Ss1.1-Thy1-THY010118D05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGCTTTTGCGGCCCTGGAGCACAGCCGGGGGCTCCTGCGGCCGAGCTGCCCATGAATCG AGGTGTGGATCTGGGCGTGGCGGTCATTCTGCAGTCCAGCGATCAAACTGTCTTGTTGAC CCGAAGGACAGGCACCCTCAACGTTTTCCCCAACCTCTGGGTACCCCCAGCTGTTGGAAG GAGGGCTTCTTCGAGAGCTTTGGGAGGAGAGTGGACTACAGCTGCCCCAGGGCCAGTTCT CTTGGACCCCTCTGGGGCTTTGGGAGTCTGCCTACCCCCCTAGGCTGAGCTGGGGTCTCC CCAAATACCATCACATCATTCTCTATCTCCTTGTCATCTCCCAGGAGACACAGCAGCAGC TACAGGCCCGGATCCAACCAAACCCAAAAGAGGTGAGCGCCCTTATGTGGCTGGGACCAG ATGTAGCAGCTGCGGTGGCTGCCACAGAGGATGAGACAGAGACACCCAGTCAACTTCCCC AGGACCTACCACCTTCTGTCCTTGCAGTAGAACTCGAGGATGGAGGAGCTCGACCTCTGG CCTTGCCCACATCCACACTGCTGCGGACGACCCCAGCCACGGCAGAGAGCACAGAGAGGG TCAGCACCGGGACCAAGTTTGCCCTCAGGCTCTGGCTGCAGCATCTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGCTTTTGCGGCCCTGGAGCACAGCCGGGGGCTCCTGCGGCCGAGCTGCCCATGAATCG AGGTGTGGATCTGGGCGTGGCGGTCATTCTGCAGTCCAGCGATCAAACTGTCTTGTTGAC CCGAAGGACAGGCACCCTCAACGTTTTCCCCAACCTCTGGGTACCCCCAGCTGTTGGAAG GAGGGCTTCTTCGAGAGCTTTGGGAGGAGAGTGGACTACAGCTGCCCCAGGGCCAGTTCT CTTGGACCCCTCTGGGGCTTTGGGAGTCTGCCTACCCCCCTAGGCTGAGCTGGGGTCTCC CCAAATACCATCACATCATTCTCTATCTCCTTGTCATCTCCCAGGAGACACAGCAGCAGC TACAGGCCCGGATCCAACCAAACCCAAAAGAGGTGAGCGCCCTTATGTGGCTGGGACCAG ATGTAGCAGCTGCGGTGGCTGCCACAGAGGATGAGACAGAGACACCCAGTCAACTTCCCC AGGACCTACCACCTTCTGTCCTTGCAGTAGAACTCGAGGATGGAGGAGCTCGACCTCTGG CCTTGCCCACATCCACACTGCTGCGGACGACCCCAGCCACGGCAGAGAGCACAGAGAGGG TCAGCACCGGGACCAAGTTTGCCCTCAGGCTCTGGCTGCAGCATCTGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 421-514, + strand, RNAz p=0.922683 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 421-514, + strand, RNAz p=0.922683 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 4-173, gnl|bosTau2|chr3 (15497534-15497361) | |
| 4-173, gnl|canFam2|chr17 (61728603-61728373) | |
| 4-173, gnl|dasNov1|scaffold_79705 (315-70) | |
| 4-173, gnl|echTel1|scaffold_169178 (7989-8210) | |
| 4-173, gnl|hg17|chr1 (143077912-143078156) | |
| 4-173, gnl|Hg17|chr1 (143078083-143077913) | |
| 4-173, gnl|loxAfr1|scaffold_68241 (8036-8286) | |
| 4-173, gnl|mm7|chr3 (96581938-96582171) | |
| 4-173, gnl|Mm7|chr3 (96582109-96581939) | |
| 4-173, gnl|monDom2|scaffold_44 (2298497-2298261) | |
| 4-173, gnl|panTro1|chr1 (125543686-125543930) | |
| 4-173, gnl|rheMac2|chr1 (126052058-126051811) | |
| 4-173, gnl|rn3|chr2 (191471921-191472129) | |
| 4-173, gnl|tetNig1|chrUn_random (46960748-46960987) | |
| 4-173, gnl|xenTro1|scaffold_510 (64059-64311) | |
| 363-514, gnl|bosTau2|chr3 (15496289-15496137) | |
| 363-514, gnl|canFam2|chr17 (61729845-61729663) | |
| 363-514, gnl|dasNov1|scaffold_79705 (1508-1319) | |
| 363-514, gnl|echTel1|scaffold_169178 (6893-7085) | |
| 363-514, gnl|hg17|chr1 (143076375-143076563) | |
| 363-514, gnl|Hg17|chr1 (143076532-143076380) | |
| 363-514, gnl|loxAfr1|scaffold_68241 (6781-6968) | |
| 363-514, gnl|mm7|chr3 (96580846-96581030) | |
| 363-514, gnl|Mm7|chr3 (96580999-96580851) | |
| 363-514, gnl|monDom2|scaffold_44 (2299581-2299395) | |
| 363-514, gnl|panTro1|chr1 (125542110-125542298) | |
| 363-514, gnl|rheMac2|chr1 (126053643-126053455) | |
| 363-514, gnl|rn3|chr2 (191470850-191471031) | |
| 363-514, gnl|xenTro1|scaffold_510 (63076-63262) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-173, gnl|bosTau2|chr3 (15497534-15497361) | |
| 4-173, gnl|canFam2|chr17 (61728603-61728373) | |
| 4-173, gnl|dasNov1|scaffold_79705 (315-70) | |
| 4-173, gnl|echTel1|scaffold_169178 (7989-8210) | |
| 4-173, gnl|hg17|chr1 (143077912-143078156) | |
| 4-173, gnl|Hg17|chr1 (143078083-143077913) | |
| 4-173, gnl|loxAfr1|scaffold_68241 (8036-8286) | |
| 4-173, gnl|mm7|chr3 (96581938-96582171) | |
| 4-173, gnl|Mm7|chr3 (96582109-96581939) | |
| 4-173, gnl|monDom2|scaffold_44 (2298497-2298261) | |
| 4-173, gnl|panTro1|chr1 (125543686-125543930) | |
| 4-173, gnl|rheMac2|chr1 (126052058-126051811) | |
| 4-173, gnl|rn3|chr2 (191471921-191472129) | |
| 4-173, gnl|tetNig1|chrUn_random (46960748-46960987) | |
| 4-173, gnl|xenTro1|scaffold_510 (64059-64311) | |
| 363-514, gnl|bosTau2|chr3 (15496289-15496137) | |
| 363-514, gnl|canFam2|chr17 (61729845-61729663) | |
| 363-514, gnl|dasNov1|scaffold_79705 (1508-1319) | |
| 363-514, gnl|echTel1|scaffold_169178 (6893-7085) | |
| 363-514, gnl|hg17|chr1 (143076375-143076563) | |
| 363-514, gnl|Hg17|chr1 (143076532-143076380) | |
| 363-514, gnl|loxAfr1|scaffold_68241 (6781-6968) | |
| 363-514, gnl|mm7|chr3 (96580846-96581030) | |
| 363-514, gnl|Mm7|chr3 (96580999-96580851) | |
| 363-514, gnl|monDom2|scaffold_44 (2299581-2299395) | |
| 363-514, gnl|panTro1|chr1 (125542110-125542298) | |
| 363-514, gnl|rheMac2|chr1 (126053643-126053455) | |
| 363-514, gnl|rn3|chr2 (191470850-191471031) | |
| 363-514, gnl|xenTro1|scaffold_510 (63076-63262) |