Non-Coding RNA Search

Ss1.1-Thy1-THY010040A03.5

Sequence:


               
               CCTCATGCTGCCCGTGGCTGGACTCCCTGTGTTCCAGGCCATCCTCCCCCACTGGCCCCA
GTCCCCCAGCGTCCGTCTCCAGGTCCTCGGCTGAGGGTATCTGCCGCAGTCGGGGCTTCT
CACTCGGCTTGGCTGGCCTCTTGATCAGCTGGACATGAGGTTTGAGCCGCTCCAGGCGGG
GCTGCAAGGCACCCAGCGGTGCGCTTGGGGGCAGGGGCTCTGAGCGGGTCCGGCTCAGGG
GCCGGTGGAGGCCTGACCCGGAGAGCCGCTCGCTGGTCATTAAGGACTGGGCAAAGTGGA
AGGGCAGGGGCCCAAGCCCGGGCACAGTCAGCAGGGGGGCGTGAGAGACTGAGGGATCCA
GGAGGAGAATGGGCTGCAGGCGGGAGGGCAGGGGGCCCCCGGCCTCGGGCTCCAGGCCGT
GGGGCAGAAAGAGGGGAGCATGGGGGCTCCCCAGGACCGGTCCCCGGGGGCCCAGAGTCG
GATGGGTCCTGCGGTCACCATCAGCCTCGGAGCCCAGGACTGGGTTGGGGCCATGCTCGC
TGTCATTGGGGGAGCTGCACCCTGACGCCGGCGTGCTGCTGCTACTGGGGGAGGAGTCGC
CGAGGGTCTCTGCCGGCCGCCGCCGGAGGCTCGGCGGGGCACTCTCCTTCCGGAGCAGGG
GGTTCTTCCTCCGCTCCAGGGACTTCTTGGGCTTGTAACGCAGCTTCAGGTTGGGCTCAG
AGACTGTCTTACGCAGAGGAAAGTGTTCTGGGGGGTCGCTGGGCCCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCATGCTGCCCGTGGCTGGACTCCCTGTGTTCCAGGCCATCCTCCCCCACTGGCCCCA
GTCCCCCAGCGTCCGTCTCCAGGTCCTCGGCTGAGGGTATCTGCCGCAGTCGGGGCTTCT
CACTCGGCTTGGCTGGCCTCTTGATCAGCTGGACATGAGGTTTGAGCCGCTCCAGGCGGG
GCTGCAAGGCACCCAGCGGTGCGCTTGGGGGCAGGGGCTCTGAGCGGGTCCGGCTCAGGG
GCCGGTGGAGGCCTGACCCGGAGAGCCGCTCGCTGGTCATTAAGGACTGGGCAAAGTGGA
AGGGCAGGGGCCCAAGCCCGGGCACAGTCAGCAGGGGGGCGTGAGAGACTGAGGGATCCA
GGAGGAGAATGGGCTGCAGGCGGGAGGGCAGGGGGCCCCCGGCCTCGGGCTCCAGGCCGT
GGGGCAGAAAGAGGGGAGCATGGGGGCTCCCCAGGACCGGTCCCCGGGGGCCCAGAGTCG
GATGGGTCCTGCGGTCACCATCAGCCTCGGAGCCCAGGACTGGGTTGGGGCCATGCTCGC
TGTCATTGGGGGAGCTGCACCCTGACGCCGGCGTGCTGCTGCTACTGGGGGAGGAGTCGC
CGAGGGTCTCTGCCGGCCGCCGCCGGAGGCTCGGCGGGGCACTCTCCTTCCGGAGCAGGG
GGTTCTTCCTCCGCTCCAGGGACTTCTTGGGCTTGTAACGCAGCTTCAGGTTGGGCTCAG
AGACTGTCTTACGCAGAGGAAAGTGTTCTGGGGGGTCGCTGGGCCCAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               207-326, + strand, RNAz p=0.891064

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               207-326, + strand, RNAz p=0.891064

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               140-443, gnl|bosTau2|chr5 (25322132-25322451)
               

               
               140-443, gnl|Hg17|chr12 (46475234-46475572)
               

               
               140-443, gnl|Mm7|chr15 (97808672-97808994)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-443, gnl|bosTau2|chr5 (25322132-25322451)
               

               
               140-443, gnl|Hg17|chr12 (46475234-46475572)
               

               
               140-443, gnl|Mm7|chr15 (97808672-97808994)

	140-443, gnl\|bosTau2\|chr5 (25322132-25322451)
	140-443, gnl\|Hg17\|chr12 (46475234-46475572)
	140-443, gnl\|Mm7\|chr15 (97808672-97808994)