Non-Coding RNA Search

Ss1.1-Thy1-THY010104A01.5

Sequence:


               
               CCGAGGGGGAGGACCTTGAACAAGTAGTCAAAGTTCTCGTCTGCTGCCCTGGGTGAGCTG
GAGAATTGCATGACTCTGGCTGCC------------------------------------
------------------------------------------------------------
------------------------------------------------GCTCGTCAGGTG
ATGCCCCGAGGTCGGACTACAACTCCCAGCATGCCGCGGGGACGGCGGCTCACGTGAGCG
CCCGGAAACCCAGGTCTAGGCGGCGCGGGTGAGGTGGCGGCAGGAGTGGCGGAGTTGCGG
GCGCGACGGCGCGAGCGGAGCAGTCGGCTGAAGCGCTGCGACGAATGCGGGTCTCGGAAA
GAAGAAATGACGTAACCCATTCAGTATCCAAACTCTAAGGTCAAGGTGAGAAGGAAGGTC
AGGAAGAACATGGCCTGGCCAAATATTCTTCAGAGAGGTACCCTGCTGTCCCGCTTCAGC
CACCATCATGTGGTCGTGTTCCTGCTCACCTTCTTCAGTTACTCGTTGCTCCACGCGTCA
AGAAAAACATTTAGCAACGTCAAAGTCAGTATCTCTAAGCAGTGGACCCCAAGTGCTTTT
AACAAGTCAGTTGACCTGCCTGTAGAGATTTGGAGCAGAAACCGTCTTTTTCCCAGTGCG
GAGGAGGCCACTCTGTTCCTCGGAACTCTGGACACCGTCTTCCTCTTCTCGTACGCTGTG
GGCCTTTTCATCAGCGGTATCATTGGGGATCGGCTTAATTTGCGGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGAGGGGGAGGACCTTGAACAAGTAGTCAAAGTTCTCGTCTGCTGCCCTGGGTGAGCTG
GAGAATTGCATGACTCTGGCTGCC------------------------------------
------------------------------------------------------------
------------------------------------------------GCTCGTCAGGTG
ATGCCCCGAGGTCGGACTACAACTCCCAGCATGCCGCGGGGACGGCGGCTCACGTGAGCG
CCCGGAAACCCAGGTCTAGGCGGCGCGGGTGAGGTGGCGGCAGGAGTGGCGGAGTTGCGG
GCGCGACGGCGCGAGCGGAGCAGTCGGCTGAAGCGCTGCGACGAATGCGGGTCTCGGAAA
GAAGAAATGACGTAACCCATTCAGTATCCAAACTCTAAGGTCAAGGTGAGAAGGAAGGTC
AGGAAGAACATGGCCTGGCCAAATATTCTTCAGAGAGGTACCCTGCTGTCCCGCTTCAGC
CACCATCATGTGGTCGTGTTCCTGCTCACCTTCTTCAGTTACTCGTTGCTCCACGCGTCA
AGAAAAACATTTAGCAACGTCAAAGTCAGTATCTCTAAGCAGTGGACCCCAAGTGCTTTT
AACAAGTCAGTTGACCTGCCTGTAGAGATTTGGAGCAGAAACCGTCTTTTTCCCAGTGCG
GAGGAGGCCACTCTGTTCCTCGGAACTCTGGACACCGTCTTCCTCTTCTCGTACGCTGTG
GGCCTTTTCATCAGCGGTATCATTGGGGATCGGCTTAATTTGCGGTTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13543141|gb|AAH05744.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13543141|gb|AAH05744.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               80-237, gnl|bosTau2|chr4 (57471879-57471722)
               

               
               80-237, gnl|Hg17|chr7 (139551594-139551444)
               

               
               80-237, gnl|Mm7|chr6 (39307928-39307794)
               


               
               273-437, gnl|bosTau2|chr4 (57464102-57463938)
               

               
               273-437, gnl|Hg17|chr7 (139535581-139535419)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               80-237, gnl|bosTau2|chr4 (57471879-57471722)
               

               
               80-237, gnl|Hg17|chr7 (139551594-139551444)
               

               
               80-237, gnl|Mm7|chr6 (39307928-39307794)
               


               
               273-437, gnl|bosTau2|chr4 (57464102-57463938)
               

               
               273-437, gnl|Hg17|chr7 (139535581-139535419)

	80-237, gnl\|bosTau2\|chr4 (57471879-57471722)
	80-237, gnl\|Hg17\|chr7 (139551594-139551444)
	80-237, gnl\|Mm7\|chr6 (39307928-39307794)

	273-437, gnl\|bosTau2\|chr4 (57464102-57463938)
	273-437, gnl\|Hg17\|chr7 (139535581-139535419)