Ss1.1-Thy1-THY010113E10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGTCGGTCGGAATCCTCAGCCTGTTGGCCTACTGGTAAGCGGAGACCTGCTTTCAAAC GCTGTGTCGCGGGTCTCTGGCGCTTCGCAGGAGTCAGCGCGCTAGGACGGGAACAGGCGG GGGGACTGCACTGCTCACAACTGAGCCTGACCGAGCGGACCCTCAGAGCCGCCTGGCTTT TGGAGCCTTTAAGATTGAAGTCTATGATTGACAGCTTCCAGGACTGCGGCTCGAGAGTTC AGCGCTCCTTCGCCCGTACCTGTCCCCCTCTGTCACACGCTCTACCCTGTGAGGTGCAGC ATTAATCAAGTCACCCCCCCCCACTCGCCACTGCCACCCGCGTCTGCGTCAACTTGGTTC TTAACCTCCTTCACCCAAGAACCCCTCCCCTCTGCCTCCGGAAAAGGTCTTTTTTTGCCT AGTTCTTGTAAAATTAAGGGGGTATCCTGCAGAAAGTTATCTTCAAAACTGACACCATCT GATACTCCCCAAAAGTTCATGCTTGCTAGGGAGTTTGTGTGCAAAGCAAAACCCAGTGCA CACAGGAAACTATGGCTGAACATGGGGCTCACATCACAACTGCTTCTGTAGTGGATGACC AGCCATCCATCTTTGAAGTGGTAGCCCAGGAAAGTTTAATGACAGCAGTGAGACCTGCTC TTCAGCATGTGGTCAAGGTTCTTGCAGAATCAAATCCTGCCCACTATGGCTTCTTTTGGA GATGGTTTGATGAAATTTTTACCGTGCTGGATCTTTTGCTCCAGCAGCATTATCTGTCTA AAACCAGTGCCTCGTTTTCTGAAAACTTTTATGGCTTAAAGAGGATTGTAATGGGAGACA CACAGAAGCTTCAGAGATTGGCCAGTGCTGGTCTCCCAAAGAGGCAGCTCTGGAAGTCAA TTATGTTCCTGGTTCTTCTTCCCTATCTGAAAGTGAAGCTGGAGAAGCTAGTTTCCAGCC TGAGAGAAGAGGATGAATATTCCATCCATCCCCCTTCTTCCCGCTGGAAGCAATTTTACA GAGCCTTCCTGGCAGCCTACCCATTTGTTAACATGGCCTGGGAAGGCTGGTTTCTAGTAC AACAGCTTCAGTACATCCTAGGAAAGGCTCAGCATCACTCACCACTGCTGAGTCTGGCTG GAGTTCGCCTTGGGAGGCTTACAGTTCATGATATACAAGCTCTGGAGCACAAACCAGCTG AAGCCAGCATGATGCAGCAACCTGCTGGGAGGTAAGACTTTAACATTTCCCCCANATCTT TGATTGATAAATTCTAAAAGCTTATCCAAATTTTATGAAACTCACCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGTCGGTCGGAATCCTCAGCCTGTTGGCCTACTGGTAAGCGGAGACCTGCTTTCAAAC GCTGTGTCGCGGGTCTCTGGCGCTTCGCAGGAGTCAGCGCGCTAGGACGGGAACAGGCGG GGGGACTGCACTGCTCACAACTGAGCCTGACCGAGCGGACCCTCAGAGCCGCCTGGCTTT TGGAGCCTTTAAGATTGAAGTCTATGATTGACAGCTTCCAGGACTGCGGCTCGAGAGTTC AGCGCTCCTTCGCCCGTACCTGTCCCCCTCTGTCACACGCTCTACCCTGTGAGGTGCAGC ATTAATCAAGTCACCCCCCCCCACTCGCCACTGCCACCCGCGTCTGCGTCAACTTGGTTC TTAACCTCCTTCACCCAAGAACCCCTCCCCTCTGCCTCCGGAAAAGGTCTTTTTTTGCCT AGTTCTTGTAAAATTAAGGGGGTATCCTGCAGAAAGTTATCTTCAAAACTGACACCATCT GATACTCCCCAAAAGTTCATGCTTGCTAGGGAGTTTGTGTGCAAAGCAAAACCCAGTGCA CACAGGAAACTATGGCTGAACATGGGGCTCACATCACAACTGCTTCTGTAGTGGATGACC AGCCATCCATCTTTGAAGTGGTAGCCCAGGAAAGTTTAATGACAGCAGTGAGACCTGCTC TTCAGCATGTGGTCAAGGTTCTTGCAGAATCAAATCCTGCCCACTATGGCTTCTTTTGGA GATGGTTTGATGAAATTTTTACCGTGCTGGATCTTTTGCTCCAGCAGCATTATCTGTCTA AAACCAGTGCCTCGTTTTCTGAAAACTTTTATGGCTTAAAGAGGATTGTAATGGGAGACA CACAGAAGCTTCAGAGATTGGCCAGTGCTGGTCTCCCAAAGAGGCAGCTCTGGAAGTCAA TTATGTTCCTGGTTCTTCTTCCCTATCTGAAAGTGAAGCTGGAGAAGCTAGTTTCCAGCC TGAGAGAAGAGGATGAATATTCCATCCATCCCCCTTCTTCCCGCTGGAAGCAATTTTACA GAGCCTTCCTGGCAGCCTACCCATTTGTTAACATGGCCTGGGAAGGCTGGTTTCTAGTAC AACAGCTTCAGTACATCCTAGGAAAGGCTCAGCATCACTCACCACTGCTGAGTCTGGCTG GAGTTCGCCTTGGGAGGCTTACAGTTCATGATATACAAGCTCTGGAGCACAAACCAGCTG AAGCCAGCATGATGCAGCAACCTGCTGGGAGGTAAGACTTTAACATTTCCCCCANATCTT TGATTGATAAATTCTAAAAGCTTATCCAAATTTTATGAAACTCACCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 676-1114, - strand, RNAz p=0.989906 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 676-1114, - strand, RNAz p=0.989906 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 39-147, gnl|bosTau2|chr19 (8140818-8140926) | |
| 39-147, gnl|canFam2|chr9 (41406371-41406134) | |
| 39-147, gnl|canFam2|chr9 (41406243-41406336) | |
| 39-147, gnl|dasNov1|scaffold_122267 (3563-3782) | |
| 39-147, gnl|dasNov1|scaffold_122267 (3694-3592) | |
| 39-147, gnl|echTel1|scaffold_156680 (6659-6830) | |
| 39-147, gnl|echTel1|scaffold_156680 (6760-6669) | |
| 39-147, gnl|hg17|chr13 (89441591-89441706) | |
| 39-147, gnl|hg17|chr17 (30929513-30929752) | |
| 39-147, gnl|Hg17|chr17 (30929697-30929589) | |
| 39-147, gnl|loxAfr1|scaffold_43989 (4488-4251) | |
| 39-147, gnl|loxAfr1|scaffold_43989 (4342-4453) | |
| 39-147, gnl|mm7|chr11 (83368697-83368854) | |
| 39-147, gnl|Mm7|chr11 (83368799-83368701) | |
| 39-147, gnl|oryCun1|scaffold_44817 (240-8) | |
| 39-147, gnl|oryCun1|scaffold_44817 (103-205) | |
| 39-147, gnl|panTro1|chr14 (72398824-72398939) | |
| 39-147, gnl|panTro1|chr19 (34450731-34450970) | |
| 39-147, gnl|rheMac2|chr16 (30843450-30843691) | |
| 39-147, gnl|rheMac2|chr17 (70533712-70533827) | |
| 39-147, gnl|rn3|chr10 (71395764-71395921) | |
| 676-1308, gnl|bosTau2|chr19 (8141779-8142409) | |
| 676-1308, gnl|Hg17|chr17 (30928725-30928093) | |
| 676-1308, gnl|Mm7|chr11 (83367948-83367338) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 39-147, gnl|bosTau2|chr19 (8140818-8140926) | |
| 39-147, gnl|canFam2|chr9 (41406371-41406134) | |
| 39-147, gnl|canFam2|chr9 (41406243-41406336) | |
| 39-147, gnl|dasNov1|scaffold_122267 (3563-3782) | |
| 39-147, gnl|dasNov1|scaffold_122267 (3694-3592) | |
| 39-147, gnl|echTel1|scaffold_156680 (6659-6830) | |
| 39-147, gnl|echTel1|scaffold_156680 (6760-6669) | |
| 39-147, gnl|hg17|chr13 (89441591-89441706) | |
| 39-147, gnl|hg17|chr17 (30929513-30929752) | |
| 39-147, gnl|Hg17|chr17 (30929697-30929589) | |
| 39-147, gnl|loxAfr1|scaffold_43989 (4488-4251) | |
| 39-147, gnl|loxAfr1|scaffold_43989 (4342-4453) | |
| 39-147, gnl|mm7|chr11 (83368697-83368854) | |
| 39-147, gnl|Mm7|chr11 (83368799-83368701) | |
| 39-147, gnl|oryCun1|scaffold_44817 (240-8) | |
| 39-147, gnl|oryCun1|scaffold_44817 (103-205) | |
| 39-147, gnl|panTro1|chr14 (72398824-72398939) | |
| 39-147, gnl|panTro1|chr19 (34450731-34450970) | |
| 39-147, gnl|rheMac2|chr16 (30843450-30843691) | |
| 39-147, gnl|rheMac2|chr17 (70533712-70533827) | |
| 39-147, gnl|rn3|chr10 (71395764-71395921) | |
| 676-1308, gnl|bosTau2|chr19 (8141779-8142409) | |
| 676-1308, gnl|Hg17|chr17 (30928725-30928093) | |
| 676-1308, gnl|Mm7|chr11 (83367948-83367338) |