Ss1.1-Thy1-THY010103H08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCACTTGCTGTGACAACGGTAGTAACACCCTGTGCAGGTGTACCAGGTCTGAATGAGTCC CCAGATGATGGTGTTGCACTTGTCACAGGTGTGCTTCACGCTCTTGCTCTTCTCCTTGTA GAAGCGGTGCTCGAGAAGGACTCGGATGTTGGGTTCATCCTCGTTGGGGTCCTTCAGCTC CTGGAGCTTCAGCCGCAGGTGGACGAGCCGCACCACAGCGTCCTTCTGCTTCTCCGAGTG CTCGGGAAGCTCCAGGATGGCCTCCTTGCACTCCTGGATGGCCTGCCGCAGCTGCTGGAC ATCAGAGGCCAGGAACAGGCCCACCGGCCGGGCAAAGTGGTCCTCGGACAGGCCGAGATC CATCACGCGCTCTGGACAGCGGAACTCCGGTTCCCCAGGGGGCAGCTCAGGCAGGGCCTC TCCGGCTCTGGCGTCCAGGGCCTCCTCACCAGCCCCCCGCTCATGCTGCTTGTCGAAGGG GTTGAGGTGCACCTGCCGGAACCGGCCACCGCCCCCATCATATTCCATACACCCCACCTG ACCGCCGCCGCCCCGCCCCCGTACATGTCCGTAGCCACAGTGCTGAGAATTCCGACCGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCACTTGCTGTGACAACGGTAGTAACACCCTGTGCAGGTGTACCAGGTCTGAATGAGTCC CCAGATGATGGTGTTGCACTTGTCACAGGTGTGCTTCACGCTCTTGCTCTTCTCCTTGTA GAAGCGGTGCTCGAGAAGGACTCGGATGTTGGGTTCATCCTCGTTGGGGTCCTTCAGCTC CTGGAGCTTCAGCCGCAGGTGGACGAGCCGCACCACAGCGTCCTTCTGCTTCTCCGAGTG CTCGGGAAGCTCCAGGATGGCCTCCTTGCACTCCTGGATGGCCTGCCGCAGCTGCTGGAC ATCAGAGGCCAGGAACAGGCCCACCGGCCGGGCAAAGTGGTCCTCGGACAGGCCGAGATC CATCACGCGCTCTGGACAGCGGAACTCCGGTTCCCCAGGGGGCAGCTCAGGCAGGGCCTC TCCGGCTCTGGCGTCCAGGGCCTCCTCACCAGCCCCCCGCTCATGCTGCTTGTCGAAGGG GTTGAGGTGCACCTGCCGGAACCGGCCACCGCCCCCATCATATTCCATACACCCCACCTG ACCGCCGCCGCCCCGCCCCCGTACATGTCCGTAGCCACAGTGCTGAGAATTCCGACCGTA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 213-322, - strand, RNAz p=0.895437 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 213-322, - strand, RNAz p=0.895437 |
| Aligned organism(s): 43 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
| 171-322, gnl|bosTau2|chr18 (15618247-15618096) | |
| 171-322, gnl|canFam2|chr5 (66662969-66662782) | |
| 171-322, gnl|danRer3|chr18 (29825057-29824892) | |
| 171-322, gnl|echTel1|scaffold_176836 (4858-5036) | |
| 171-322, gnl|fr1|chrUn (123088592-123088402) | |
| 171-322, gnl|hg17|chr16 (88551404-88551591) | |
| 171-322, gnl|Hg17|chr16 (88551570-88551419) | |
| 171-322, gnl|mm7|chr8 (122093799-122093979) | |
| 171-322, gnl|Mm7|chr8 (122093965-122093814) | |
| 171-322, gnl|monDom2|scaffold_23 (5740143-5739959) | |
| 171-322, gnl|panTro1|chr18 (83581958-83582130) | |
| 171-322, gnl|rheMac2|chr20 (88087997-88088184) | |
| 171-322, gnl|rn3|chr19 (53774755-53774942) | |
| 171-322, gnl|tetNig1|chr5 (4937836-4937668) | |
| 435-540, gnl|bosTau2|chr18 (15616174-15616065) | |
| 435-540, gnl|canFam2|chr5 (66665676-66665592) | |
| 435-540, gnl|canFam2|chr5 (66665696-66665564) | |
| 435-540, gnl|echTel1|scaffold_176836 (663-747) | |
| 435-540, gnl|echTel1|scaffold_176836 (645-775) | |
| 435-540, gnl|fr1|chrUn (123090678-123090613) | |
| 435-540, gnl|fr1|chrUn (123090700-123090584) | |
| 435-540, gnl|hg17|chr16 (88548132-88548262) | |
| 435-540, gnl|Hg17|chr16 (88548270-88548149) | |
| 435-540, gnl|hg17|chr17 (20456575-20456659) | |
| 435-540, gnl|loxAfr1|scaffold_167572 (109-193) | |
| 435-540, gnl|loxAfr1|scaffold_167572 (95-221) | |
| 435-540, gnl|mm7|chr8 (122088856-122088940) | |
| 435-540, gnl|mm7|chr8 (122088837-122088968) | |
| 435-540, gnl|Mm7|chr8 (122088972-122088855) | |
| 435-540, gnl|monDom2|scaffold_23 (5745993-5745922) | |
| 435-540, gnl|monDom2|scaffold_23 (5746002-5745885) | |
| 435-540, gnl|oryCun1|scaffold_94146 (3202-3119) | |
| 435-540, gnl|oryCun1|scaffold_94146 (3221-3091) | |
| 435-540, gnl|panTro1|chr18 (83578686-83578816) | |
| 435-540, gnl|panTro1|chr19 (20782076-20782160) | |
| 435-540, gnl|rheMac2|chr20 (88084749-88084833) | |
| 435-540, gnl|rheMac2|chr20 (88084731-88084861) | |
| 435-540, gnl|rn3|chr19 (53770576-53770660) | |
| 435-540, gnl|rn3|chr19 (53770557-53770688) | |
| 435-540, gnl|tetNig1|chr5 (4939673-4939608) | |
| 435-540, gnl|tetNig1|chr5 (4939673-4939579) | |
| 435-540, gnl|xenTro1|scaffold_13 (3360755-3360666) | |
| 435-540, gnl|xenTro1|scaffold_13 (3360768-3360641) |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 171-322, gnl|bosTau2|chr18 (15618247-15618096) | |
| 171-322, gnl|canFam2|chr5 (66662969-66662782) | |
| 171-322, gnl|danRer3|chr18 (29825057-29824892) | |
| 171-322, gnl|echTel1|scaffold_176836 (4858-5036) | |
| 171-322, gnl|fr1|chrUn (123088592-123088402) | |
| 171-322, gnl|hg17|chr16 (88551404-88551591) | |
| 171-322, gnl|Hg17|chr16 (88551570-88551419) | |
| 171-322, gnl|mm7|chr8 (122093799-122093979) | |
| 171-322, gnl|Mm7|chr8 (122093965-122093814) | |
| 171-322, gnl|monDom2|scaffold_23 (5740143-5739959) | |
| 171-322, gnl|panTro1|chr18 (83581958-83582130) | |
| 171-322, gnl|rheMac2|chr20 (88087997-88088184) | |
| 171-322, gnl|rn3|chr19 (53774755-53774942) | |
| 171-322, gnl|tetNig1|chr5 (4937836-4937668) | |
| 435-540, gnl|bosTau2|chr18 (15616174-15616065) | |
| 435-540, gnl|canFam2|chr5 (66665676-66665592) | |
| 435-540, gnl|canFam2|chr5 (66665696-66665564) | |
| 435-540, gnl|echTel1|scaffold_176836 (663-747) | |
| 435-540, gnl|echTel1|scaffold_176836 (645-775) | |
| 435-540, gnl|fr1|chrUn (123090678-123090613) | |
| 435-540, gnl|fr1|chrUn (123090700-123090584) | |
| 435-540, gnl|hg17|chr16 (88548132-88548262) | |
| 435-540, gnl|Hg17|chr16 (88548270-88548149) | |
| 435-540, gnl|hg17|chr17 (20456575-20456659) | |
| 435-540, gnl|loxAfr1|scaffold_167572 (109-193) | |
| 435-540, gnl|loxAfr1|scaffold_167572 (95-221) | |
| 435-540, gnl|mm7|chr8 (122088856-122088940) | |
| 435-540, gnl|mm7|chr8 (122088837-122088968) | |
| 435-540, gnl|Mm7|chr8 (122088972-122088855) | |
| 435-540, gnl|monDom2|scaffold_23 (5745993-5745922) | |
| 435-540, gnl|monDom2|scaffold_23 (5746002-5745885) | |
| 435-540, gnl|oryCun1|scaffold_94146 (3202-3119) | |
| 435-540, gnl|oryCun1|scaffold_94146 (3221-3091) | |
| 435-540, gnl|panTro1|chr18 (83578686-83578816) | |
| 435-540, gnl|panTro1|chr19 (20782076-20782160) | |
| 435-540, gnl|rheMac2|chr20 (88084749-88084833) | |
| 435-540, gnl|rheMac2|chr20 (88084731-88084861) | |
| 435-540, gnl|rn3|chr19 (53770576-53770660) | |
| 435-540, gnl|rn3|chr19 (53770557-53770688) | |
| 435-540, gnl|tetNig1|chr5 (4939673-4939608) | |
| 435-540, gnl|tetNig1|chr5 (4939673-4939579) | |
| 435-540, gnl|xenTro1|scaffold_13 (3360755-3360666) | |
| 435-540, gnl|xenTro1|scaffold_13 (3360768-3360641) |