Non-Coding RNA Search

Ss1.1-Thy1-THY010089E11.5

Sequence:


               
               CTCTGAACGGCCTTGCCTGGCTCGGTGCCCCAGCAAATGACGGAGAACCCAAGAACTTCT
TGGAAAAATGACCCAGCGTGTTTGCAGAGTTGATGGTACATTGGGTGGAGGACGCTAGCA
GCCTGCGCCCTCCCCCGCCCTGACGCTGGATTCTGCCTCGACGCAGGTGGATGCCCGCAA
CATTGACGGCAGCACCCCGCTCTGTGACGCCTGCGCCTCAGGCAGCGTGGAGTGCGTGAA
ACTGCTGCTCTCCTACGGGGCCAAGGTCAACCCCCCCCTCTACACGGCGTCCCCGCTCCA
CGAGGCCTGCATGAGCGGAAGTTCTGAGTGTGTGAGGCTTCTTATCGACGTTGGGGCCAA
TCTGGAAGCGCACGACTGCCACTTCGGGACCCCGCTGCACGTCGCCTGCGCCCGCGAGCA
TCTGGACTGCGTCAAAGTGCTTCTCAACGCAGGGGCCAGGGCTCCAGTTCCAGCCGAGTC
ACTGCCTTTCGAGATGCCACCCCTGGAGGCAGGTCCCCTCTGTGCCCCTCACCCGGCGCT
GCTGACCTCCTGCCCTGCGGCCCCATCTCTTGGGAGAGGCAGTCCAGGCGCATCCCCGAG
GGAGGCGGGTGCTCTCAGAGCAGCGGGGAGCTGGTCCCTGAAGCTCAGACCTCTGACCCT
GTCCCAGCTCTGCAGGGTGAGCCTGCGGAGGGCCACCGGCGTCCGAGGCCTGGAGAAAAT
CGCCAAGCTGAACATCCCTGCCCGGCTCATTGAGTACCTCTCCTACAACTGAGCTGCCGA
CACGGCGTCGGGGCCGGCGGGGGACTCCTGGCTGCTGGCCTTGCTGGGCCCAGCGACAGG
GGGCTCTGCCCTGGCTGCCCGAGCCGTGCCACTGGTGGAGAGAACAGCGTGCCCGACCGC
CCTGTCCGGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTGAACGGCCTTGCCTGGCTCGGTGCCCCAGCAAATGACGGAGAACCCAAGAACTTCT
TGGAAAAATGACCCAGCGTGTTTGCAGAGTTGATGGTACATTGGGTGGAGGACGCTAGCA
GCCTGCGCCCTCCCCCGCCCTGACGCTGGATTCTGCCTCGACGCAGGTGGATGCCCGCAA
CATTGACGGCAGCACCCCGCTCTGTGACGCCTGCGCCTCAGGCAGCGTGGAGTGCGTGAA
ACTGCTGCTCTCCTACGGGGCCAAGGTCAACCCCCCCCTCTACACGGCGTCCCCGCTCCA
CGAGGCCTGCATGAGCGGAAGTTCTGAGTGTGTGAGGCTTCTTATCGACGTTGGGGCCAA
TCTGGAAGCGCACGACTGCCACTTCGGGACCCCGCTGCACGTCGCCTGCGCCCGCGAGCA
TCTGGACTGCGTCAAAGTGCTTCTCAACGCAGGGGCCAGGGCTCCAGTTCCAGCCGAGTC
ACTGCCTTTCGAGATGCCACCCCTGGAGGCAGGTCCCCTCTGTGCCCCTCACCCGGCGCT
GCTGACCTCCTGCCCTGCGGCCCCATCTCTTGGGAGAGGCAGTCCAGGCGCATCCCCGAG
GGAGGCGGGTGCTCTCAGAGCAGCGGGGAGCTGGTCCCTGAAGCTCAGACCTCTGACCCT
GTCCCAGCTCTGCAGGGTGAGCCTGCGGAGGGCCACCGGCGTCCGAGGCCTGGAGAAAAT
CGCCAAGCTGAACATCCCTGCCCGGCTCATTGAGTACCTCTCCTACAACTGAGCTGCCGA
CACGGCGTCGGGGCCGGCGGGGGACTCCTGGCTGCTGGCCTTGCTGGGCCCAGCGACAGG
GGGCTCTGCCCTGGCTGCCCGAGCCGTGCCACTGGTGGAGAGAACAGCGTGCCCGACCGC
CCTGTCCGGTCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|48146721|emb|CAG33583.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|48146721|emb|CAG33583.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               43-318, gnl|bosTau2|chr13 (27733363-27733095)
               

               
               43-318, gnl|Hg17|chr10 (5733425-5733181)
               

               
               43-318, gnl|Mm7|chr13 (3527753-3527995)
               


               
               650-839, gnl|bosTau2|chr13 (27729890-27729700)
               

               
               650-839, gnl|Hg17|chr10 (5722794-5722594)
               

               
               650-839, gnl|Mm7|chr13 (3534554-3534771)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               43-318, gnl|bosTau2|chr13 (27733363-27733095)
               

               
               43-318, gnl|Hg17|chr10 (5733425-5733181)
               

               
               43-318, gnl|Mm7|chr13 (3527753-3527995)
               


               
               650-839, gnl|bosTau2|chr13 (27729890-27729700)
               

               
               650-839, gnl|Hg17|chr10 (5722794-5722594)
               

               
               650-839, gnl|Mm7|chr13 (3534554-3534771)

	43-318, gnl\|bosTau2\|chr13 (27733363-27733095)
	43-318, gnl\|Hg17\|chr10 (5733425-5733181)
	43-318, gnl\|Mm7\|chr13 (3527753-3527995)

	650-839, gnl\|bosTau2\|chr13 (27729890-27729700)
	650-839, gnl\|Hg17\|chr10 (5722794-5722594)
	650-839, gnl\|Mm7\|chr13 (3534554-3534771)