Non-Coding RNA Search

Ss1.1-Thy1-THY010033F06.5

Sequence:


               
               CACACACACACTACGGCTGGGGACTAGCTAGGGTTTCTTCCTCAGTACCTGGGTTACCCC
AACCAGGAGCTGGTGGCAAGACCCCAGCCCCTCATGTCAGAGCCCCCTGTGTACTGCAAT
CTGGTGGACCTCCGCCGCTGCCCCCGCTCTCCGCCCCCAAACCCTGCATGCCCGCCGCTG
CAGAGGCTGGACGCCTGGGAGCAGCACTTGGACCACAGCTCCGGACGCTGCTTCTACATA
AATTCGCTGACTGGCTGCAAATCTTGGAAGCCCCCACGCCACACCCGCACCCGAGAGATG
AACCCTGGCTCCATGGAGAGGACCCAGACCCTGAATAGGGACAATGGTGTCCTGCAGCCT
CAGGCAAAGGGCTCAGAATCTGGCCCAGGGACCCCAGAACTTTTCGACTCCCAGGCTTCA
CCCTGCCTCCGCAGACGCACCTCCCAGCTTGACCCCTCAGACCAGCCTTCAGCTTTGCAG
TTTGCTCGGCCTCTGCCCCAGGTCCTGGATGACCCTCACGAGGTGGAAAAGTCAGGCCTG
CTCAATATGACCAAGATCGCCCAGGGCGGTCGCAAGCTCAGGAAGAACTGGGCCCCATCT
TGGGTAGTATTAGCGGGTAACAGCCTGGTGTTCTACCGAGAGCCACCGCCGACCGCCCCC
TCCACCCTCTGGGGCCCAGCCGGGAGCCGACCAGAAAGCAGCGTGGACCTTCGCGGAGCA
GCCCTGGCCCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCGCACGGTC
CCTGGACACGAGTTCCTGCTGCAGTCAGACCAGGAGACCGAGTTGCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACACACACACTACGGCTGGGGACTAGCTAGGGTTTCTTCCTCAGTACCTGGGTTACCCC
AACCAGGAGCTGGTGGCAAGACCCCAGCCCCTCATGTCAGAGCCCCCTGTGTACTGCAAT
CTGGTGGACCTCCGCCGCTGCCCCCGCTCTCCGCCCCCAAACCCTGCATGCCCGCCGCTG
CAGAGGCTGGACGCCTGGGAGCAGCACTTGGACCACAGCTCCGGACGCTGCTTCTACATA
AATTCGCTGACTGGCTGCAAATCTTGGAAGCCCCCACGCCACACCCGCACCCGAGAGATG
AACCCTGGCTCCATGGAGAGGACCCAGACCCTGAATAGGGACAATGGTGTCCTGCAGCCT
CAGGCAAAGGGCTCAGAATCTGGCCCAGGGACCCCAGAACTTTTCGACTCCCAGGCTTCA
CCCTGCCTCCGCAGACGCACCTCCCAGCTTGACCCCTCAGACCAGCCTTCAGCTTTGCAG
TTTGCTCGGCCTCTGCCCCAGGTCCTGGATGACCCTCACGAGGTGGAAAAGTCAGGCCTG
CTCAATATGACCAAGATCGCCCAGGGCGGTCGCAAGCTCAGGAAGAACTGGGCCCCATCT
TGGGTAGTATTAGCGGGTAACAGCCTGGTGTTCTACCGAGAGCCACCGCCGACCGCCCCC
TCCACCCTCTGGGGCCCAGCCGGGAGCCGACCAGAAAGCAGCGTGGACCTTCGCGGAGCA
GCCCTGGCCCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCGCACGGTC
CCTGGACACGAGTTCCTGCTGCAGTCAGACCAGGAGACCGAGTTGCGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|26348907|dbj|BAC38093.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26348907|dbj|BAC38093.1|

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               75-298, gnl|bosTau2|chr5 (34803889-34804112)
               

               
               75-298, gnl|Hg17|chr12 (56157731-56157511)
               


               
               300-430, gnl|bosTau2|chr5 (34804304-34804435)
               

               
               300-430, gnl|Hg17|chr12 (56157320-56157189)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               75-298, gnl|bosTau2|chr5 (34803889-34804112)
               

               
               75-298, gnl|Hg17|chr12 (56157731-56157511)
               


               
               300-430, gnl|bosTau2|chr5 (34804304-34804435)
               

               
               300-430, gnl|Hg17|chr12 (56157320-56157189)

	75-298, gnl\|bosTau2\|chr5 (34803889-34804112)
	75-298, gnl\|Hg17\|chr12 (56157731-56157511)

	300-430, gnl\|bosTau2\|chr5 (34804304-34804435)
	300-430, gnl\|Hg17\|chr12 (56157320-56157189)