Ss1.1-Thy1-THY010022E08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATATAACCGCGGAGGGCTGGCGCCCAGTCGGCTGTGTTCGCCAACGCTATGAGTTCCTTC GAGGGCCAGATGGCGGAGTACCCAACTATCTCCATAGACCGTTTCGACCGGGAGAATCTG AGGGCTCGCGCTTATTTCCTGTCCCACTGCCACAAGGATCACATGAAAGGATTAAGAGCC TCTACCTTGAAAAGAAGGTTGGAGTGCAGCTTGAAGGTCTCCTTATACTGTTCACCTGTT ACTAGAGAATTGTTATTAACCAACCCGAGGTACAGATTTTGGGAGAAACGAATTGTAAGT TTTATTTTTTTCGAATGCCACTAATTCTTTTTTTCAAGTGGGAACTACTTTTCGAGGGAG ATGGAACAAATGTATAAATATATTTATCTGCAGTATTTATGGTGTCGCTATTCACTCTTT TGTCATTCCTTAATTGTGGAAGAGCTTGGCTTTTTATTGTTGTCACTTTGTCTTTCTTGT CCTTGAACACGTTGACCTAGATTCTTAGTTTTGTCTCGTCTCAAAGACCCTCTTGCCCAG CTGCATTTTAATAGTTTAAAGCATAAAATGTTCAGTGACATAATCGATAGATCCTTTTAT TTAGACCATGGGTTAGGTGAGGAAAAATGAAGAGGACTTAGGAGTTATAATAAGAAAGGA ATAATAAGCTGAATAAAAACAGGATGGATAATTTGAATCTGACAGAATAAAGTGGATCTC TGCAGTGGGAGGCGGATAGTAGAGGAGAGAAGACCATATGGCAGGTAGAATATGTGAAGA TGGCAGAAAAATTTCTGTTGCAACAGTAGTTGCTATCCACATGAATGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATATAACCGCGGAGGGCTGGCGCCCAGTCGGCTGTGTTCGCCAACGCTATGAGTTCCTTC GAGGGCCAGATGGCGGAGTACCCAACTATCTCCATAGACCGTTTCGACCGGGAGAATCTG AGGGCTCGCGCTTATTTCCTGTCCCACTGCCACAAGGATCACATGAAAGGATTAAGAGCC TCTACCTTGAAAAGAAGGTTGGAGTGCAGCTTGAAGGTCTCCTTATACTGTTCACCTGTT ACTAGAGAATTGTTATTAACCAACCCGAGGTACAGATTTTGGGAGAAACGAATTGTAAGT TTTATTTTTTTCGAATGCCACTAATTCTTTTTTTCAAGTGGGAACTACTTTTCGAGGGAG ATGGAACAAATGTATAAATATATTTATCTGCAGTATTTATGGTGTCGCTATTCACTCTTT TGTCATTCCTTAATTGTGGAAGAGCTTGGCTTTTTATTGTTGTCACTTTGTCTTTCTTGT CCTTGAACACGTTGACCTAGATTCTTAGTTTTGTCTCGTCTCAAAGACCCTCTTGCCCAG CTGCATTTTAATAGTTTAAAGCATAAAATGTTCAGTGACATAATCGATAGATCCTTTTAT TTAGACCATGGGTTAGGTGAGGAAAAATGAAGAGGACTTAGGAGTTATAATAAGAAAGGA ATAATAAGCTGAATAAAAACAGGATGGATAATTTGAATCTGACAGAATAAAGTGGATCTC TGCAGTGGGAGGCGGATAGTAGAGGAGAGAAGACCATATGGCAGGTAGAATATGTGAAGA TGGCAGAAAAATTTCTGTTGCAACAGTAGTTGCTATCCACATGAATGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 562-680, + strand, RNAz p=0.988656 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 562-680, + strand, RNAz p=0.988656 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 36-155, gnl|bosTau2|chr13 (17322632-17322751) | |
| 36-155, gnl|canFam2|chr2 (24523263-24523145) | |
| 36-155, gnl|danRer3|chr4 (9842049-9842163) | |
| 36-155, gnl|dasNov1|scaffold_56447 (5717-5835) | |
| 36-155, gnl|echTel1|scaffold_107263 (844-726) | |
| 36-155, gnl|fr1|chrUn (221517373-221517260) | |
| 36-155, gnl|galGal2|chrUn (52281137-52281021) | |
| 36-155, gnl|hg17|chr10 (15035901-15036019) | |
| 36-155, gnl|Hg17|chr10 (15036027-15035909) | |
| 36-155, gnl|loxAfr1|scaffold_5226 (34692-34574) | |
| 36-155, gnl|mm7|chr2 (3341606-3341488) | |
| 36-155, gnl|Mm7|chr2 (3341477-3341596) | |
| 36-155, gnl|monDom2|scaffold_30 (14399641-14399759) | |
| 36-155, gnl|oryCun1|scaffold_189060 (59614-59500) | |
| 36-155, gnl|panTro1|chr8 (15563073-15563195) | |
| 36-155, gnl|rheMac2|chr9 (15229495-15229613) | |
| 36-155, gnl|rn3|chr17 (85939340-85939458) | |
| 36-155, gnl|tetNig1|chr19 (1211791-1211906) | |
| 207-370, gnl|bosTau2|chr13 (17334333-17334494) | |
| 207-370, gnl|Hg17|chr10 (15027197-15027040) | |
| 207-370, gnl|Mm7|chr2 (3346537-3346716) | |
| 377-828, gnl|bosTau2|chr13 (17334527-17334972) | |
| 377-828, gnl|Hg17|chr10 (15027012-15025915) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 36-155, gnl|bosTau2|chr13 (17322632-17322751) | |
| 36-155, gnl|canFam2|chr2 (24523263-24523145) | |
| 36-155, gnl|danRer3|chr4 (9842049-9842163) | |
| 36-155, gnl|dasNov1|scaffold_56447 (5717-5835) | |
| 36-155, gnl|echTel1|scaffold_107263 (844-726) | |
| 36-155, gnl|fr1|chrUn (221517373-221517260) | |
| 36-155, gnl|galGal2|chrUn (52281137-52281021) | |
| 36-155, gnl|hg17|chr10 (15035901-15036019) | |
| 36-155, gnl|Hg17|chr10 (15036027-15035909) | |
| 36-155, gnl|loxAfr1|scaffold_5226 (34692-34574) | |
| 36-155, gnl|mm7|chr2 (3341606-3341488) | |
| 36-155, gnl|Mm7|chr2 (3341477-3341596) | |
| 36-155, gnl|monDom2|scaffold_30 (14399641-14399759) | |
| 36-155, gnl|oryCun1|scaffold_189060 (59614-59500) | |
| 36-155, gnl|panTro1|chr8 (15563073-15563195) | |
| 36-155, gnl|rheMac2|chr9 (15229495-15229613) | |
| 36-155, gnl|rn3|chr17 (85939340-85939458) | |
| 36-155, gnl|tetNig1|chr19 (1211791-1211906) | |
| 207-370, gnl|bosTau2|chr13 (17334333-17334494) | |
| 207-370, gnl|Hg17|chr10 (15027197-15027040) | |
| 207-370, gnl|Mm7|chr2 (3346537-3346716) | |
| 377-828, gnl|bosTau2|chr13 (17334527-17334972) | |
| 377-828, gnl|Hg17|chr10 (15027012-15025915) |