Ss1.1-Thy1-THY010203B06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTATAAACAAGGCATCCGACTGGTTGGGCGGATTTTTCTTTTCCTTCTTCCCGCGCGCT TTCGCTCCCAGTCCTTTGGTTGCGTTGTGGGCGCGCGGCACACAGCCGGGAGGCCGAGGA CCCGGGGCCGTCTGCAGACGTACAGGAAGAATGTGCAGCAGATGATGCAGTGTCTGATCC GCAAGCTCGCCGCGCTCAGCCAGTACGAGGAGATCCTGGCAAAAATCAGCTCCACGTCTA CAGATCGGCTCACGGTCCTCAAGGCCAAGCCACAGTCCATACAGAGGGGCGTCCTCACCA TCTGCAGTGACCCCTACACGCTGGCCCAGCAGCTGACTCACATAGAGCTGGAGAGGCTGA ATTATATTGGCCCAGAAGAATTCGTTCAGGCGTTTGTGCAGAAGGACCCTTTGGACAATG ACAAGAGTTGCTACAGTGAACGGAAGAAAACACGCAGCTTGGAGGCTTACGTGGAGTGGT TTAACCGCCTCAGCTACTTGGTTGCCACGGAAATCTGCATGCCTGTAAAGAAGAAGCACC GAGCAAGGATGATCGAGTATTTCATTGACGTGGCTCGGGAGTGTTTCAACATCGGCAACT TTAATTCCTTGATGGCAATAATCTCTGGCATGAATATGAGCCCCGTCTCTCGACTGAAGA AAACTTGGGCCAAGGTGAAGACGGCCAAGTTCGACGTTCTTGAGCATCAGATGGACCCTT CGAGCAACTTCTACAATTACCGAACAGCTCTGCGTGGGGCAGCACAAAGGTCTTTAACCG CTCATAGCAGCAGGGAAAAGATTGTGATACCATTCTTCAGTCTTTTAATCAAAGATATTT ATTTCCTCTTCCTCCGAGGTTTTGAGTTGGCTGCTGGTTAGCAAACTCCTTTTTACCCAT ATAAGTTATTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTATAAACAAGGCATCCGACTGGTTGGGCGGATTTTTCTTTTCCTTCTTCCCGCGCGCT TTCGCTCCCAGTCCTTTGGTTGCGTTGTGGGCGCGCGGCACACAGCCGGGAGGCCGAGGA CCCGGGGCCGTCTGCAGACGTACAGGAAGAATGTGCAGCAGATGATGCAGTGTCTGATCC GCAAGCTCGCCGCGCTCAGCCAGTACGAGGAGATCCTGGCAAAAATCAGCTCCACGTCTA CAGATCGGCTCACGGTCCTCAAGGCCAAGCCACAGTCCATACAGAGGGGCGTCCTCACCA TCTGCAGTGACCCCTACACGCTGGCCCAGCAGCTGACTCACATAGAGCTGGAGAGGCTGA ATTATATTGGCCCAGAAGAATTCGTTCAGGCGTTTGTGCAGAAGGACCCTTTGGACAATG ACAAGAGTTGCTACAGTGAACGGAAGAAAACACGCAGCTTGGAGGCTTACGTGGAGTGGT TTAACCGCCTCAGCTACTTGGTTGCCACGGAAATCTGCATGCCTGTAAAGAAGAAGCACC GAGCAAGGATGATCGAGTATTTCATTGACGTGGCTCGGGAGTGTTTCAACATCGGCAACT TTAATTCCTTGATGGCAATAATCTCTGGCATGAATATGAGCCCCGTCTCTCGACTGAAGA AAACTTGGGCCAAGGTGAAGACGGCCAAGTTCGACGTTCTTGAGCATCAGATGGACCCTT CGAGCAACTTCTACAATTACCGAACAGCTCTGCGTGGGGCAGCACAAAGGTCTTTAACCG CTCATAGCAGCAGGGAAAAGATTGTGATACCATTCTTCAGTCTTTTAATCAAAGATATTT ATTTCCTCTTCCTCCGAGGTTTTGAGTTGGCTGCTGGTTAGCAAACTCCTTTTTACCCAT ATAAGTTATTTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 71 entry(ies) | More info |
| Aligned organism(s): 71 entry(ies) | Help | Less info |
| 134-357, gnl|bosTau2|chr6 (54563310-54563087) | |
| 134-357, gnl|canFam2|chr32 (8525501-8525755) | |
| 134-357, gnl|danRer3|chr5 (35262442-35262698) | |
| 134-357, gnl|dasNov1|scaffold_6859 (29291-29544) | |
| 134-357, gnl|echTel1|scaffold_287634 (23691-23446) | |
| 134-357, gnl|fr1|chrUn (155047236-155046981) | |
| 134-357, gnl|galGal2|chr4 (46180005-46179763) | |
| 134-357, gnl|hg17|chr4 (82726389-82726643) | |
| 134-357, gnl|Hg17|chr4 (82726618-82726395) | |
| 134-357, gnl|loxAfr1|scaffold_7342 (22306-22538) | |
| 134-357, gnl|mm7|chr5 (98449245-98449498) | |
| 134-357, gnl|Mm7|chr5 (98449473-98449251) | |
| 134-357, gnl|monDom2|scaffold_132 (1889459-1889202) | |
| 134-357, gnl|oryCun1|scaffold_172068 (32261-32048) | |
| 134-357, gnl|panTro1|chr3 (51000016-50999762) | |
| 134-357, gnl|rheMac2|chr5 (48121146-48120892) | |
| 134-357, gnl|rn3|chr14 (11676971-11676718) | |
| 134-357, gnl|tetNig1|chr12 (9649312-9649064) | |
| 134-357, gnl|xenTro1|scaffold_867 (277013-277252) | |
| 525-627, gnl|bosTau2|chr28 (8734560-8734662) | |
| 525-627, gnl|canFam2|chr11 (4562636-4562506) | |
| 525-627, gnl|canFam2|chr28 (6862455-6862296) | |
| 525-627, gnl|danRer3|chr5 (35259765-35259890) | |
| 525-627, gnl|danRer3|chr5 (35259776-35259904) | |
| 525-627, gnl|dasNov1|scaffold_135219 (1572-1470) | |
| 525-627, gnl|dasNov1|scaffold_6859 (27074-27185) | |
| 525-627, gnl|echTel1|scaffold_198414 (1909-2038) | |
| 525-627, gnl|echTel1|scaffold_287634 (25307-25178) | |
| 525-627, gnl|fr1|chrUn (192677177-192677042) | |
| 525-627, gnl|fr1|chrUn (192677167-192677048) | |
| 525-627, gnl|galGal2|chr6 (4185448-4185333) | |
| 525-627, gnl|hg17|chr10 (43014529-43014696) | |
| 525-627, gnl|Hg17|chr10 (43014645-43014543) | |
| 525-627, gnl|hg17|chr5 (179478946-179479076) | |
| 525-627, gnl|loxAfr1|scaffold_28915 (43068-43196) | |
| 525-627, gnl|loxAfr1|scaffold_28915 (43068-43199) | |
| 525-627, gnl|mm7|chr11 (49926363-49926233) | |
| 525-627, gnl|mm7|chr6 (118112607-118112451) | |
| 525-627, gnl|Mm7|chr6 (118112491-118112593) | |
| 525-627, gnl|monDom2|scaffold_14 (10328794-10328949) | |
| 525-627, gnl|monDom2|scaffold_6 (16143715-16143598) | |
| 525-627, gnl|oryCun1|scaffold_146808 (9192-9033) | |
| 525-627, gnl|oryCun1|scaffold_172068 (37294-37163) | |
| 525-627, gnl|panTro1|chr4 (187023343-187023473) | |
| 525-627, gnl|panTro1|chr8 (43648773-43648940) | |
| 525-627, gnl|rheMac2|chr6 (176812083-176812213) | |
| 525-627, gnl|rheMac2|chr9 (43346159-43346325) | |
| 525-627, gnl|rn3|chr10 (35461383-35461253) | |
| 525-627, gnl|rn3|chr4 (154630514-154630358) | |
| 525-627, gnl|tetNig1|chr1 (825120-825000) | |
| 525-627, gnl|tetNig1|chr4 (704491-704623) | |
| 525-627, gnl|xenTro1|scaffold_40 (2431927-2431813) | |
| 698-806, gnl|bosTau2|chr6 (54558712-54558603) | |
| 698-806, gnl|canFam2|chr32 (8520696-8520832) | |
| 698-806, gnl|danRer3|chr5 (35255372-35255499) | |
| 698-806, gnl|dasNov1|scaffold_6859 (24649-24789) | |
| 698-806, gnl|echTel1|scaffold_191954 (8103-7969) | |
| 698-806, gnl|fr1|chrUn (155050018-155049884) | |
| 698-806, gnl|galGal2|chr4 (46184354-46184219) | |
| 698-806, gnl|hg17|chr4 (82719148-82719287) | |
| 698-806, gnl|Hg17|chr4 (82719269-82719160) | |
| 698-806, gnl|loxAfr1|scaffold_7342 (14818-14956) | |
| 698-806, gnl|mm7|chr5 (98442754-98442884) | |
| 698-806, gnl|Mm7|chr5 (98442870-98442767) | |
| 698-806, gnl|monDom2|scaffold_132 (1897787-1897645) | |
| 698-806, gnl|oryCun1|scaffold_193279 (4055-4190) | |
| 698-806, gnl|panTro1|chr3 (51007274-51007135) | |
| 698-806, gnl|rheMac2|chr5 (48128721-48128587) | |
| 698-806, gnl|rn3|chr14 (11682280-11682151) | |
| 698-806, gnl|tetNig1|chr12 (9652383-9652265) | |
| 698-806, gnl|xenTro1|scaffold_867 (274688-274806) |
| Aligned organism(s): 71 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 134-357, gnl|bosTau2|chr6 (54563310-54563087) | |
| 134-357, gnl|canFam2|chr32 (8525501-8525755) | |
| 134-357, gnl|danRer3|chr5 (35262442-35262698) | |
| 134-357, gnl|dasNov1|scaffold_6859 (29291-29544) | |
| 134-357, gnl|echTel1|scaffold_287634 (23691-23446) | |
| 134-357, gnl|fr1|chrUn (155047236-155046981) | |
| 134-357, gnl|galGal2|chr4 (46180005-46179763) | |
| 134-357, gnl|hg17|chr4 (82726389-82726643) | |
| 134-357, gnl|Hg17|chr4 (82726618-82726395) | |
| 134-357, gnl|loxAfr1|scaffold_7342 (22306-22538) | |
| 134-357, gnl|mm7|chr5 (98449245-98449498) | |
| 134-357, gnl|Mm7|chr5 (98449473-98449251) | |
| 134-357, gnl|monDom2|scaffold_132 (1889459-1889202) | |
| 134-357, gnl|oryCun1|scaffold_172068 (32261-32048) | |
| 134-357, gnl|panTro1|chr3 (51000016-50999762) | |
| 134-357, gnl|rheMac2|chr5 (48121146-48120892) | |
| 134-357, gnl|rn3|chr14 (11676971-11676718) | |
| 134-357, gnl|tetNig1|chr12 (9649312-9649064) | |
| 134-357, gnl|xenTro1|scaffold_867 (277013-277252) | |
| 525-627, gnl|bosTau2|chr28 (8734560-8734662) | |
| 525-627, gnl|canFam2|chr11 (4562636-4562506) | |
| 525-627, gnl|canFam2|chr28 (6862455-6862296) | |
| 525-627, gnl|danRer3|chr5 (35259765-35259890) | |
| 525-627, gnl|danRer3|chr5 (35259776-35259904) | |
| 525-627, gnl|dasNov1|scaffold_135219 (1572-1470) | |
| 525-627, gnl|dasNov1|scaffold_6859 (27074-27185) | |
| 525-627, gnl|echTel1|scaffold_198414 (1909-2038) | |
| 525-627, gnl|echTel1|scaffold_287634 (25307-25178) | |
| 525-627, gnl|fr1|chrUn (192677177-192677042) | |
| 525-627, gnl|fr1|chrUn (192677167-192677048) | |
| 525-627, gnl|galGal2|chr6 (4185448-4185333) | |
| 525-627, gnl|hg17|chr10 (43014529-43014696) | |
| 525-627, gnl|Hg17|chr10 (43014645-43014543) | |
| 525-627, gnl|hg17|chr5 (179478946-179479076) | |
| 525-627, gnl|loxAfr1|scaffold_28915 (43068-43196) | |
| 525-627, gnl|loxAfr1|scaffold_28915 (43068-43199) | |
| 525-627, gnl|mm7|chr11 (49926363-49926233) | |
| 525-627, gnl|mm7|chr6 (118112607-118112451) | |
| 525-627, gnl|Mm7|chr6 (118112491-118112593) | |
| 525-627, gnl|monDom2|scaffold_14 (10328794-10328949) | |
| 525-627, gnl|monDom2|scaffold_6 (16143715-16143598) | |
| 525-627, gnl|oryCun1|scaffold_146808 (9192-9033) | |
| 525-627, gnl|oryCun1|scaffold_172068 (37294-37163) | |
| 525-627, gnl|panTro1|chr4 (187023343-187023473) | |
| 525-627, gnl|panTro1|chr8 (43648773-43648940) | |
| 525-627, gnl|rheMac2|chr6 (176812083-176812213) | |
| 525-627, gnl|rheMac2|chr9 (43346159-43346325) | |
| 525-627, gnl|rn3|chr10 (35461383-35461253) | |
| 525-627, gnl|rn3|chr4 (154630514-154630358) | |
| 525-627, gnl|tetNig1|chr1 (825120-825000) | |
| 525-627, gnl|tetNig1|chr4 (704491-704623) | |
| 525-627, gnl|xenTro1|scaffold_40 (2431927-2431813) | |
| 698-806, gnl|bosTau2|chr6 (54558712-54558603) | |
| 698-806, gnl|canFam2|chr32 (8520696-8520832) | |
| 698-806, gnl|danRer3|chr5 (35255372-35255499) | |
| 698-806, gnl|dasNov1|scaffold_6859 (24649-24789) | |
| 698-806, gnl|echTel1|scaffold_191954 (8103-7969) | |
| 698-806, gnl|fr1|chrUn (155050018-155049884) | |
| 698-806, gnl|galGal2|chr4 (46184354-46184219) | |
| 698-806, gnl|hg17|chr4 (82719148-82719287) | |
| 698-806, gnl|Hg17|chr4 (82719269-82719160) | |
| 698-806, gnl|loxAfr1|scaffold_7342 (14818-14956) | |
| 698-806, gnl|mm7|chr5 (98442754-98442884) | |
| 698-806, gnl|Mm7|chr5 (98442870-98442767) | |
| 698-806, gnl|monDom2|scaffold_132 (1897787-1897645) | |
| 698-806, gnl|oryCun1|scaffold_193279 (4055-4190) | |
| 698-806, gnl|panTro1|chr3 (51007274-51007135) | |
| 698-806, gnl|rheMac2|chr5 (48128721-48128587) | |
| 698-806, gnl|rn3|chr14 (11682280-11682151) | |
| 698-806, gnl|tetNig1|chr12 (9652383-9652265) | |
| 698-806, gnl|xenTro1|scaffold_867 (274688-274806) |