Non-Coding RNA Search

Ss1.1-Thy1-THY010010G03.5

Sequence:


               
               AGCTTCCGGAAACCCTTGTCGACCCGCTTATCTCACTTTGCGCCTCTACCCAGACGCGAG
CGGCGCCTTTAAGGCTCCCGGAAACGAGCCAGAACAACCGGAAGTGACCCTCGTTAGTTC
CCCTCTTCACGTGGTGCGGGCCGGAAGTGACGCGCGGGGCCCGGGAGCTGCCGACGCGGA
GGCCAACGGAGCCGGAGTAGCGGACGCCGCGGGGTCTCCGGGACAGGAACCCCCAGTGGC
GTTTTCTGCAGGGGAAGTTTGCTGGGACCCTGGCTCCACTCAACCAGCAGAATGTCAGCC
ACACTGGATCTGAAATCGAAGGAGGAGAAGGATGCTGAGCTGGACAAGAGGATCGAGGCT
CTTCGGCGGAAGAATGAGGCCCTCATCCGGCGCTACCAGGAGATCGAGGAGGACCGTAAA
AAAGCTGAACTCGAGGGAGTGGCGGTGACAGCGCCGCGGAAGGGCCGCTCGGTGGAGAAG
GAGAATGTGGCAGTGGGAACGGAAAAGACCCTGGGTCCCTCCCGGAGGTCTCCTGGGACC
CCTCGGCCCCCTGGGGCCAGCAAGGGAGGCCGGATCCCCCCACAGCAGGGAGGCCGCGCA
GGCATGGGCCGGGCCTCCCGCAGCTGGGAAGACAGTCCTGGGGAGCAGCTTCGAGGAGGA
GCTGGGGGCCGAGGCCGGAGGGGTCGGGGTAGGGGATCCCCGCGTCTTGCTGGAGCTGGA
GATGCCTCGACTGCCGACCGCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTTCCGGAAACCCTTGTCGACCCGCTTATCTCACTTTGCGCCTCTACCCAGACGCGAG
CGGCGCCTTTAAGGCTCCCGGAAACGAGCCAGAACAACCGGAAGTGACCCTCGTTAGTTC
CCCTCTTCACGTGGTGCGGGCCGGAAGTGACGCGCGGGGCCCGGGAGCTGCCGACGCGGA
GGCCAACGGAGCCGGAGTAGCGGACGCCGCGGGGTCTCCGGGACAGGAACCCCCAGTGGC
GTTTTCTGCAGGGGAAGTTTGCTGGGACCCTGGCTCCACTCAACCAGCAGAATGTCAGCC
ACACTGGATCTGAAATCGAAGGAGGAGAAGGATGCTGAGCTGGACAAGAGGATCGAGGCT
CTTCGGCGGAAGAATGAGGCCCTCATCCGGCGCTACCAGGAGATCGAGGAGGACCGTAAA
AAAGCTGAACTCGAGGGAGTGGCGGTGACAGCGCCGCGGAAGGGCCGCTCGGTGGAGAAG
GAGAATGTGGCAGTGGGAACGGAAAAGACCCTGGGTCCCTCCCGGAGGTCTCCTGGGACC
CCTCGGCCCCCTGGGGCCAGCAAGGGAGGCCGGATCCCCCCACAGCAGGGAGGCCGCGCA
GGCATGGGCCGGGCCTCCCGCAGCTGGGAAGACAGTCCTGGGGAGCAGCTTCGAGGAGGA
GCTGGGGGCCGAGGCCGGAGGGGTCGGGGTAGGGGATCCCCGCGTCTTGCTGGAGCTGGA
GATGCCTCGACTGCCGACCGCAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|47230293|emb|CAG10707.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47230293|emb|CAG10707.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               294-400, gnl|bosTau2|chr18 (47254925-47255031)
               

               
               294-400, gnl|Hg17|chr19 (52453655-52453761)
               

               
               294-400, gnl|Mm7|chr7 (14046780-14046674)
               


               
               501-744, gnl|bosTau2|chr18 (47257026-47257269)
               

               
               501-744, gnl|Hg17|chr19 (52455684-52455930)
               

               
               501-744, gnl|Mm7|chr7 (14045010-14044767)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               294-400, gnl|bosTau2|chr18 (47254925-47255031)
               

               
               294-400, gnl|Hg17|chr19 (52453655-52453761)
               

               
               294-400, gnl|Mm7|chr7 (14046780-14046674)
               


               
               501-744, gnl|bosTau2|chr18 (47257026-47257269)
               

               
               501-744, gnl|Hg17|chr19 (52455684-52455930)
               

               
               501-744, gnl|Mm7|chr7 (14045010-14044767)

	294-400, gnl\|bosTau2\|chr18 (47254925-47255031)
	294-400, gnl\|Hg17\|chr19 (52453655-52453761)
	294-400, gnl\|Mm7\|chr7 (14046780-14046674)

	501-744, gnl\|bosTau2\|chr18 (47257026-47257269)
	501-744, gnl\|Hg17\|chr19 (52455684-52455930)
	501-744, gnl\|Mm7\|chr7 (14045010-14044767)