Non-Coding RNA Search

Ss1.1-Thy1-THY010077E05.5

Sequence:


               
               GGACTTCCCGTGTGGCTCACAACATAACTACTCGGC------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CCTCTTTAAACAGAAATAAGTCTCTTGAAGAAATGTGTAACATGGGCT
TTCAGAACATAGAAAACTAGTAGAAAAACTTAATTACTCTTCAACTTTTAAATAAAGTTT
ACCATTTGGTCATGCTACCAAATAAAGAACAGGGAACAAAGGAAATGTATGGTTGCATTT
GGGAATATGATGTGTTGGTAAAAGAATGACTATCTAATTTATTTATTTTAGATGAAAAAG
AGAAATTCGAACCCACAGTCTTCAGGGATACACTCGTCCAGGGGCTTAATGAAGCTGGTG
ATGACCTTGAAGCTGTAGCCAAGTTTCTGGACTCCACAGGCTCAAGATTAGATTATCGTC
GCTATGCAGACACACTCTTCGATATCCTGGTGGCTGGCAGTATGCTTGGTAAACCACATA
TTAGTGTCTTCTTGTCATATATGTGCTTTCCATTCTGTTGAAGTATTTTCTTATGAGATA
GAATCTTTACACGCTTACATCTATGATAGTTGATTTTAAAAAATTACAATGGGAGTCTCT
CTGACCCTTACCTAAATTTGGAATGGTATTAACGTGGCTGTGACATGATTATTGATTAAG
AGAAGCATAGAATTGAGGACCTTCATTGATATTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACTTCCCGTGTGGCTCACAACATAACTACTCGGC------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CCTCTTTAAACAGAAATAAGTCTCTTGAAGAAATGTGTAACATGGGCT
TTCAGAACATAGAAAACTAGTAGAAAAACTTAATTACTCTTCAACTTTTAAATAAAGTTT
ACCATTTGGTCATGCTACCAAATAAAGAACAGGGAACAAAGGAAATGTATGGTTGCATTT
GGGAATATGATGTGTTGGTAAAAGAATGACTATCTAATTTATTTATTTTAGATGAAAAAG
AGAAATTCGAACCCACAGTCTTCAGGGATACACTCGTCCAGGGGCTTAATGAAGCTGGTG
ATGACCTTGAAGCTGTAGCCAAGTTTCTGGACTCCACAGGCTCAAGATTAGATTATCGTC
GCTATGCAGACACACTCTTCGATATCCTGGTGGCTGGCAGTATGCTTGGTAAACCACATA
TTAGTGTCTTCTTGTCATATATGTGCTTTCCATTCTGTTGAAGTATTTTCTTATGAGATA
GAATCTTTACACGCTTACATCTATGATAGTTGATTTTAAAAAATTACAATGGGAGTCTCT
CTGACCCTTACCTAAATTTGGAATGGTATTAACGTGGCTGTGACATGATTATTGATTAAG
AGAAGCATAGAATTGAGGACCTTCATTGATATTCAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q14281_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q14281_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               297-416, - strand, RNAz p=0.763002

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               297-416, - strand, RNAz p=0.763002

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               34-653, gnl|bosTau2|chr4 (8069244-8069852)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-653, gnl|bosTau2|chr4 (8069244-8069852)