Ss1.1-Tra1-TCH01A040081.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTCTTGTCCCAGTTGCTGCTGCTGTTAAAAATGAAGTAAATGTTCCCTGCCTCAGAAA CTTTGTCGAAAGCCTTTACGATACCACGCTGGAACTCTCTTCTCGAAAGAAGCATTCCTT GGCCTTGTACCCCCTGGTGACCTGTCTGCTCTGCGTCAGCCAGAAGCAGCTGTTCCTGAA CAGGTGGCACGTTTTCCTCAACAACTGCTTATCCAACCTTAAAAATAAAGACCCCAAGAT GGCGCGAGTGGCACTGGAGTCTCTGTACAGATTACTTTGGGTTTACATGATTCGAATTAA ATGTGAAAGCAACACGGCGACTCAGAGCCGTCTTATAACCATCATCACAACACTTTTCCC CAAAGGGTCCCGTGGTGTGGTGCCAAGGGATATGCCCCTGAACATCTTCGTGAAAATCAT CCAGTTCATCGCCCAGGAGCGTTTAGATTTTGCAATGAAAGAAATCATTTTTGATTTTCT TTGTGTGGGAAAACCAGCCAAAGCTTTCAGTCTCAATCCAGAGAGAATGAACATTGGTTT ACGGGCCTTCCTGGTCATAGCGGACAGCTTGCAGCAGAAGGATGGCGAGCCTCCGATGCC AGTCACGGGAGCTGTTCTCCCTTCAGGAAACACACTGAGAGTGAAGAAAACCTACCTGAG TAAAACACTGACGGAAGAGGAAGCCAAAATGATAGGCGTGTCATTATATTACTCTCAAGT ACGAAAAGCTGTGGACAACATTTTGAGGCACCTTGATAAAGAAGTGGGAAGGTGTATGAT GCTAACGAATGTCCAGATGTTAAACAAAGAACCCGAGGACATGATCACGGGTGAGAGAAA GCCGAAAATAGATCTTTTCAGGACCTGCGTTGCTGCTATTCCTCGTCTGCTTCCCGATGG GATGTCAAAACTTGAACTTATTGACTTGCTGGCAAGGCTCTCGATTCACATGGACGATGA ACTGCGACATATTGCACAGAACTCTCTTCAGGGTCTGCTGGTGGACTTCTCGGACTGGCG GGAAGATGTCCTGTTTGGCTTTACCAACTTCCTGCTCCGGGAAGTAAATGACATGCACCA CACACTCCTCGATTCATCCCTCAAGTTACTGCTCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTCTTGTCCCAGTTGCTGCTGCTGTTAAAAATGAAGTAAATGTTCCCTGCCTCAGAAA CTTTGTCGAAAGCCTTTACGATACCACGCTGGAACTCTCTTCTCGAAAGAAGCATTCCTT GGCCTTGTACCCCCTGGTGACCTGTCTGCTCTGCGTCAGCCAGAAGCAGCTGTTCCTGAA CAGGTGGCACGTTTTCCTCAACAACTGCTTATCCAACCTTAAAAATAAAGACCCCAAGAT GGCGCGAGTGGCACTGGAGTCTCTGTACAGATTACTTTGGGTTTACATGATTCGAATTAA ATGTGAAAGCAACACGGCGACTCAGAGCCGTCTTATAACCATCATCACAACACTTTTCCC CAAAGGGTCCCGTGGTGTGGTGCCAAGGGATATGCCCCTGAACATCTTCGTGAAAATCAT CCAGTTCATCGCCCAGGAGCGTTTAGATTTTGCAATGAAAGAAATCATTTTTGATTTTCT TTGTGTGGGAAAACCAGCCAAAGCTTTCAGTCTCAATCCAGAGAGAATGAACATTGGTTT ACGGGCCTTCCTGGTCATAGCGGACAGCTTGCAGCAGAAGGATGGCGAGCCTCCGATGCC AGTCACGGGAGCTGTTCTCCCTTCAGGAAACACACTGAGAGTGAAGAAAACCTACCTGAG TAAAACACTGACGGAAGAGGAAGCCAAAATGATAGGCGTGTCATTATATTACTCTCAAGT ACGAAAAGCTGTGGACAACATTTTGAGGCACCTTGATAAAGAAGTGGGAAGGTGTATGAT GCTAACGAATGTCCAGATGTTAAACAAAGAACCCGAGGACATGATCACGGGTGAGAGAAA GCCGAAAATAGATCTTTTCAGGACCTGCGTTGCTGCTATTCCTCGTCTGCTTCCCGATGG GATGTCAAAACTTGAACTTATTGACTTGCTGGCAAGGCTCTCGATTCACATGGACGATGA ACTGCGACATATTGCACAGAACTCTCTTCAGGGTCTGCTGGTGGACTTCTCGGACTGGCG GGAAGATGTCCTGTTTGGCTTTACCAACTTCCTGCTCCGGGAAGTAAATGACATGCACCA CACACTCCTCGATTCATCCCTCAAGTTACTGCTCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
| 121-223, gnl|bosTau2|chr12 (16110070-16109968) | |
| 121-223, gnl|canFam2|chr25 (10982034-10981903) | |
| 121-223, gnl|danRer3|chr15 (1240095-1239980) | |
| 121-223, gnl|dasNov1|scaffold_5403 (120215-120345) | |
| 121-223, gnl|echTel1|scaffold_178986 (7751-7879) | |
| 121-223, gnl|fr1|chrUn (56860182-56860300) | |
| 121-223, gnl|galGal2|chr1 (166741739-166741608) | |
| 121-223, gnl|hg17|chr13 (31608989-31609120) | |
| 121-223, gnl|Hg17|chr13 (31609007-31609109) | |
| 121-223, gnl|loxAfr1|scaffold_85773 (7926-8057) | |
| 121-223, gnl|mm7|chr5 (149294259-149294390) | |
| 121-223, gnl|Mm7|chr5 (149294277-149294379) | |
| 121-223, gnl|monDom2|scaffold_15 (42563342-42563470) | |
| 121-223, gnl|oryCun1|scaffold_215408 (166425-166294) | |
| 121-223, gnl|panTro1|chr14 (30803967-30804098) | |
| 121-223, gnl|rheMac2|chr17 (11505284-11505415) | |
| 121-223, gnl|rn3|chr12 (5024156-5024025) | |
| 121-223, gnl|tetNig1|chr7 (2433185-2433315) | |
| 121-223, gnl|xenTro1|scaffold_384 (1182842-1182712) | |
| 326-437, gnl|bosTau2|chr12 (16099599-16099488) | |
| 326-437, gnl|canFam2|chr25 (10964114-10964030) | |
| 326-437, gnl|danRer3|chr15 (1235113-1235029) | |
| 326-437, gnl|dasNov1|scaffold_24525 (3636-3552) | |
| 326-437, gnl|echTel1|scaffold_309306 (59366-59285) | |
| 326-437, gnl|fr1|chrUn (260731849-260731768) | |
| 326-437, gnl|galGal2|chr1 (166740016-166739932) | |
| 326-437, gnl|hg17|chr13 (31619966-31620050) | |
| 326-437, gnl|Hg17|chr13 (31619974-31620085) | |
| 326-437, gnl|loxAfr1|scaffold_981 (1666-1750) | |
| 326-437, gnl|mm7|chr5 (149303280-149303364) | |
| 326-437, gnl|Mm7|chr5 (149303288-149303399) | |
| 326-437, gnl|monDom2|scaffold_15 (42575006-42575090) | |
| 326-437, gnl|oryCun1|scaffold_215408 (154997-154913) | |
| 326-437, gnl|panTro1|chr14 (30814924-30815008) | |
| 326-437, gnl|rheMac2|chr17 (11516126-11516210) | |
| 326-437, gnl|rn3|chr12 (5018441-5018357) | |
| 326-437, gnl|tetNig1|chr7 (2433741-2433822) | |
| 326-437, gnl|xenTro1|scaffold_384 (1181506-1181422) | |
| 522-701, gnl|bosTau2|chr12 (16092968-16092789) | |
| 522-701, gnl|canFam2|chr25 (10955577-10955387) | |
| 522-701, gnl|danRer3|chr15 (1234534-1234353) | |
| 522-701, gnl|dasNov1|scaffold_91954 (6371-6183) | |
| 522-701, gnl|echTel1|scaffold_285727 (3896-4082) | |
| 522-701, gnl|fr1|chrUn (56861294-56861486) | |
| 522-701, gnl|galGal2|chr1 (166736403-166736213) | |
| 522-701, gnl|hg17|chr13 (31627623-31627813) | |
| 522-701, gnl|Hg17|chr13 (31627626-31627805) | |
| 522-701, gnl|loxAfr1|scaffold_981 (11794-11971) | |
| 522-701, gnl|mm7|chr5 (149311967-149312149) | |
| 522-701, gnl|Mm7|chr5 (149311970-149312148) | |
| 522-701, gnl|monDom2|scaffold_15 (42585291-42585481) | |
| 522-701, gnl|oryCun1|scaffold_214616 (83286-83479) | |
| 522-701, gnl|panTro1|chr14 (30822666-30822856) | |
| 522-701, gnl|rheMac2|chr17 (11524071-11524260) | |
| 522-701, gnl|rn3|chr12 (5011569-5011387) | |
| 522-701, gnl|tetNig1|chr7 (2434485-2434672) | |
| 522-701, gnl|xenTro1|scaffold_384 (1179944-1179757) | |
| 935-1116, gnl|bosTau2|chr12 (16076055-16075874) | |
| 935-1116, gnl|Hg17|chr13 (31643147-31643328) | |
| 935-1116, gnl|Mm7|chr5 (149319146-149319327) |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 121-223, gnl|bosTau2|chr12 (16110070-16109968) | |
| 121-223, gnl|canFam2|chr25 (10982034-10981903) | |
| 121-223, gnl|danRer3|chr15 (1240095-1239980) | |
| 121-223, gnl|dasNov1|scaffold_5403 (120215-120345) | |
| 121-223, gnl|echTel1|scaffold_178986 (7751-7879) | |
| 121-223, gnl|fr1|chrUn (56860182-56860300) | |
| 121-223, gnl|galGal2|chr1 (166741739-166741608) | |
| 121-223, gnl|hg17|chr13 (31608989-31609120) | |
| 121-223, gnl|Hg17|chr13 (31609007-31609109) | |
| 121-223, gnl|loxAfr1|scaffold_85773 (7926-8057) | |
| 121-223, gnl|mm7|chr5 (149294259-149294390) | |
| 121-223, gnl|Mm7|chr5 (149294277-149294379) | |
| 121-223, gnl|monDom2|scaffold_15 (42563342-42563470) | |
| 121-223, gnl|oryCun1|scaffold_215408 (166425-166294) | |
| 121-223, gnl|panTro1|chr14 (30803967-30804098) | |
| 121-223, gnl|rheMac2|chr17 (11505284-11505415) | |
| 121-223, gnl|rn3|chr12 (5024156-5024025) | |
| 121-223, gnl|tetNig1|chr7 (2433185-2433315) | |
| 121-223, gnl|xenTro1|scaffold_384 (1182842-1182712) | |
| 326-437, gnl|bosTau2|chr12 (16099599-16099488) | |
| 326-437, gnl|canFam2|chr25 (10964114-10964030) | |
| 326-437, gnl|danRer3|chr15 (1235113-1235029) | |
| 326-437, gnl|dasNov1|scaffold_24525 (3636-3552) | |
| 326-437, gnl|echTel1|scaffold_309306 (59366-59285) | |
| 326-437, gnl|fr1|chrUn (260731849-260731768) | |
| 326-437, gnl|galGal2|chr1 (166740016-166739932) | |
| 326-437, gnl|hg17|chr13 (31619966-31620050) | |
| 326-437, gnl|Hg17|chr13 (31619974-31620085) | |
| 326-437, gnl|loxAfr1|scaffold_981 (1666-1750) | |
| 326-437, gnl|mm7|chr5 (149303280-149303364) | |
| 326-437, gnl|Mm7|chr5 (149303288-149303399) | |
| 326-437, gnl|monDom2|scaffold_15 (42575006-42575090) | |
| 326-437, gnl|oryCun1|scaffold_215408 (154997-154913) | |
| 326-437, gnl|panTro1|chr14 (30814924-30815008) | |
| 326-437, gnl|rheMac2|chr17 (11516126-11516210) | |
| 326-437, gnl|rn3|chr12 (5018441-5018357) | |
| 326-437, gnl|tetNig1|chr7 (2433741-2433822) | |
| 326-437, gnl|xenTro1|scaffold_384 (1181506-1181422) | |
| 522-701, gnl|bosTau2|chr12 (16092968-16092789) | |
| 522-701, gnl|canFam2|chr25 (10955577-10955387) | |
| 522-701, gnl|danRer3|chr15 (1234534-1234353) | |
| 522-701, gnl|dasNov1|scaffold_91954 (6371-6183) | |
| 522-701, gnl|echTel1|scaffold_285727 (3896-4082) | |
| 522-701, gnl|fr1|chrUn (56861294-56861486) | |
| 522-701, gnl|galGal2|chr1 (166736403-166736213) | |
| 522-701, gnl|hg17|chr13 (31627623-31627813) | |
| 522-701, gnl|Hg17|chr13 (31627626-31627805) | |
| 522-701, gnl|loxAfr1|scaffold_981 (11794-11971) | |
| 522-701, gnl|mm7|chr5 (149311967-149312149) | |
| 522-701, gnl|Mm7|chr5 (149311970-149312148) | |
| 522-701, gnl|monDom2|scaffold_15 (42585291-42585481) | |
| 522-701, gnl|oryCun1|scaffold_214616 (83286-83479) | |
| 522-701, gnl|panTro1|chr14 (30822666-30822856) | |
| 522-701, gnl|rheMac2|chr17 (11524071-11524260) | |
| 522-701, gnl|rn3|chr12 (5011569-5011387) | |
| 522-701, gnl|tetNig1|chr7 (2434485-2434672) | |
| 522-701, gnl|xenTro1|scaffold_384 (1179944-1179757) | |
| 935-1116, gnl|bosTau2|chr12 (16076055-16075874) | |
| 935-1116, gnl|Hg17|chr13 (31643147-31643328) | |
| 935-1116, gnl|Mm7|chr5 (149319146-149319327) |