Non-Coding RNA Search

Ss1.1-Thy1-THY010053D04.5

Sequence:


               
               CTCAGCTGTCATCACAGACATAGCTTTGGCACCGTTATTAACTTAATTCTCAATTCTGTT
TCTGCTTCTACATTTTCATTTTCAGCTATTTCCTACTCCTCATTGCCAAAGAATATTTTG
CGAAGCTTCCTCTTTCGGGTGCTTTTGTATAGCTGATGCCACTCTGGTACAAATGCTTTG
AAAATGGATGCTGAATTCCATTCCTGGGGCCTTTAGGGAAACTCTTAAGAGAATCAGATT
AAGAAAGTTACTGTATTTCATCCGATCTTACCCTTTGTCTGTGTGTAATTTATGGTCATC
TCATTTGGGGGCACCCCTCACTGCTTTAAAAGTCCTCATTGCGGGAGGATTGGGTATCAC
CGAAGGCAGGCCTGGTCGTATAGGAGGATGGGGTGCAAAGTGATGAAATGTTGCACGTCA
GGTGGATGCTTGGGTGGGCCAGGTCAGCTCCCCAGGGGAGGGGGACCCTGGACTGGGAAC
TGAAAGACCAGGTTCTAGACCTAAAGGACCTCGTCTGAGCCTCTCTTTACTTTTCACGTG
GGGGTTTTGGAATTAGGGCATATCAAAGGTCCTTTTGTGGCCTTAGTATTTTGTAATTTT
TGCAGCTGTCTCATCTATACTGGTGTCCACTTTATCAAGTTGTAGAAGTCGAAAAAGTAA
CCAGGTCAGATGCCAAAATAAATCTCGTCAGGGTCATTGAGACACTAAGAATCTCTACGT
CTCAGAAAAAGAGTGTTGTTTTTCCCTCCTTCTCTGTGACCATGCTCTCTAGAAGTGAAA
AGTAAAGATGTGAAGTCCATCTTCTGTGCTTTGTTAAAGTAAAAAGAAGTTTTACTTCTA
TTTTAATAATAGAATTTTTGCGTCTTTAATAAAGGCAGTGATTTGGCCTCCAGCTGAGTT
TAGATTTGAAAAGATGAGAATATTAAAGCTTGTCAGCCAGCCCACAAACCAATTAAGTAT
TTATAAGCTGGCAGAAGGTAGGGTAGAGTTGTTTTTATTTTCTCCACAAGTACCCATCAC
AATTTTTTAAAATTGTGTAAAATAGAAACTCTGTTTGAAAATATGGTAGTGAAAGTGGGT
AACAACAAAGATGGCTCCACAACGAGATAAGTAAGTAGGCTAGAAATTCAGCCAAAAGCA
GTTCAAAGGTGTTAGTGCTGGTCAGGACTCTGTGCCATGATAGAAAGATGATGCCTTGAA
CACCCTTTGATGTACATCACAGCAGTGTTTTTTTTGACCCTCCATGGTAGAGTTAATGTA
AAATAAAAACAAAAACAAATAAAT------------------------------------
------------------------------------------------------------
------------GGATTTAATCTTCAGAACATACAAATATCTCATACAGCTTTATACCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAGCTGTCATCACAGACATAGCTTTGGCACCGTTATTAACTTAATTCTCAATTCTGTT
TCTGCTTCTACATTTTCATTTTCAGCTATTTCCTACTCCTCATTGCCAAAGAATATTTTG
CGAAGCTTCCTCTTTCGGGTGCTTTTGTATAGCTGATGCCACTCTGGTACAAATGCTTTG
AAAATGGATGCTGAATTCCATTCCTGGGGCCTTTAGGGAAACTCTTAAGAGAATCAGATT
AAGAAAGTTACTGTATTTCATCCGATCTTACCCTTTGTCTGTGTGTAATTTATGGTCATC
TCATTTGGGGGCACCCCTCACTGCTTTAAAAGTCCTCATTGCGGGAGGATTGGGTATCAC
CGAAGGCAGGCCTGGTCGTATAGGAGGATGGGGTGCAAAGTGATGAAATGTTGCACGTCA
GGTGGATGCTTGGGTGGGCCAGGTCAGCTCCCCAGGGGAGGGGGACCCTGGACTGGGAAC
TGAAAGACCAGGTTCTAGACCTAAAGGACCTCGTCTGAGCCTCTCTTTACTTTTCACGTG
GGGGTTTTGGAATTAGGGCATATCAAAGGTCCTTTTGTGGCCTTAGTATTTTGTAATTTT
TGCAGCTGTCTCATCTATACTGGTGTCCACTTTATCAAGTTGTAGAAGTCGAAAAAGTAA
CCAGGTCAGATGCCAAAATAAATCTCGTCAGGGTCATTGAGACACTAAGAATCTCTACGT
CTCAGAAAAAGAGTGTTGTTTTTCCCTCCTTCTCTGTGACCATGCTCTCTAGAAGTGAAA
AGTAAAGATGTGAAGTCCATCTTCTGTGCTTTGTTAAAGTAAAAAGAAGTTTTACTTCTA
TTTTAATAATAGAATTTTTGCGTCTTTAATAAAGGCAGTGATTTGGCCTCCAGCTGAGTT
TAGATTTGAAAAGATGAGAATATTAAAGCTTGTCAGCCAGCCCACAAACCAATTAAGTAT
TTATAAGCTGGCAGAAGGTAGGGTAGAGTTGTTTTTATTTTCTCCACAAGTACCCATCAC
AATTTTTTAAAATTGTGTAAAATAGAAACTCTGTTTGAAAATATGGTAGTGAAAGTGGGT
AACAACAAAGATGGCTCCACAACGAGATAAGTAAGTAGGCTAGAAATTCAGCCAAAAGCA
GTTCAAAGGTGTTAGTGCTGGTCAGGACTCTGTGCCATGATAGAAAGATGATGCCTTGAA
CACCCTTTGATGTACATCACAGCAGTGTTTTTTTTGACCCTCCATGGTAGAGTTAATGTA
AAATAAAAACAAAAACAAATAAAT------------------------------------
------------------------------------------------------------
------------GGATTTAATCTTCAGAACATACAAATATCTCATACAGCTTTATACCAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               204-1155, gnl|bosTau2|chr25 (26556513-26555559)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               204-1155, gnl|bosTau2|chr25 (26556513-26555559)