Ss1.1-Thy1-THY010093F06.5
               |  | TTCGGTGGGGTCACACTTGTTGCGTGACTCCCCCACAGTGCAGCTACCGGAGTCCGACCC
CGCATACCCAGAAAGTGTGGAGAGAAACCCAGACGAATTCCGGGTCCCGCTCTCTGGGGA
GCACGTGGCCTGCCTGCCTCTCGAGTGCGGGGCCCGGGGGTGGGACTCCGGGGTCTCTAA
GGCCGGTGCCGCGGCCCAGGTCGGCAGGGATCTGCCTCCCACCTGCCGGCAATTTTGAAG
GACTGCTTTACTCCTTCCATCTTAGTGCCAGGGCAGGGGTCCTTAGAGCGACTTGGCGGG
GTCTGGACCCCAGCCCTCTTCCCTTCCCTCGCCACCTGGCTTCCCGGCGGTGTAGACCCT
GGCGAGCAGACTCCCCGGTACTGCACAGGGCTCGAGCAGCATGGCCTCAGAGGCTCGGGG
TGGGCTGGGGGCCCCCCCGCTGCAGTCTGCCCGATCCCTGCCAGGCCCTGCCCCCTGCCT
CAAGCACTTCCCGCTCGACCTGCGCACGTCTATGGATGGCAAATGCAAGGAGATCGCCGA
GGAGTTGTTCAGCCGCTCCCTGGCGGAGAGTGAGCTCCGAAGCGCCCCCTACGAGTTCCC
CGAGGAGAGTCCCATTGAGCAGCTGGAGGAGCGGCGGCAGCGCCTGGAGCGGCAGATCAG
CCAGGATGTCAAGCTGGAGCCGGACATCCTATTTCGGGCCCAGCAAGATTTCCTGAAGAC | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | TTCGGTGGGGTCACACTTGTTGCGTGACTCCCCCACAGTGCAGCTACCGGAGTCCGACCC
CGCATACCCAGAAAGTGTGGAGAGAAACCCAGACGAATTCCGGGTCCCGCTCTCTGGGGA
GCACGTGGCCTGCCTGCCTCTCGAGTGCGGGGCCCGGGGGTGGGACTCCGGGGTCTCTAA
GGCCGGTGCCGCGGCCCAGGTCGGCAGGGATCTGCCTCCCACCTGCCGGCAATTTTGAAG
GACTGCTTTACTCCTTCCATCTTAGTGCCAGGGCAGGGGTCCTTAGAGCGACTTGGCGGG
GTCTGGACCCCAGCCCTCTTCCCTTCCCTCGCCACCTGGCTTCCCGGCGGTGTAGACCCT
GGCGAGCAGACTCCCCGGTACTGCACAGGGCTCGAGCAGCATGGCCTCAGAGGCTCGGGG
TGGGCTGGGGGCCCCCCCGCTGCAGTCTGCCCGATCCCTGCCAGGCCCTGCCCCCTGCCT
CAAGCACTTCCCGCTCGACCTGCGCACGTCTATGGATGGCAAATGCAAGGAGATCGCCGA
GGAGTTGTTCAGCCGCTCCCTGGCGGAGAGTGAGCTCCGAAGCGCCCCCTACGAGTTCCC
CGAGGAGAGTCCCATTGAGCAGCTGGAGGAGCGGCGGCAGCGCCTGGAGCGGCAGATCAG
CCAGGATGTCAAGCTGGAGCCGGACATCCTATTTCGGGCCCAGCAAGATTTCCTGAAGAC | 
               |  | 1-410, gnl|bosTau2|chr3 (25844250-25843841) | 
               |  | 1-410, gnl|Hg17|chr1 (109874536-109874942) | 
               |  | 1-410, gnl|Mm7|chr3 (107904910-107904506) | 
| 
 |  | 
               |  | 540-673, gnl|bosTau2|chr3 (25838675-25838542) | 
               |  | 540-673, gnl|canFam2|chr6 (45305559-45305397) | 
               |  | 540-673, gnl|danRer3|chr8 (21696394-21696242) | 
               |  | 540-673, gnl|dasNov1|scaffold_27006 (18854-19008) | 
               |  | 540-673, gnl|echTel1|scaffold_191932 (5809-5681) | 
               |  | 540-673, gnl|fr1|chrUn (46022951-46022813) | 
               |  | 540-673, gnl|hg17|chr1 (109880320-109880488) | 
               |  | 540-673, gnl|Hg17|chr1 (109880324-109880457) | 
               |  | 540-673, gnl|mm7|chr3 (107899078-107898919) | 
               |  | 540-673, gnl|Mm7|chr3 (107899064-107898931) | 
               |  | 540-673, gnl|monDom2|scaffold_0 (6967971-6967805) | 
               |  | 540-673, gnl|panTro1|chr1 (108811071-108811239) | 
               |  | 540-673, gnl|rheMac2|chr1 (112685780-112685948) | 
               |  | 540-673, gnl|rn3|chr2 (203602858-203602699) | 
               |  | 540-673, gnl|tetNig1|chr11 (5966635-5966777) | 
               |  | 540-673, gnl|xenTro1|scaffold_19 (2124512-2124654) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 1-410, gnl|bosTau2|chr3 (25844250-25843841) | 
               |  | 1-410, gnl|Hg17|chr1 (109874536-109874942) | 
               |  | 1-410, gnl|Mm7|chr3 (107904910-107904506) | 
| 
 |  | 
               |  | 540-673, gnl|bosTau2|chr3 (25838675-25838542) | 
               |  | 540-673, gnl|canFam2|chr6 (45305559-45305397) | 
               |  | 540-673, gnl|danRer3|chr8 (21696394-21696242) | 
               |  | 540-673, gnl|dasNov1|scaffold_27006 (18854-19008) | 
               |  | 540-673, gnl|echTel1|scaffold_191932 (5809-5681) | 
               |  | 540-673, gnl|fr1|chrUn (46022951-46022813) | 
               |  | 540-673, gnl|hg17|chr1 (109880320-109880488) | 
               |  | 540-673, gnl|Hg17|chr1 (109880324-109880457) | 
               |  | 540-673, gnl|mm7|chr3 (107899078-107898919) | 
               |  | 540-673, gnl|Mm7|chr3 (107899064-107898931) | 
               |  | 540-673, gnl|monDom2|scaffold_0 (6967971-6967805) | 
               |  | 540-673, gnl|panTro1|chr1 (108811071-108811239) | 
               |  | 540-673, gnl|rheMac2|chr1 (112685780-112685948) | 
               |  | 540-673, gnl|rn3|chr2 (203602858-203602699) | 
               |  | 540-673, gnl|tetNig1|chr11 (5966635-5966777) | 
               |  | 540-673, gnl|xenTro1|scaffold_19 (2124512-2124654) |