Non-Coding RNA Search

Ss1.1-Thy1-THY010072D12.5

Sequence:


               
               TGACCTTCACCGTTTTCCTTGGGTAACCATTTTGACAAATGCCACTTACCCAGTTTCCAT
GATTTAGTCAACTGCAGAAGGAGGCCAGGTGGACTGCCTGTCACGTACAATTCTCTCCAC
TCCATTGAGCACACTCTCAGCTCTCTTTTGCCATTGTCATTCCAATAACCAGGACATGAT
TTATATTTTTTTTGAAAAATGGCTAAGTGAAAACTAACTTTGTGAAAAATTCAGTGATAC
TTAAATTCTAACTTAAATAAATCCAAATTGTCCCTTTTTTTTGGCAGGCATCTAAAAACC
CAGCAGTAAATATTTTTCACACTTTTGAGTAGATCTTTGTGAAACATTCTTGTACTTTTA
AGTTCTAATAATAAAGTAGAAGTCACTATTTTTATTAAGGATCCACTAGCTTCAAAGCAG
AATGCTACCCTTGTAAAAAATAGAAAAATCGAGACACATGCCAAGGAAGTAAGGCATGAA
TAAATCAAACTAAAGCAATAGTTAGAAGGTGACTTGACTATGACGCTATAGGTAGAGCAC
TATGAATATGAAGAAAAGTAGAAGAGAAAATAGAAACCAAGCTGTAGAAAACTGTGTGCC
AAGTACTATGCTAGGTGCTAGACGAACACTGTCATGTAGTCCCACAGTGAAATGGATATT
ATTTCCCACATTCACCAAAAAATAATGTACTGGGAACAATGCAAGCAAAGACATATATGA
AGGAAAGCAAAAACAAACAAACAAAATTATTTAATTTCATTACGTCATAAAATAGGTGAA
GGGAAGAAATGGCATATAAAGTGGGAGGATCTTGGATAATTTCTGGCAAAGAACCAAATC
TCATCAAATATCAATTGAGTGGATATAGGTGAAAGAACAAATATTAGGCTGGCACCCGTT
TGCAGAGATCCTTGAATGTGAAGCGAGACATTTGAACCTCATCTGTTAGTGAGAACGGGT
GGAGGGTTTATAATCAAAGGAGACATGGTTGGAGTTGAACACTTTATTCTTCTTTTCCTG
AGTCACCCTGTGGATTTCGTGTATGCATAAAAAGTTCTGCCGTAAGATTAAAGCATGACC
AGAGTACACTGGTAATGCCCAAGGTTAGCATAATCATCATGCTCATGGGGAGAAGGGAGA
AGATATGTTTATTTGGTACAAAGAAGATTGTGGGGATAAAGAAAAAGGACCTGTGGTCCC
ATGCCGTGTGCCCCATGGGATCTAGAAAGTACCTTCTCGAGCCCTGGGCTGTCTCCAGGT
GCAGCTCACAGATGGGCAGCATCAGCATCACCTGGGAACTTAGTAATAGAATGAATTCTT
GGGCCCCACCTCATACCTTCTGAAACTCTAGCTGTTGGCCCCAAGTGTCTATCTTTTCAT
AAGACCTATGGGTGATTCTGTTACATGCTCAATTTTGAGAACCACTGTTCTAGAGTATTC
TCCCTAGATTAAAAAAAGGAAATCTAGGCATCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACCTTCACCGTTTTCCTTGGGTAACCATTTTGACAAATGCCACTTACCCAGTTTCCAT
GATTTAGTCAACTGCAGAAGGAGGCCAGGTGGACTGCCTGTCACGTACAATTCTCTCCAC
TCCATTGAGCACACTCTCAGCTCTCTTTTGCCATTGTCATTCCAATAACCAGGACATGAT
TTATATTTTTTTTGAAAAATGGCTAAGTGAAAACTAACTTTGTGAAAAATTCAGTGATAC
TTAAATTCTAACTTAAATAAATCCAAATTGTCCCTTTTTTTTGGCAGGCATCTAAAAACC
CAGCAGTAAATATTTTTCACACTTTTGAGTAGATCTTTGTGAAACATTCTTGTACTTTTA
AGTTCTAATAATAAAGTAGAAGTCACTATTTTTATTAAGGATCCACTAGCTTCAAAGCAG
AATGCTACCCTTGTAAAAAATAGAAAAATCGAGACACATGCCAAGGAAGTAAGGCATGAA
TAAATCAAACTAAAGCAATAGTTAGAAGGTGACTTGACTATGACGCTATAGGTAGAGCAC
TATGAATATGAAGAAAAGTAGAAGAGAAAATAGAAACCAAGCTGTAGAAAACTGTGTGCC
AAGTACTATGCTAGGTGCTAGACGAACACTGTCATGTAGTCCCACAGTGAAATGGATATT
ATTTCCCACATTCACCAAAAAATAATGTACTGGGAACAATGCAAGCAAAGACATATATGA
AGGAAAGCAAAAACAAACAAACAAAATTATTTAATTTCATTACGTCATAAAATAGGTGAA
GGGAAGAAATGGCATATAAAGTGGGAGGATCTTGGATAATTTCTGGCAAAGAACCAAATC
TCATCAAATATCAATTGAGTGGATATAGGTGAAAGAACAAATATTAGGCTGGCACCCGTT
TGCAGAGATCCTTGAATGTGAAGCGAGACATTTGAACCTCATCTGTTAGTGAGAACGGGT
GGAGGGTTTATAATCAAAGGAGACATGGTTGGAGTTGAACACTTTATTCTTCTTTTCCTG
AGTCACCCTGTGGATTTCGTGTATGCATAAAAAGTTCTGCCGTAAGATTAAAGCATGACC
AGAGTACACTGGTAATGCCCAAGGTTAGCATAATCATCATGCTCATGGGGAGAAGGGAGA
AGATATGTTTATTTGGTACAAAGAAGATTGTGGGGATAAAGAAAAAGGACCTGTGGTCCC
ATGCCGTGTGCCCCATGGGATCTAGAAAGTACCTTCTCGAGCCCTGGGCTGTCTCCAGGT
GCAGCTCACAGATGGGCAGCATCAGCATCACCTGGGAACTTAGTAATAGAATGAATTCTT
GGGCCCCACCTCATACCTTCTGAAACTCTAGCTGTTGGCCCCAAGTGTCTATCTTTTCAT
AAGACCTATGGGTGATTCTGTTACATGCTCAATTTTGAGAACCACTGTTCTAGAGTATTC
TCCCTAGATTAAAAAAAGGAAATCTAGGCATCCTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               622-738, + strand, RNAz p=0.961997

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               622-738, + strand, RNAz p=0.961997

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               3-1463, gnl|bosTau2|chr14 (12762095-12763556)
               

               
               3-1463, gnl|Hg17|chr8 (59989212-59987604)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-1463, gnl|bosTau2|chr14 (12762095-12763556)
               

               
               3-1463, gnl|Hg17|chr8 (59989212-59987604)

	3-1463, gnl\|bosTau2\|chr14 (12762095-12763556)
	3-1463, gnl\|Hg17\|chr8 (59989212-59987604)