Ss1.1-Thy1-THY010047C11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCGGCCGCCCGGGCAGGTACCGCGATTTGCATGACCAAATCATCAAGACCATCAAAGG ATTGCCCTGGCAGGGTGAGGACCCCCGTAGGCTTCTCCAGTCCCTCAGTCGGCTCCAGAA ACCCCGCACCTTCATCCTGAAAAGTAAAGGTATCAAACAAAAGCAGATCATTCCAAAGAA CCTGCTGGACTCCAAATCCCTGAAGCTCATCATCAGTATGACCCTGCATGACCGCACCAC CAAGTCCCTGCTGCACCTGCACAAGAAGAAGAAGCCACCCAGCATCAGCGCCCAGTTCCA AACATCCCTTAATAAGCTCCTGGAGGCGCTAGGCAAGGCAGAGCCCTTCTTCATCCGCTG CATCCGCTCCAACGCCGAGAAGAAAGAGCTGTGTTTCGATGATGACCTGGTGCTGCAGCA GCTGCGCTACACGGGCATGCTGGAGACCGTGCGGATCCGGAGGTCGGGCTACAGTGCCAA GTACACGTTCCAGGATTTCACGGAGCAGTTCCAAGTGCTGCTGCCCAAGAATGCCCAGCC CTGCAGGGAGGTCATCTCTGCCCTGCTGGAGAAGCTGGATGGACATAGACAAGAGGAGCT ACCAGATCGGGAAGACCAAGGTTTTCCTAAAGGAGACAGAGAGGCAGGCCCTGCAGGAGA CACTGCACCGGGAGGTCGTGCGGAAGATCCTGTTCCTGCAGAGCTGGTTCCGGATGGTGC TGGAGCGCAGGCACTTCCTGCAGATGAGGCGGGCAGCTGTCACCATCCAGGCCTGCTGGC GGTCCTATTGCGTGAGACGGGCCCTGGAGAGGACGCAGGCGGCAGTGTACCTCCAGGCTG TGTGGAGGGGCTACCGGCAGCGGGCAGCCTACCAGCGCCAGAGACTGAGCATCATCCGCC TGCAGAGCCTCTGCCGGGGGCACCTGCAGCGCAAGAGCTTCAGCCGGATGGTGGCAGAGA AGCAGAAGGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCGGCCGCCCGGGCAGGTACCGCGATTTGCATGACCAAATCATCAAGACCATCAAAGG ATTGCCCTGGCAGGGTGAGGACCCCCGTAGGCTTCTCCAGTCCCTCAGTCGGCTCCAGAA ACCCCGCACCTTCATCCTGAAAAGTAAAGGTATCAAACAAAAGCAGATCATTCCAAAGAA CCTGCTGGACTCCAAATCCCTGAAGCTCATCATCAGTATGACCCTGCATGACCGCACCAC CAAGTCCCTGCTGCACCTGCACAAGAAGAAGAAGCCACCCAGCATCAGCGCCCAGTTCCA AACATCCCTTAATAAGCTCCTGGAGGCGCTAGGCAAGGCAGAGCCCTTCTTCATCCGCTG CATCCGCTCCAACGCCGAGAAGAAAGAGCTGTGTTTCGATGATGACCTGGTGCTGCAGCA GCTGCGCTACACGGGCATGCTGGAGACCGTGCGGATCCGGAGGTCGGGCTACAGTGCCAA GTACACGTTCCAGGATTTCACGGAGCAGTTCCAAGTGCTGCTGCCCAAGAATGCCCAGCC CTGCAGGGAGGTCATCTCTGCCCTGCTGGAGAAGCTGGATGGACATAGACAAGAGGAGCT ACCAGATCGGGAAGACCAAGGTTTTCCTAAAGGAGACAGAGAGGCAGGCCCTGCAGGAGA CACTGCACCGGGAGGTCGTGCGGAAGATCCTGTTCCTGCAGAGCTGGTTCCGGATGGTGC TGGAGCGCAGGCACTTCCTGCAGATGAGGCGGGCAGCTGTCACCATCCAGGCCTGCTGGC GGTCCTATTGCGTGAGACGGGCCCTGGAGAGGACGCAGGCGGCAGTGTACCTCCAGGCTG TGTGGAGGGGCTACCGGCAGCGGGCAGCCTACCAGCGCCAGAGACTGAGCATCATCCGCC TGCAGAGCCTCTGCCGGGGGCACCTGCAGCGCAAGAGCTTCAGCCGGATGGTGGCAGAGA AGCAGAAGGCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
| 24-139, gnl|bosTau2|chr7 (2880680-2880565) | |
| 24-139, gnl|canFam2|chr20 (48538286-48538163) | |
| 24-139, gnl|fr1|chrUn (73935517-73935640) | |
| 24-139, gnl|galGal2|chr28 (3469353-3469232) | |
| 24-139, gnl|hg17|chr19 (17152733-17152857) | |
| 24-139, gnl|Hg17|chr19 (17152735-17152850) | |
| 24-139, gnl|loxAfr1|scaffold_23728 (2892-3016) | |
| 24-139, gnl|mm7|chr8 (69805981-69806105) | |
| 24-139, gnl|Mm7|chr8 (69805983-69806098) | |
| 24-139, gnl|monDom2|scaffold_100 (4104493-4104617) | |
| 24-139, gnl|oryCun1|scaffold_194756 (10827-10951) | |
| 24-139, gnl|panTro1|chr20 (17845328-17845452) | |
| 24-139, gnl|rheMac2|chr19 (16728479-16728603) | |
| 24-139, gnl|rn3|chr16 (18495541-18495665) | |
| 24-139, gnl|tetNig1|chr1 (11470545-11470669) | |
| 24-139, gnl|xenTro1|scaffold_1139 (146861-146761) | |
| 177-300, gnl|bosTau2|chr7 (2878225-2878102) | |
| 177-300, gnl|canFam2|chr20 (48535310-48535193) | |
| 177-300, gnl|danRer3|chr19 (19727171-19727061) | |
| 177-300, gnl|dasNov1|scaffold_44629 (3377-3479) | |
| 177-300, gnl|echTel1|scaffold_233725 (6813-6696) | |
| 177-300, gnl|fr1|chrUn (73936316-73936439) | |
| 177-300, gnl|galGal2|chr28 (3467691-3467581) | |
| 177-300, gnl|hg17|chr19 (17156658-17156775) | |
| 177-300, gnl|Hg17|chr19 (17156672-17156795) | |
| 177-300, gnl|loxAfr1|scaffold_23728 (7664-7781) | |
| 177-300, gnl|mm7|chr8 (69809823-69809940) | |
| 177-300, gnl|Mm7|chr8 (69809837-69809960) | |
| 177-300, gnl|monDom2|scaffold_100 (4110332-4110449) | |
| 177-300, gnl|oryCun1|scaffold_194756 (13640-13756) | |
| 177-300, gnl|panTro1|chr20 (17849263-17849380) | |
| 177-300, gnl|rheMac2|chr19 (16732405-16732522) | |
| 177-300, gnl|rn3|chr16 (18499116-18499233) | |
| 177-300, gnl|tetNig1|chr1 (11471360-11471463) | |
| 490-622, gnl|bosTau2|chr7 (2872506-2872378) | |
| 490-622, gnl|canFam2|chr20 (48531623-48531446) | |
| 490-622, gnl|danRer3|chr19 (19726283-19726135) | |
| 490-622, gnl|dasNov1|scaffold_303868 (341-502) | |
| 490-622, gnl|echTel1|scaffold_233725 (2488-2324) | |
| 490-622, gnl|fr1|chrUn (5068901-5069061) | |
| 490-622, gnl|galGal2|chr28 (3466198-3466023) | |
| 490-622, gnl|hg17|chr19 (17162869-17163046) | |
| 490-622, gnl|Hg17|chr19 (17162902-17163030) | |
| 490-622, gnl|loxAfr1|scaffold_23728 (12445-12611) | |
| 490-622, gnl|mm7|chr8 (69813078-69813247) | |
| 490-622, gnl|Mm7|chr8 (69813103-69813231) | |
| 490-622, gnl|monDom2|scaffold_100 (4118961-4119127) | |
| 490-622, gnl|oryCun1|scaffold_194756 (16389-16576) | |
| 490-622, gnl|panTro1|chr20 (17855648-17855825) | |
| 490-622, gnl|rheMac2|chr19 (16738360-16738537) | |
| 490-622, gnl|rn3|chr16 (18501680-18501823) | |
| 490-622, gnl|tetNig1|chr5 (10938827-10938683) | |
| 761-951, gnl|bosTau2|chr7 (2871043-2870855) | |
| 761-951, gnl|Hg17|chr19 (17164706-17164884) | |
| 761-951, gnl|Mm7|chr8 (69814842-69815014) |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 24-139, gnl|bosTau2|chr7 (2880680-2880565) | |
| 24-139, gnl|canFam2|chr20 (48538286-48538163) | |
| 24-139, gnl|fr1|chrUn (73935517-73935640) | |
| 24-139, gnl|galGal2|chr28 (3469353-3469232) | |
| 24-139, gnl|hg17|chr19 (17152733-17152857) | |
| 24-139, gnl|Hg17|chr19 (17152735-17152850) | |
| 24-139, gnl|loxAfr1|scaffold_23728 (2892-3016) | |
| 24-139, gnl|mm7|chr8 (69805981-69806105) | |
| 24-139, gnl|Mm7|chr8 (69805983-69806098) | |
| 24-139, gnl|monDom2|scaffold_100 (4104493-4104617) | |
| 24-139, gnl|oryCun1|scaffold_194756 (10827-10951) | |
| 24-139, gnl|panTro1|chr20 (17845328-17845452) | |
| 24-139, gnl|rheMac2|chr19 (16728479-16728603) | |
| 24-139, gnl|rn3|chr16 (18495541-18495665) | |
| 24-139, gnl|tetNig1|chr1 (11470545-11470669) | |
| 24-139, gnl|xenTro1|scaffold_1139 (146861-146761) | |
| 177-300, gnl|bosTau2|chr7 (2878225-2878102) | |
| 177-300, gnl|canFam2|chr20 (48535310-48535193) | |
| 177-300, gnl|danRer3|chr19 (19727171-19727061) | |
| 177-300, gnl|dasNov1|scaffold_44629 (3377-3479) | |
| 177-300, gnl|echTel1|scaffold_233725 (6813-6696) | |
| 177-300, gnl|fr1|chrUn (73936316-73936439) | |
| 177-300, gnl|galGal2|chr28 (3467691-3467581) | |
| 177-300, gnl|hg17|chr19 (17156658-17156775) | |
| 177-300, gnl|Hg17|chr19 (17156672-17156795) | |
| 177-300, gnl|loxAfr1|scaffold_23728 (7664-7781) | |
| 177-300, gnl|mm7|chr8 (69809823-69809940) | |
| 177-300, gnl|Mm7|chr8 (69809837-69809960) | |
| 177-300, gnl|monDom2|scaffold_100 (4110332-4110449) | |
| 177-300, gnl|oryCun1|scaffold_194756 (13640-13756) | |
| 177-300, gnl|panTro1|chr20 (17849263-17849380) | |
| 177-300, gnl|rheMac2|chr19 (16732405-16732522) | |
| 177-300, gnl|rn3|chr16 (18499116-18499233) | |
| 177-300, gnl|tetNig1|chr1 (11471360-11471463) | |
| 490-622, gnl|bosTau2|chr7 (2872506-2872378) | |
| 490-622, gnl|canFam2|chr20 (48531623-48531446) | |
| 490-622, gnl|danRer3|chr19 (19726283-19726135) | |
| 490-622, gnl|dasNov1|scaffold_303868 (341-502) | |
| 490-622, gnl|echTel1|scaffold_233725 (2488-2324) | |
| 490-622, gnl|fr1|chrUn (5068901-5069061) | |
| 490-622, gnl|galGal2|chr28 (3466198-3466023) | |
| 490-622, gnl|hg17|chr19 (17162869-17163046) | |
| 490-622, gnl|Hg17|chr19 (17162902-17163030) | |
| 490-622, gnl|loxAfr1|scaffold_23728 (12445-12611) | |
| 490-622, gnl|mm7|chr8 (69813078-69813247) | |
| 490-622, gnl|Mm7|chr8 (69813103-69813231) | |
| 490-622, gnl|monDom2|scaffold_100 (4118961-4119127) | |
| 490-622, gnl|oryCun1|scaffold_194756 (16389-16576) | |
| 490-622, gnl|panTro1|chr20 (17855648-17855825) | |
| 490-622, gnl|rheMac2|chr19 (16738360-16738537) | |
| 490-622, gnl|rn3|chr16 (18501680-18501823) | |
| 490-622, gnl|tetNig1|chr5 (10938827-10938683) | |
| 761-951, gnl|bosTau2|chr7 (2871043-2870855) | |
| 761-951, gnl|Hg17|chr19 (17164706-17164884) | |
| 761-951, gnl|Mm7|chr8 (69814842-69815014) |