Ss1.1-Thy1-THY010053G02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAACTCCGGGGAAACAGCACCCGGCCGGCCGGAGCCACCGGACAGAGCTGGGCCGGCCT AGCCCAGAGACATGGACAGTTGCTACGACCCAAGTCTGCCCGGCATCATCGAATATGATG ATTTCAAATTCAACCCGTCCATTGTGGAGCCCAAGGAGCCGGCCCCAGAGACAGCTGATG GCCCCTACCTGGTGATCGTGGAACAGCCTAAGCAGCGAGGCTTCCGATTTCGATATGGCT GCGAAGGCCCTTCCCATGGAGGACTGCCAGGTGCCTCTAGTGAGAAGGGCCGGAAGACTT ATCCCACTGTCAAGATCTGTAACTATGAGGGACCAGCGAAGATCGAGGTGGACCTGGTAA CACACAGTGACCCGCCTCGTGCTCATGCCCACAGCCTGGTGGGCAAGCAGTGCTCGGAGC TGGGGGTCTGCGCAGTGTCTGTGGGGCCCAAGGACATGACTGCCCAATTTAATAACTTGG GTGTCCTGCATGTCACCAACCACCTGCACCAGACGCCCCTGCACTTGGCAGTCATCACGG GGCAGACGAGCGTGGTGAGCTTCCTGCTGCAGGTGGGTGCAGACCCAGCACTGCTGGATA GGCATGGAGATTCAGCAGTGCACCTGGCACTTCGAGCAGGTGCCAGCGCCCCAGACCTGC TGCGCGCCCTGCTGCGGAGTGGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAACTCCGGGGAAACAGCACCCGGCCGGCCGGAGCCACCGGACAGAGCTGGGCCGGCCT AGCCCAGAGACATGGACAGTTGCTACGACCCAAGTCTGCCCGGCATCATCGAATATGATG ATTTCAAATTCAACCCGTCCATTGTGGAGCCCAAGGAGCCGGCCCCAGAGACAGCTGATG GCCCCTACCTGGTGATCGTGGAACAGCCTAAGCAGCGAGGCTTCCGATTTCGATATGGCT GCGAAGGCCCTTCCCATGGAGGACTGCCAGGTGCCTCTAGTGAGAAGGGCCGGAAGACTT ATCCCACTGTCAAGATCTGTAACTATGAGGGACCAGCGAAGATCGAGGTGGACCTGGTAA CACACAGTGACCCGCCTCGTGCTCATGCCCACAGCCTGGTGGGCAAGCAGTGCTCGGAGC TGGGGGTCTGCGCAGTGTCTGTGGGGCCCAAGGACATGACTGCCCAATTTAATAACTTGG GTGTCCTGCATGTCACCAACCACCTGCACCAGACGCCCCTGCACTTGGCAGTCATCACGG GGCAGACGAGCGTGGTGAGCTTCCTGCTGCAGGTGGGTGCAGACCCAGCACTGCTGGATA GGCATGGAGATTCAGCAGTGCACCTGGCACTTCGAGCAGGTGCCAGCGCCCCAGACCTGC TGCGCGCCCTGCTGCGGAGTGGGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 313-466, + strand, RNAz p=0.616708 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 313-466, + strand, RNAz p=0.616708 |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 313-466, gnl|bosTau2|chr26 (14128753-14128600) | |
| 313-466, gnl|canFam2|chr28 (17905566-17905729) | |
| 313-466, gnl|danRer3|chrUn (155180869-155180710) | |
| 313-466, gnl|dasNov1|scaffold_180459 (1284-1119) | |
| 313-466, gnl|echTel1|scaffold_316526 (144464-144629) | |
| 313-466, gnl|fr1|chrUn (139258639-139258809) | |
| 313-466, gnl|hg17|chr10 (104146644-104146809) | |
| 313-466, gnl|Hg17|chr10 (104146649-104146802) | |
| 313-466, gnl|loxAfr1|scaffold_13013 (48057-48222) | |
| 313-466, gnl|mm7|chr19 (46203569-46203734) | |
| 313-466, gnl|Mm7|chr19 (46203574-46203727) | |
| 313-466, gnl|monDom2|scaffold_14 (60951312-60951147) | |
| 313-466, gnl|oryCun1|scaffold_173060 (54687-54852) | |
| 313-466, gnl|panTro1|chr8 (105905723-105905888) | |
| 313-466, gnl|rheMac2|chr9 (102054237-102054402) | |
| 313-466, gnl|rn3|chr1 (251785794-251785959) | |
| 313-466, gnl|tetNig1|chr17 (7690869-7691039) | |
| 313-466, gnl|xenTro1|scaffold_1235 (54655-54820) | |
| 503-684, gnl|bosTau2|chr26 (14125743-14125562) | |
| 503-684, gnl|canFam2|chr28 (17908927-17908726) | |
| 503-684, gnl|canFam2|chr28 (17908696-17908935) | |
| 503-684, gnl|danRer3|chrUn (155175735-155175552) | |
| 503-684, gnl|echTel1|scaffold_316526 (148002-147807) | |
| 503-684, gnl|echTel1|scaffold_316526 (147776-148010) | |
| 503-684, gnl|fr1|chrUn (139261500-139261274) | |
| 503-684, gnl|fr1|chrUn (139261238-139261435) | |
| 503-684, gnl|hg17|chr10 (104150005-104150244) | |
| 503-684, gnl|Hg17|chr10 (104150016-104150196) | |
| 503-684, gnl|hg17|chr18 (12082560-12082760) | |
| 503-684, gnl|loxAfr1|scaffold_13013 (51440-51245) | |
| 503-684, gnl|loxAfr1|scaffold_13013 (51214-51448) | |
| 503-684, gnl|mm7|chr19 (46206688-46206487) | |
| 503-684, gnl|mm7|chr19 (46206457-46206696) | |
| 503-684, gnl|Mm7|chr19 (46206468-46206648) | |
| 503-684, gnl|oryCun1|scaffold_210750 (1980-1779) | |
| 503-684, gnl|oryCun1|scaffold_210750 (1749-1988) | |
| 503-684, gnl|panTro1|chr17 (1909273-1909473) | |
| 503-684, gnl|panTro1|chr8 (105909080-105909319) | |
| 503-684, gnl|rheMac2|chr9 (102057808-102057607) | |
| 503-684, gnl|rheMac2|chr9 (102057577-102057816) | |
| 503-684, gnl|rn3|chr1 (251788925-251788724) | |
| 503-684, gnl|rn3|chr1 (251788694-251788933) | |
| 503-684, gnl|tetNig1|chr17 (7693409-7693163) | |
| 503-684, gnl|tetNig1|chr17 (7693126-7693324) | |
| 503-684, gnl|xenTro1|scaffold_1235 (68704-68934) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 313-466, gnl|bosTau2|chr26 (14128753-14128600) | |
| 313-466, gnl|canFam2|chr28 (17905566-17905729) | |
| 313-466, gnl|danRer3|chrUn (155180869-155180710) | |
| 313-466, gnl|dasNov1|scaffold_180459 (1284-1119) | |
| 313-466, gnl|echTel1|scaffold_316526 (144464-144629) | |
| 313-466, gnl|fr1|chrUn (139258639-139258809) | |
| 313-466, gnl|hg17|chr10 (104146644-104146809) | |
| 313-466, gnl|Hg17|chr10 (104146649-104146802) | |
| 313-466, gnl|loxAfr1|scaffold_13013 (48057-48222) | |
| 313-466, gnl|mm7|chr19 (46203569-46203734) | |
| 313-466, gnl|Mm7|chr19 (46203574-46203727) | |
| 313-466, gnl|monDom2|scaffold_14 (60951312-60951147) | |
| 313-466, gnl|oryCun1|scaffold_173060 (54687-54852) | |
| 313-466, gnl|panTro1|chr8 (105905723-105905888) | |
| 313-466, gnl|rheMac2|chr9 (102054237-102054402) | |
| 313-466, gnl|rn3|chr1 (251785794-251785959) | |
| 313-466, gnl|tetNig1|chr17 (7690869-7691039) | |
| 313-466, gnl|xenTro1|scaffold_1235 (54655-54820) | |
| 503-684, gnl|bosTau2|chr26 (14125743-14125562) | |
| 503-684, gnl|canFam2|chr28 (17908927-17908726) | |
| 503-684, gnl|canFam2|chr28 (17908696-17908935) | |
| 503-684, gnl|danRer3|chrUn (155175735-155175552) | |
| 503-684, gnl|echTel1|scaffold_316526 (148002-147807) | |
| 503-684, gnl|echTel1|scaffold_316526 (147776-148010) | |
| 503-684, gnl|fr1|chrUn (139261500-139261274) | |
| 503-684, gnl|fr1|chrUn (139261238-139261435) | |
| 503-684, gnl|hg17|chr10 (104150005-104150244) | |
| 503-684, gnl|Hg17|chr10 (104150016-104150196) | |
| 503-684, gnl|hg17|chr18 (12082560-12082760) | |
| 503-684, gnl|loxAfr1|scaffold_13013 (51440-51245) | |
| 503-684, gnl|loxAfr1|scaffold_13013 (51214-51448) | |
| 503-684, gnl|mm7|chr19 (46206688-46206487) | |
| 503-684, gnl|mm7|chr19 (46206457-46206696) | |
| 503-684, gnl|Mm7|chr19 (46206468-46206648) | |
| 503-684, gnl|oryCun1|scaffold_210750 (1980-1779) | |
| 503-684, gnl|oryCun1|scaffold_210750 (1749-1988) | |
| 503-684, gnl|panTro1|chr17 (1909273-1909473) | |
| 503-684, gnl|panTro1|chr8 (105909080-105909319) | |
| 503-684, gnl|rheMac2|chr9 (102057808-102057607) | |
| 503-684, gnl|rheMac2|chr9 (102057577-102057816) | |
| 503-684, gnl|rn3|chr1 (251788925-251788724) | |
| 503-684, gnl|rn3|chr1 (251788694-251788933) | |
| 503-684, gnl|tetNig1|chr17 (7693409-7693163) | |
| 503-684, gnl|tetNig1|chr17 (7693126-7693324) | |
| 503-684, gnl|xenTro1|scaffold_1235 (68704-68934) |