Ss1.1-Thy1-THY010066H11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAATGGTTATTCCAGCACTTATTCAGTCGGACAGAGGTGACTCTGTAGAAGTCACGAGAA ACGTGGAGGACGTCGTGGTCAAAATCATTCACGTGTTTGTGGATGCGCTGCCGCATGTTC CCGAGCACAGGCGCCTGCCCATCCTTGCTCAGCTCGTGGATACACTGGGTGCAGAACGCT TCCTCTGGGTTCTCCTCGTCCTGCTCTTTGAACAGTACGTCACTAAGACAGTGCTGGCGG CTGCCTACGGAGAAAAGGATGCCATTTTAGAGGCAGACACTGAATTTTGGATTTCAGTCT GTTGTGAATTCAGTGTCCAGCATCAGATACAAAGCTTGATGAATATCCTCGAGTACTTAC TAAAGCTGCCGGAGGAGAAAGAAGAAACCACTGCCAAAACAGTATCTAATAAGAGTGAAT CACAAGAAGAAGTGCTTCAGGTCTTTAACATAGAGGCTCACACTAGCAAGCAGCTGCGGC ATTTTAAATATTTGTCAGTGTCCTTCATGTCTCAGCTCCTGGCTTCCAATAATTTTATCA GAAAGGTTGTTGAAAGTGGCGGTCCTCAGGTTTTGACAGGCCTTGAACAGAGGTTGCTGG AAACAGTTCTTGGCTACATCCATGCCGTAGCCCGGTCCATGGAGAAAAATGCTGACAAGC TAACTGGGAAGTTCTGGCGTGCGCTCCTCAGTAAAGCTTATGACTTGCTGGATAAGGTCA ATGCCCTGCTGCCCACAGAAACATTCATCCCCGTGATTAGAGGGCTGCTGGAGAACCCAC TGCCATCCGTGCGCCGCAAAGCTTTAGATCTTTTGAACAACAAGTTGCAGCAGAAAACTT CCTGGAAGAAGAAAATCGTTTACCACTTCCTCGAACTGGTCCCAGTCCTTGTGGCCATGG TGAAGCATAAAAGAAAGACGTTAGAAGAGCACGCCATAAATAGACAGACAGCTTTGTACA CCTTAAAACTGCTATGCAAGAATTTTGGTGCAGAAAATCCAGAGCCTTTTATCCCGGTGC TGACCACCGCAGTGAGGTTGATTGTTGCAGGAACAAAGGAGGAGAAGAATGTCTTGGGAA GCGCCCTACTGTGCGTGGCTGAGGTGGTCTCCACCCTGCAAGCACTGGCCATCCCCCAGC TGCCCAGCCTGATGCCATCATTGCTGACGACCATGAAAAGCACCCGCGAGCTGGTCTCTG GTGAGGTCTACCTGCTCAGTGCCCTGGCGGCCCTGCAGAAGGTTGTTGAGACCCTGCCGC ACTTCATCAGCCCCTACCTGGAAGGAGTCCTGTCACAGGTGATTCAGCTGGAGAAAATCA CTAGTGAGATGGGTCCTGCCTCCCAGGCTAATGTTCGTCTCACATCTCTTAAAAAGACGC TGGCAACCACCCTCTCACCCCGAGTCTTACTGCCAGCCATCACCAAGACGTATAAGCAGA TTGAGAAAAACTGGAAGAATCACATGGGCCCGTTTATGAGCGTCCTTCGAGAGCACGTTG GGGTGATGAAGAAGGAGGAGCTCGCCTCCCACCAGCCCCAGCTCACCGCCTTCTTCCTGG AGGCCCTGGACTTCCGTGTCCAGCACGCGGAGAGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAATGGTTATTCCAGCACTTATTCAGTCGGACAGAGGTGACTCTGTAGAAGTCACGAGAA ACGTGGAGGACGTCGTGGTCAAAATCATTCACGTGTTTGTGGATGCGCTGCCGCATGTTC CCGAGCACAGGCGCCTGCCCATCCTTGCTCAGCTCGTGGATACACTGGGTGCAGAACGCT TCCTCTGGGTTCTCCTCGTCCTGCTCTTTGAACAGTACGTCACTAAGACAGTGCTGGCGG CTGCCTACGGAGAAAAGGATGCCATTTTAGAGGCAGACACTGAATTTTGGATTTCAGTCT GTTGTGAATTCAGTGTCCAGCATCAGATACAAAGCTTGATGAATATCCTCGAGTACTTAC TAAAGCTGCCGGAGGAGAAAGAAGAAACCACTGCCAAAACAGTATCTAATAAGAGTGAAT CACAAGAAGAAGTGCTTCAGGTCTTTAACATAGAGGCTCACACTAGCAAGCAGCTGCGGC ATTTTAAATATTTGTCAGTGTCCTTCATGTCTCAGCTCCTGGCTTCCAATAATTTTATCA GAAAGGTTGTTGAAAGTGGCGGTCCTCAGGTTTTGACAGGCCTTGAACAGAGGTTGCTGG AAACAGTTCTTGGCTACATCCATGCCGTAGCCCGGTCCATGGAGAAAAATGCTGACAAGC TAACTGGGAAGTTCTGGCGTGCGCTCCTCAGTAAAGCTTATGACTTGCTGGATAAGGTCA ATGCCCTGCTGCCCACAGAAACATTCATCCCCGTGATTAGAGGGCTGCTGGAGAACCCAC TGCCATCCGTGCGCCGCAAAGCTTTAGATCTTTTGAACAACAAGTTGCAGCAGAAAACTT CCTGGAAGAAGAAAATCGTTTACCACTTCCTCGAACTGGTCCCAGTCCTTGTGGCCATGG TGAAGCATAAAAGAAAGACGTTAGAAGAGCACGCCATAAATAGACAGACAGCTTTGTACA CCTTAAAACTGCTATGCAAGAATTTTGGTGCAGAAAATCCAGAGCCTTTTATCCCGGTGC TGACCACCGCAGTGAGGTTGATTGTTGCAGGAACAAAGGAGGAGAAGAATGTCTTGGGAA GCGCCCTACTGTGCGTGGCTGAGGTGGTCTCCACCCTGCAAGCACTGGCCATCCCCCAGC TGCCCAGCCTGATGCCATCATTGCTGACGACCATGAAAAGCACCCGCGAGCTGGTCTCTG GTGAGGTCTACCTGCTCAGTGCCCTGGCGGCCCTGCAGAAGGTTGTTGAGACCCTGCCGC ACTTCATCAGCCCCTACCTGGAAGGAGTCCTGTCACAGGTGATTCAGCTGGAGAAAATCA CTAGTGAGATGGGTCCTGCCTCCCAGGCTAATGTTCGTCTCACATCTCTTAAAAAGACGC TGGCAACCACCCTCTCACCCCGAGTCTTACTGCCAGCCATCACCAAGACGTATAAGCAGA TTGAGAAAAACTGGAAGAATCACATGGGCCCGTTTATGAGCGTCCTTCGAGAGCACGTTG GGGTGATGAAGAAGGAGGAGCTCGCCTCCCACCAGCCCCAGCTCACCGCCTTCTTCCTGG AGGCCCTGGACTTCCGTGTCCAGCACGCGGAGAGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
| 24-258, gnl|bosTau2|chr28 (4497732-4497498) | |
| 24-258, gnl|canFam2|chr4 (6531003-6530799) | |
| 24-258, gnl|danRer3|chr12 (8489927-8489729) | |
| 24-258, gnl|dasNov1|scaffold_48068 (3603-3807) | |
| 24-258, gnl|echTel1|scaffold_317444 (33430-33226) | |
| 24-258, gnl|fr1|chrUn (104155007-104154813) | |
| 24-258, gnl|galGal2|chrUn (20216511-20216714) | |
| 24-258, gnl|hg17|chr1 (233055980-233056184) | |
| 24-258, gnl|Hg17|chr1 (233056220-233055986) | |
| 24-258, gnl|loxAfr1|scaffold_1255 (91252-91456) | |
| 24-258, gnl|mm7|chr13 (12385789-12385585) | |
| 24-258, gnl|Mm7|chr13 (12385547-12385781) | |
| 24-258, gnl|monDom2|scaffold_13 (48889652-48889448) | |
| 24-258, gnl|oryCun1|scaffold_108309 (860-1064) | |
| 24-258, gnl|panTro1|chr1_random (51348514-51348310) | |
| 24-258, gnl|rheMac2|chr1 (220469976-220469772) | |
| 24-258, gnl|rn3|chr17 (68638751-68638955) | |
| 24-258, gnl|tetNig1|chr2 (2322766-2322574) | |
| 24-258, gnl|xenTro1|scaffold_41 (324100-324304) | |
| 383-547, gnl|bosTau2|chr28 (4495492-4495328) | |
| 383-547, gnl|canFam2|chr4 (6533227-6533086) | |
| 383-547, gnl|danRer3|chr12 (8494344-8494236) | |
| 383-547, gnl|dasNov1|scaffold_48068 (1260-1401) | |
| 383-547, gnl|echTel1|scaffold_317444 (36479-36338) | |
| 383-547, gnl|fr1|chrUn (104155456-104155325) | |
| 383-547, gnl|galGal2|chrUn (20214808-20214949) | |
| 383-547, gnl|hg17|chr1 (233053836-233053977) | |
| 383-547, gnl|Hg17|chr1 (233054004-233053837) | |
| 383-547, gnl|loxAfr1|scaffold_1255 (88918-89059) | |
| 383-547, gnl|mm7|chr13 (12387857-12387716) | |
| 383-547, gnl|Mm7|chr13 (12387690-12387854) | |
| 383-547, gnl|monDom2|scaffold_13 (48891393-48891252) | |
| 383-547, gnl|oryCun1|scaffold_207033 (134999-135140) | |
| 383-547, gnl|panTro1|chr1_random (51350661-51350521) | |
| 383-547, gnl|rheMac2|chr1 (220472079-220471938) | |
| 383-547, gnl|rn3|chr17 (68637223-68637364) | |
| 383-547, gnl|tetNig1|chr2 (2323208-2323090) | |
| 383-547, gnl|xenTro1|scaffold_41 (323379-323517) | |
| 591-718, gnl|bosTau2|chr11 (62917453-62917326) | |
| 591-718, gnl|canFam2|chr4 (6536430-6536298) | |
| 591-718, gnl|danRer3|chr12 (8494712-8494581) | |
| 591-718, gnl|echTel1|scaffold_317444 (43193-43061) | |
| 591-718, gnl|fr1|chrUn (104155982-104155850) | |
| 591-718, gnl|galGal2|chrUn (20213300-20213432) | |
| 591-718, gnl|hg17|chr1 (233049050-233049182) | |
| 591-718, gnl|Hg17|chr1 (233049180-233049053) | |
| 591-718, gnl|loxAfr1|scaffold_18665 (23708-23840) | |
| 591-718, gnl|mm7|chr13 (12391210-12391069) | |
| 591-718, gnl|Mm7|chr13 (12391069-12391205) | |
| 591-718, gnl|monDom2|scaffold_13 (48892161-48892029) | |
| 591-718, gnl|oryCun1|scaffold_207033 (130482-130614) | |
| 591-718, gnl|panTro1|chr1_random (51355444-51355312) | |
| 591-718, gnl|rn3|chr17 (68634382-68634514) | |
| 591-718, gnl|tetNig1|chr2 (2323630-2323502) | |
| 591-718, gnl|xenTro1|scaffold_41 (321541-321678) | |
| 859-1147, gnl|bosTau2|chr11 (62916205-62915917) | |
| 859-1147, gnl|Hg17|chr1 (233047869-233047578) | |
| 859-1147, gnl|Mm7|chr13 (12392611-12392902) | |
| 1295-1457, gnl|bosTau2|chr11 (62913869-62913707) | |
| 1295-1457, gnl|Hg17|chr1 (233045603-233045441) | |
| 1295-1457, gnl|Mm7|chr13 (12394538-12394700) |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 24-258, gnl|bosTau2|chr28 (4497732-4497498) | |
| 24-258, gnl|canFam2|chr4 (6531003-6530799) | |
| 24-258, gnl|danRer3|chr12 (8489927-8489729) | |
| 24-258, gnl|dasNov1|scaffold_48068 (3603-3807) | |
| 24-258, gnl|echTel1|scaffold_317444 (33430-33226) | |
| 24-258, gnl|fr1|chrUn (104155007-104154813) | |
| 24-258, gnl|galGal2|chrUn (20216511-20216714) | |
| 24-258, gnl|hg17|chr1 (233055980-233056184) | |
| 24-258, gnl|Hg17|chr1 (233056220-233055986) | |
| 24-258, gnl|loxAfr1|scaffold_1255 (91252-91456) | |
| 24-258, gnl|mm7|chr13 (12385789-12385585) | |
| 24-258, gnl|Mm7|chr13 (12385547-12385781) | |
| 24-258, gnl|monDom2|scaffold_13 (48889652-48889448) | |
| 24-258, gnl|oryCun1|scaffold_108309 (860-1064) | |
| 24-258, gnl|panTro1|chr1_random (51348514-51348310) | |
| 24-258, gnl|rheMac2|chr1 (220469976-220469772) | |
| 24-258, gnl|rn3|chr17 (68638751-68638955) | |
| 24-258, gnl|tetNig1|chr2 (2322766-2322574) | |
| 24-258, gnl|xenTro1|scaffold_41 (324100-324304) | |
| 383-547, gnl|bosTau2|chr28 (4495492-4495328) | |
| 383-547, gnl|canFam2|chr4 (6533227-6533086) | |
| 383-547, gnl|danRer3|chr12 (8494344-8494236) | |
| 383-547, gnl|dasNov1|scaffold_48068 (1260-1401) | |
| 383-547, gnl|echTel1|scaffold_317444 (36479-36338) | |
| 383-547, gnl|fr1|chrUn (104155456-104155325) | |
| 383-547, gnl|galGal2|chrUn (20214808-20214949) | |
| 383-547, gnl|hg17|chr1 (233053836-233053977) | |
| 383-547, gnl|Hg17|chr1 (233054004-233053837) | |
| 383-547, gnl|loxAfr1|scaffold_1255 (88918-89059) | |
| 383-547, gnl|mm7|chr13 (12387857-12387716) | |
| 383-547, gnl|Mm7|chr13 (12387690-12387854) | |
| 383-547, gnl|monDom2|scaffold_13 (48891393-48891252) | |
| 383-547, gnl|oryCun1|scaffold_207033 (134999-135140) | |
| 383-547, gnl|panTro1|chr1_random (51350661-51350521) | |
| 383-547, gnl|rheMac2|chr1 (220472079-220471938) | |
| 383-547, gnl|rn3|chr17 (68637223-68637364) | |
| 383-547, gnl|tetNig1|chr2 (2323208-2323090) | |
| 383-547, gnl|xenTro1|scaffold_41 (323379-323517) | |
| 591-718, gnl|bosTau2|chr11 (62917453-62917326) | |
| 591-718, gnl|canFam2|chr4 (6536430-6536298) | |
| 591-718, gnl|danRer3|chr12 (8494712-8494581) | |
| 591-718, gnl|echTel1|scaffold_317444 (43193-43061) | |
| 591-718, gnl|fr1|chrUn (104155982-104155850) | |
| 591-718, gnl|galGal2|chrUn (20213300-20213432) | |
| 591-718, gnl|hg17|chr1 (233049050-233049182) | |
| 591-718, gnl|Hg17|chr1 (233049180-233049053) | |
| 591-718, gnl|loxAfr1|scaffold_18665 (23708-23840) | |
| 591-718, gnl|mm7|chr13 (12391210-12391069) | |
| 591-718, gnl|Mm7|chr13 (12391069-12391205) | |
| 591-718, gnl|monDom2|scaffold_13 (48892161-48892029) | |
| 591-718, gnl|oryCun1|scaffold_207033 (130482-130614) | |
| 591-718, gnl|panTro1|chr1_random (51355444-51355312) | |
| 591-718, gnl|rn3|chr17 (68634382-68634514) | |
| 591-718, gnl|tetNig1|chr2 (2323630-2323502) | |
| 591-718, gnl|xenTro1|scaffold_41 (321541-321678) | |
| 859-1147, gnl|bosTau2|chr11 (62916205-62915917) | |
| 859-1147, gnl|Hg17|chr1 (233047869-233047578) | |
| 859-1147, gnl|Mm7|chr13 (12392611-12392902) | |
| 1295-1457, gnl|bosTau2|chr11 (62913869-62913707) | |
| 1295-1457, gnl|Hg17|chr1 (233045603-233045441) | |
| 1295-1457, gnl|Mm7|chr13 (12394538-12394700) |