Ss1.1-Thy1-THY010206D03.5
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AACGAACGGTCGCGGCGGCGACAGCTACCGCTTCGGAGGAAGCGGCTGTGGAGAAGGAAG
AAGGGAAGCTGGACGGGGCGGGAGTCAAAACCGGGACCCTCGTCATGGGTCCGCGAACCT
AGAGCGGCGGAAGGTACCGGCCGGGAGCCGAGCTGGCCGCCGTTCCTTCCTGTGGCCCCC
ATGGCTGAGGACTGGCTGGACTGCCCGGCCCTGGGCCCTGGCTGGAAGCGCCGTGAGGTC
TTTCGAAAGTCAGGTGCCACCTGCGGACGCTCAGACACCTATTACCAGAGCCCCACAGGA
GACAGGATCCGAAGCAAAGTTGAGCTCACCCGATACCTGGGCCCTGCGTGTGACCTCTCC
CTCTTTGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCTAAGGCCCATTCCTTGGCT
GTCCCCAGCAGGAAGCGGAAGAAGCCTTCAAAGCCAGCCAAGGCTCGGAAACGTCAGGTT
GGCCCCCAAAAGAGTGAGGTCAGGAAGGAGACCCCAAGGGATGAGACCAAGGCTGACGCT
AACCCAGCCCCAGCTTCACTTCCTGCACCTGGGTGAGTGTTGGTCTAGTGAGCCAAATCC
ATGAGGGTCGTGTTTGGGGGTACATTCAGGGCCCCACACCCATGTCTTCCATCCCAGGTG
CTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATGGTACCCGAAGGCAGAGGCTCAAGAC
TTTGTGCAAGGACTGCCGAGCACAGAGAATTGCTTTNCACCGGGAGCAGAGGATGTTTAA
GCGTGTGGGGCTGTGGGGAGTGCACAGCCTGCCAGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AACGAACGGTCGCGGCGGCGACAGCTACCGCTTCGGAGGAAGCGGCTGTGGAGAAGGAAG
AAGGGAAGCTGGACGGGGCGGGAGTCAAAACCGGGACCCTCGTCATGGGTCCGCGAACCT
AGAGCGGCGGAAGGTACCGGCCGGGAGCCGAGCTGGCCGCCGTTCCTTCCTGTGGCCCCC
ATGGCTGAGGACTGGCTGGACTGCCCGGCCCTGGGCCCTGGCTGGAAGCGCCGTGAGGTC
TTTCGAAAGTCAGGTGCCACCTGCGGACGCTCAGACACCTATTACCAGAGCCCCACAGGA
GACAGGATCCGAAGCAAAGTTGAGCTCACCCGATACCTGGGCCCTGCGTGTGACCTCTCC
CTCTTTGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCTAAGGCCCATTCCTTGGCT
GTCCCCAGCAGGAAGCGGAAGAAGCCTTCAAAGCCAGCCAAGGCTCGGAAACGTCAGGTT
GGCCCCCAAAAGAGTGAGGTCAGGAAGGAGACCCCAAGGGATGAGACCAAGGCTGACGCT
AACCCAGCCCCAGCTTCACTTCCTGCACCTGGGTGAGTGTTGGTCTAGTGAGCCAAATCC
ATGAGGGTCGTGTTTGGGGGTACATTCAGGGCCCCACACCCATGTCTTCCATCCCAGGTG
CTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATGGTACCCGAAGGCAGAGGCTCAAGAC
TTTGTGCAAGGACTGCCGAGCACAGAGAATTGCTTTNCACCGGGAGCAGAGGATGTTTAA
GCGTGTGGGGCTGTGGGGAGTGCACAGCCTGCCAGG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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36-293, gnl|bosTau2|chrX (42166499-42166755) |
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36-293, gnl|Mm7|chr18 (74662649-74663874) |
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152-290, gnl|bosTau2|chr24 (37173598-37173735) |
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152-290, gnl|canFam2|chr7 (81648515-81648379) |
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152-290, gnl|dasNov1|scaffold_12451 (5561-5425) |
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152-290, gnl|fr1|chrUn (4189775-4189629) |
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152-290, gnl|hg17|chr18 (46060249-46060385) |
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152-290, gnl|Hg17|chr18 (46060389-46060251) |
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152-290, gnl|mm7|chr18 (74663878-74663741) |
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152-290, gnl|Mm7|chr18 (74663735-74663874) |
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152-290, gnl|monDom2|scaffold_134 (449333-449454) |
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152-290, gnl|oryCun1|scaffold_203777 (66029-65893) |
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152-290, gnl|panTro1|chr17 (42641639-42641775) |
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152-290, gnl|rheMac2|chr18 (43358190-43358326) |
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152-290, gnl|rn3|chr18 (71142797-71142671) |
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152-290, gnl|xenTro1|scaffold_1518 (120210-120339) |
| |
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404-740, gnl|bosTau2|chr24 (37180351-37180685) |
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404-740, gnl|Hg17|chr18 (46057368-46057030) |
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404-740, gnl|Mm7|chr18 (74667747-74668153) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
36-293, gnl|bosTau2|chrX (42166499-42166755) |
|
36-293, gnl|Mm7|chr18 (74662649-74663874) |
| |
|
152-290, gnl|bosTau2|chr24 (37173598-37173735) |
|
152-290, gnl|canFam2|chr7 (81648515-81648379) |
|
152-290, gnl|dasNov1|scaffold_12451 (5561-5425) |
|
152-290, gnl|fr1|chrUn (4189775-4189629) |
|
152-290, gnl|hg17|chr18 (46060249-46060385) |
|
152-290, gnl|Hg17|chr18 (46060389-46060251) |
|
152-290, gnl|mm7|chr18 (74663878-74663741) |
|
152-290, gnl|Mm7|chr18 (74663735-74663874) |
|
152-290, gnl|monDom2|scaffold_134 (449333-449454) |
|
152-290, gnl|oryCun1|scaffold_203777 (66029-65893) |
|
152-290, gnl|panTro1|chr17 (42641639-42641775) |
|
152-290, gnl|rheMac2|chr18 (43358190-43358326) |
|
152-290, gnl|rn3|chr18 (71142797-71142671) |
|
152-290, gnl|xenTro1|scaffold_1518 (120210-120339) |
| |
|
404-740, gnl|bosTau2|chr24 (37180351-37180685) |
|
404-740, gnl|Hg17|chr18 (46057368-46057030) |
|
404-740, gnl|Mm7|chr18 (74667747-74668153) |
