Ss1.1-Thy1-THY010088G01.5
               |  | GACTAAAGAGCTATGACGACGCTACTGGTGTCGAAGAAGAAGGAAGGGGACCAAGAGCCA
AAGAACAGGGGTGGCCCTAGAAGGTGAAGAAAGCAAAGACACGGGTCCGTCCCCCGCCCC
CAAAGCCTCTAGAAGGGACACAGCTTTGCTGACACCTTGCTTCCAGCCAGGTGGGACCCA
CTGCGGATTCTGCCCTCCAATGGCAAGCTACTCCAACTAAACGGGTAAGGCAATACACAC
TGCTGTTGCTTTAAGCTAAGCTAAGTTTTTGGCAGTTATTTACACCATCAGTACAAAACC
CAATGTCAGAGTCTCTTCCCCTCCAGCTTGGATGGGTAGGATCTAAATTGCAGAAAATTG
AGAGAAATAGATATGCTTCTTGTCTCTAGTTATGCAAATGATTTCTGTTCACAGAACTGT
AAAAATACGTTGTCTAATAAAAAAATAAAAAGAAGTTCCCATCGTGGCTCTGCTTAAATG
AATCTGACTGGTATCCATGAAGACACAGGTTCGATCCCTGTCCAGGGATCCAGCACTGCC
GTGAGCTGAGATGTAGGTTACAGACACAGCTCAGATCTGGCTTTGCTACGGCTTGGTGCA
GGCCAGCGGCTATAGCTCGGATTCGACCCCTAGCCTGGGAACCTCCATAGGCCGCAGGTG
CAGCCCTAAAGAGACAAAAACAAAAACAAAATGTTGCCTAGCAGGTTAAATTCTCATTTG
AATTGCTTTTAACCTCTTATTGGTTTTTTCATTATTTAATGAGTTGAATAAAATCTTTGA
CACGTGTTTTAAAGAGAACTACGATGATTAAACTCAATGCATGATTTTGACTTGATCTTG
AATTAAAAAATAAAATAAAAAAAC | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | GACTAAAGAGCTATGACGACGCTACTGGTGTCGAAGAAGAAGGAAGGGGACCAAGAGCCA
AAGAACAGGGGTGGCCCTAGAAGGTGAAGAAAGCAAAGACACGGGTCCGTCCCCCGCCCC
CAAAGCCTCTAGAAGGGACACAGCTTTGCTGACACCTTGCTTCCAGCCAGGTGGGACCCA
CTGCGGATTCTGCCCTCCAATGGCAAGCTACTCCAACTAAACGGGTAAGGCAATACACAC
TGCTGTTGCTTTAAGCTAAGCTAAGTTTTTGGCAGTTATTTACACCATCAGTACAAAACC
CAATGTCAGAGTCTCTTCCCCTCCAGCTTGGATGGGTAGGATCTAAATTGCAGAAAATTG
AGAGAAATAGATATGCTTCTTGTCTCTAGTTATGCAAATGATTTCTGTTCACAGAACTGT
AAAAATACGTTGTCTAATAAAAAAATAAAAAGAAGTTCCCATCGTGGCTCTGCTTAAATG
AATCTGACTGGTATCCATGAAGACACAGGTTCGATCCCTGTCCAGGGATCCAGCACTGCC
GTGAGCTGAGATGTAGGTTACAGACACAGCTCAGATCTGGCTTTGCTACGGCTTGGTGCA
GGCCAGCGGCTATAGCTCGGATTCGACCCCTAGCCTGGGAACCTCCATAGGCCGCAGGTG
CAGCCCTAAAGAGACAAAAACAAAAACAAAATGTTGCCTAGCAGGTTAAATTCTCATTTG
AATTGCTTTTAACCTCTTATTGGTTTTTTCATTATTTAATGAGTTGAATAAAATCTTTGA
CACGTGTTTTAAAGAGAACTACGATGATTAAACTCAATGCATGATTTTGACTTGATCTTG
AATTAAAAAATAAAATAAAAAAAC | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map