Non-Coding RNA Search

Ss1.1-Thy1-THY010031E07.5

Sequence:


               
               TAAATAAAATGCAGAAATGGAGTTAGGCTTTTGTGAGGTTCAGTGAAAGGCAGAAGCCTT
AAGGACTGTGGTATAAATTGTACTCCTATTTTTGAATAGTATACATATGACCTGCACCAT
CATCTATGGCAGCCTTGGTTACTGATTTGATTTTTCAAGCCATATAATATCCAGTACGGT
AAAAAGTGAAGAATTTCATTTGTAGAAATTACGCAAGGTAGTGTCACAGCTTTTGTTTCT
CATATTAAGTATTTTGGAGACCAT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------GGGGTGGGGGAAGCCTAAAAAAAGGCAAAAAATACATACATACATACA
TACATAATACCTTCCTCTCCTTTCTCCTTTCTTTTTTTTAGAGGGAGGAAACATAATCTG
TGTTTGCAAGTCTTAGCCAAAAAAAAAAAATAATTCAGGTACAGTAGTGAAGCTAGAATC
AGGTAGACAGGTAAAATTTATAGATGAGGGTGTTGGGATTGGAACCGGAGGGGAGTCAGT
GACAAGCATCCTTGGAGGAGATGTGCAGAGCAGGTGACCGATGGGAGGGGAAGTGCCAAG
TGAGGCGAGAGAGGAGCACATCAGGGGAGGAGAGGAATGGGCTGGCGAGGGTGCAGGAAG
GGCAGAGGGCCTGGTGTCGGCAGCAAATGGGCTCCCAGAGAGGAGGCTGTAAGTCAGAGG
ATCACATCGACAGTGTCACGTGGGACACTTAAACTTCAACGAAGGACCTTAGATATAGGA
TCTTGTTCACTGGAGGAAAGAACAAGCAAGGAAAGAAGACAAGCCAGTGCAATGGGAGCA
GTTTCCCAAATTGGCCCGCACAGCAACAGCCTCCAACCTCTTGGTAAAGCGAGTCGAGGC
TTAGAACATTCACACAGGTTTGAAGAAATTCCAGGATTGGTTTCTGCTTGTAACCTATTT
TTTCCCCTTTGACCCCTGGAGCATCTTTCCAAGGGTGTCGCTTCAGTCATCCATGCCCTT
CTCCCTTGCAGGCGGAAGGTCACAAGCTATACAAGGACCTGAAGAACTTCCTCAGTGCAG
TCAAAGGTGGGTGTCAGAGGGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAATAAAATGCAGAAATGGAGTTAGGCTTTTGTGAGGTTCAGTGAAAGGCAGAAGCCTT
AAGGACTGTGGTATAAATTGTACTCCTATTTTTGAATAGTATACATATGACCTGCACCAT
CATCTATGGCAGCCTTGGTTACTGATTTGATTTTTCAAGCCATATAATATCCAGTACGGT
AAAAAGTGAAGAATTTCATTTGTAGAAATTACGCAAGGTAGTGTCACAGCTTTTGTTTCT
CATATTAAGTATTTTGGAGACCAT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------GGGGTGGGGGAAGCCTAAAAAAAGGCAAAAAATACATACATACATACA
TACATAATACCTTCCTCTCCTTTCTCCTTTCTTTTTTTTAGAGGGAGGAAACATAATCTG
TGTTTGCAAGTCTTAGCCAAAAAAAAAAAATAATTCAGGTACAGTAGTGAAGCTAGAATC
AGGTAGACAGGTAAAATTTATAGATGAGGGTGTTGGGATTGGAACCGGAGGGGAGTCAGT
GACAAGCATCCTTGGAGGAGATGTGCAGAGCAGGTGACCGATGGGAGGGGAAGTGCCAAG
TGAGGCGAGAGAGGAGCACATCAGGGGAGGAGAGGAATGGGCTGGCGAGGGTGCAGGAAG
GGCAGAGGGCCTGGTGTCGGCAGCAAATGGGCTCCCAGAGAGGAGGCTGTAAGTCAGAGG
ATCACATCGACAGTGTCACGTGGGACACTTAAACTTCAACGAAGGACCTTAGATATAGGA
TCTTGTTCACTGGAGGAAAGAACAAGCAAGGAAAGAAGACAAGCCAGTGCAATGGGAGCA
GTTTCCCAAATTGGCCCGCACAGCAACAGCCTCCAACCTCTTGGTAAAGCGAGTCGAGGC
TTAGAACATTCACACAGGTTTGAAGAAATTCCAGGATTGGTTTCTGCTTGTAACCTATTT
TTTCCCCTTTGACCCCTGGAGCATCTTTCCAAGGGTGTCGCTTCAGTCATCCATGCCCTT
CTCCCTTGCAGGCGGAAGGTCACAAGCTATACAAGGACCTGAAGAACTTCCTCAGTGCAG
TCAAAGGTGGGTGTCAGAGGGAGC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               5-263, gnl|bosTau2|chr5 (20868253-20868519)
               

               
               5-263, gnl|Hg17|chr12 (49987981-49987422)
               


               
               574-1053, gnl|bosTau2|chr5 (20870198-20870695)
               

               
               574-1053, gnl|Hg17|chr12 (49983607-49983125)
               

               
               574-1053, gnl|Mm7|chr15 (100642760-100642281)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-263, gnl|bosTau2|chr5 (20868253-20868519)
               

               
               5-263, gnl|Hg17|chr12 (49987981-49987422)
               


               
               574-1053, gnl|bosTau2|chr5 (20870198-20870695)
               

               
               574-1053, gnl|Hg17|chr12 (49983607-49983125)
               

               
               574-1053, gnl|Mm7|chr15 (100642760-100642281)

	5-263, gnl\|bosTau2\|chr5 (20868253-20868519)
	5-263, gnl\|Hg17\|chr12 (49987981-49987422)

	574-1053, gnl\|bosTau2\|chr5 (20870198-20870695)
	574-1053, gnl\|Hg17\|chr12 (49983607-49983125)
	574-1053, gnl\|Mm7\|chr15 (100642760-100642281)