Non-Coding RNA Search

Ss1.1-Tra1-TCH01A020093.5

Sequence:


               
               ATTTAAATCTGT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GAGAAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAA
GAAAGAAAGAAAATCTGTACTCATACAAATGTGTTTACTTTATAAAAATCACAAAAGTAA
AGCTGTTTCAGTGATCAGGACAACCAGTTGCTCTAAGAGTACCTGGTGCTTGCTGTGTGA
TGATGGGACAGAGAAAAGGTATGACCAAGCGCCAGCTGCCAAACCGGCACCTTCTCACAC
ATGGTGTGAGAATTCTTTTTTTGCTGAGCCAGCATTGTTATTGACAATGAAGATAAAGGG
CCTGGTGAGGATGTTTCTCTGGCCTTTTTGAGTTACAGAGTATTTCCCTATGCACTGTTT
CACGTGACCCTCACAACGAACCAGGGTGGCAGAATGTTCCCACTTTGTCAATGTGGAAAT
CAGGATTCAGAGGANATGAATTTGCCTGAGGTCCATTGCTAATGTGCGACATAGACTCAA
ACTCAAGTCCAGTATTCTTTTCCTCCCTTTCCTGTTGTTTTGGGGGGTTTGTTTTTTTGT
TGGTTATGTTGTTCTTTTTTGGTCACCCCACAGCATACGGAGTTCCTG------------
------------------------------------------------------------
------------------------------------------------GAGCTGCCACTA
ATCCCCTTGTGCCTCAACAGGAACTCCTCCCCTCTTGTTCTTGTACTTAGAAAGCCCCAT
ATGGTGTACTGGTTTGTGTTTACTGTGGACACGGGGAAGTCCTTGCTGCTCATGGTGGCG
TGCCTTTCCTTCCAGGTGGCACAGCAGCACGAATGAGAAACCAGAAACCGACAACTGGGA
CGCGTGGGCAGCCCAACCCTCCCTCACCGTCCCTAGCGCCGGGCAGTTAAGGCAGAGATC
GGCCTTCACTCCAGCCACGGCCACCGGCTCCTCTCCATCTCCTGTCTTAGGCCAGGGTGA
AAAGGTGGAGGGGCTCCAAGCCCAAGCCCTGTATCCTTGGAGAGCCAAAAAGGACAACCA
TTTAAATTTTAACAAAAATGATGTCATCACCGTCTTGGAGCAGCAGGACATGTGGTGGTT
TGGAGAAGTTCAAGGCCAGAAGGGTTGGTTCCCTAAGTCCTACGTGAAACTCATTTCAGG
GCCCATAAGGAAATCTACCAGCATAGATTCCGGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTAAATCTGT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GAGAAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAA
GAAAGAAAGAAAATCTGTACTCATACAAATGTGTTTACTTTATAAAAATCACAAAAGTAA
AGCTGTTTCAGTGATCAGGACAACCAGTTGCTCTAAGAGTACCTGGTGCTTGCTGTGTGA
TGATGGGACAGAGAAAAGGTATGACCAAGCGCCAGCTGCCAAACCGGCACCTTCTCACAC
ATGGTGTGAGAATTCTTTTTTTGCTGAGCCAGCATTGTTATTGACAATGAAGATAAAGGG
CCTGGTGAGGATGTTTCTCTGGCCTTTTTGAGTTACAGAGTATTTCCCTATGCACTGTTT
CACGTGACCCTCACAACGAACCAGGGTGGCAGAATGTTCCCACTTTGTCAATGTGGAAAT
CAGGATTCAGAGGANATGAATTTGCCTGAGGTCCATTGCTAATGTGCGACATAGACTCAA
ACTCAAGTCCAGTATTCTTTTCCTCCCTTTCCTGTTGTTTTGGGGGGTTTGTTTTTTTGT
TGGTTATGTTGTTCTTTTTTGGTCACCCCACAGCATACGGAGTTCCTG------------
------------------------------------------------------------
------------------------------------------------GAGCTGCCACTA
ATCCCCTTGTGCCTCAACAGGAACTCCTCCCCTCTTGTTCTTGTACTTAGAAAGCCCCAT
ATGGTGTACTGGTTTGTGTTTACTGTGGACACGGGGAAGTCCTTGCTGCTCATGGTGGCG
TGCCTTTCCTTCCAGGTGGCACAGCAGCACGAATGAGAAACCAGAAACCGACAACTGGGA
CGCGTGGGCAGCCCAACCCTCCCTCACCGTCCCTAGCGCCGGGCAGTTAAGGCAGAGATC
GGCCTTCACTCCAGCCACGGCCACCGGCTCCTCTCCATCTCCTGTCTTAGGCCAGGGTGA
AAAGGTGGAGGGGCTCCAAGCCCAAGCCCTGTATCCTTGGAGAGCCAAAAAGGACAACCA
TTTAAATTTTAACAAAAATGATGTCATCACCGTCTTGGAGCAGCAGGACATGTGGTGGTT
TGGAGAAGTTCAAGGCCAGAAGGGTTGGTTCCCTAAGTCCTACGTGAAACTCATTTCAGG
GCCCATAAGGAAATCTACCAGCATAGATTCCGGCTC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               154-505, gnl|bosTau2|chr1 (1606529-1606887)
               


               
               683-884, gnl|bosTau2|chr1 (1606944-1607144)
               

               
               683-884, gnl|Hg17|chr21 (34108046-34108247)
               

               
               683-884, gnl|Mm7|chr16 (91901112-91901312)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               154-505, gnl|bosTau2|chr1 (1606529-1606887)
               


               
               683-884, gnl|bosTau2|chr1 (1606944-1607144)
               

               
               683-884, gnl|Hg17|chr21 (34108046-34108247)
               

               
               683-884, gnl|Mm7|chr16 (91901112-91901312)

	154-505, gnl\|bosTau2\|chr1 (1606529-1606887)

	683-884, gnl\|bosTau2\|chr1 (1606944-1607144)
	683-884, gnl\|Hg17\|chr21 (34108046-34108247)
	683-884, gnl\|Mm7\|chr16 (91901112-91901312)