCACTGTGAC
TCGTATCCCATCGAACTCACTTCTGTCACTTTTCTGGATGAAGGAGTAGCAAACAGGAAG
AGGTCCCTCACT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CCCGTATACTGGACAGCAGAAGGGGAGAAGGGATTTATGAGGACCGACAAAAAAAGAGCT
TGTTAGGAGTCAAACAAAATAATAAGTCCAGCACTAGAGCTCCTCTCATCGCCAAAGCAA
AGATGGCCCTGATGAGCAGGCCAAGGGCTGCTCTGAAGACAAAGGGGTCACCAAGGAGTC
AAGAGAGAAGGATCCTGGCAGGATAAAACTCGAAAGAGGTCCAGCGTTTCCAGTGGTAGG
AGCAGCACCAGGTGTCGGTCCAGCGCAGGCTCCAGCAGCCGCTCTAGCGCCTGGCAGCAA
GCTGCTCAGGAAGCTGCGGCACATTCTGCAGCCCCAGCACCTGCAGTTCCTCTGGCCTTC
AGACCTGACAACAGGCGGCGTTCCTGCCCCATACCCACACCCCGAAAAAGAGATGGAAAG
GAAAGGAAACCCACTGAAGTGCACACTGGGAGGCTCCCCAGGAAGGTGACCATGGATCCC
ATTGTGGAGATATTCTCTACCCAGGGAAAATTTAAATGATGGACATGCCTGTAGAAAAGA
TGCACCCTTATGGGTCTAAAGGCTACGCATACGTGGAGCTTGAGAATCCAGATGAAGCAG
AGAAGGTGTTGAAGCACAAATGGAGGACAAATCGATGGCCACCACTGTGCTGGTCCCCTA
GCCTGGGCCACCCTTGGGGAATTCTGCCCTTCCAGGAGAACGCGGCACAGGTCACCCCCA
TCGATGAGGAGGTCACGCGCCCCTCCTTGCAGGTTCCCCTGACTATTCCAGTGGCCACAG
GAGCCACTCCAGCTCCACCTCCTCTGACAAGCAGGGCTACTGAAGCTTGACCACTGTGAC
TCGTATCCCATCGAACTCACTTCTGTCACTTTTCTGGATGAAGGAGTAGCAAACAGGAAG
AGGTCCCTCACT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map