Ss1.1-Tra1-TCH01A060036.5
|
ATAATTATTTAATCCAATTCAGATGAGTCTGTGTATCAGTTAACATCATAAAGTGAGCCT
CTAGGAGTGATTTGGATTTTTTAAGACCTGCTTTTTGGAGATAGGCTTCTTTAAGAATGT
CTCCTTTGCCAAAGTTACTTAGCAGATAAAGGTTCTGACAGCTTGTTAAGAGTGGGCCTT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------CCCCCAAAAAAA
AAGAAAGAAAAGAAAAAGAAAAAAAAGAATGGGCCTTGGAACCTGCACAGAAGGAACATG
AAACCAAAGATGAGCTATCAAGACAAATGCGGAGCCTTCCTCTTTTCAAATTATTAACGC
TGGTATCACATTTCACAGCATGCAGGCTTTGGGGTATAGAGCAGCATGGAGTGATAGTAT
TTTTTTCTACGCATATCGCACCCATCCATGAAAGCAATTTTAAGTCTGGGCATCATGTTC
TCTGAATGCTTTGTGTACCTGCCCACAAGAACCCTGGGGAAGGCACAATAAATGAACTTG
GTTTGAACTGGAATTCGGAAGGTACGTTTCTTTCCCGTCTGCAGGCGCACTCGGAGAAGT
GCGTCCTCCTCTCACTCACAGACCAGTCTTGCTTTTGAAGGATCCCCAACCCTGTCACCA
CTTGGACAGATGCAAACGTTTTTCCTTCACTCCTGGTGTTTTTCTTGTCATCTTCCTGGG
ACCATCAAACCCAGATGAGCCAGCCAGCTTAAACGAAGAAATCGAGGTGAAGGCTGCTCT
TCCAAGCAACAAGCCAGCTGGAAAAATTGACCCTGAGCAGCTTAAGCTCCCACAGTGCTC
TCAGGACCCAGTCAGGCCGTCTTTGCGGCCGTGTTATCAGAGCAGAGCCTCAGCCCTGCT
CGGGGCCCTGTGCCCAGTCTGAGGAATGCGGGGCTCCAGGTGTCCTTTGTGTCCTTCAGC
AGGCCTTGCCGTCAAGCACAGGGACCTGAGCACTGTATTGGTCCCACACTGTATTTCTCA
GCAGGCAGCCCCCTTTCCAGAGAGAAGGCCTCCACC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATAATTATTTAATCCAATTCAGATGAGTCTGTGTATCAGTTAACATCATAAAGTGAGCCT
CTAGGAGTGATTTGGATTTTTTAAGACCTGCTTTTTGGAGATAGGCTTCTTTAAGAATGT
CTCCTTTGCCAAAGTTACTTAGCAGATAAAGGTTCTGACAGCTTGTTAAGAGTGGGCCTT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------CCCCCAAAAAAA
AAGAAAGAAAAGAAAAAGAAAAAAAAGAATGGGCCTTGGAACCTGCACAGAAGGAACATG
AAACCAAAGATGAGCTATCAAGACAAATGCGGAGCCTTCCTCTTTTCAAATTATTAACGC
TGGTATCACATTTCACAGCATGCAGGCTTTGGGGTATAGAGCAGCATGGAGTGATAGTAT
TTTTTTCTACGCATATCGCACCCATCCATGAAAGCAATTTTAAGTCTGGGCATCATGTTC
TCTGAATGCTTTGTGTACCTGCCCACAAGAACCCTGGGGAAGGCACAATAAATGAACTTG
GTTTGAACTGGAATTCGGAAGGTACGTTTCTTTCCCGTCTGCAGGCGCACTCGGAGAAGT
GCGTCCTCCTCTCACTCACAGACCAGTCTTGCTTTTGAAGGATCCCCAACCCTGTCACCA
CTTGGACAGATGCAAACGTTTTTCCTTCACTCCTGGTGTTTTTCTTGTCATCTTCCTGGG
ACCATCAAACCCAGATGAGCCAGCCAGCTTAAACGAAGAAATCGAGGTGAAGGCTGCTCT
TCCAAGCAACAAGCCAGCTGGAAAAATTGACCCTGAGCAGCTTAAGCTCCCACAGTGCTC
TCAGGACCCAGTCAGGCCGTCTTTGCGGCCGTGTTATCAGAGCAGAGCCTCAGCCCTGCT
CGGGGCCCTGTGCCCAGTCTGAGGAATGCGGGGCTCCAGGTGTCCTTTGTGTCCTTCAGC
AGGCCTTGCCGTCAAGCACAGGGACCTGAGCACTGTATTGGTCCCACACTGTATTTCTCA
GCAGGCAGCCCCCTTTCCAGAGAGAAGGCCTCCACC
|
|
17-171, gnl|bosTau2|chr13 (25034787-25034939) |
|
17-171, gnl|canFam2|chr24 (5972598-5971835) |
|
17-171, gnl|dasNov1|scaffold_978 (94629-95412) |
|
17-171, gnl|echTel1|scaffold_184428 (6376-5587) |
|
17-171, gnl|hg17|chr20 (20338431-20339221) |
|
17-171, gnl|Hg17|chr20 (20338881-20338735) |
|
17-171, gnl|loxAfr1|scaffold_63389 (1445-2251) |
|
17-171, gnl|mm7|chr2 (145999091-145999809) |
|
17-171, gnl|monDom2|scaffold_1 (55701380-55702277) |
|
17-171, gnl|oryCun1|scaffold_204730 (20800-21568) |
|
17-171, gnl|panTro1|chr21 (20241954-20242751) |
|
17-171, gnl|rheMac2|chr10 (53706995-53707801) |
|
17-171, gnl|rn3|chr3 (134788160-134788826) |
| |
|
217-1006, gnl|bosTau2|chr13 (25034936-25035748) |
|
217-1006, gnl|Hg17|chr20 (20338738-20337906) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
17-171, gnl|bosTau2|chr13 (25034787-25034939) |
|
17-171, gnl|canFam2|chr24 (5972598-5971835) |
|
17-171, gnl|dasNov1|scaffold_978 (94629-95412) |
|
17-171, gnl|echTel1|scaffold_184428 (6376-5587) |
|
17-171, gnl|hg17|chr20 (20338431-20339221) |
|
17-171, gnl|Hg17|chr20 (20338881-20338735) |
|
17-171, gnl|loxAfr1|scaffold_63389 (1445-2251) |
|
17-171, gnl|mm7|chr2 (145999091-145999809) |
|
17-171, gnl|monDom2|scaffold_1 (55701380-55702277) |
|
17-171, gnl|oryCun1|scaffold_204730 (20800-21568) |
|
17-171, gnl|panTro1|chr21 (20241954-20242751) |
|
17-171, gnl|rheMac2|chr10 (53706995-53707801) |
|
17-171, gnl|rn3|chr3 (134788160-134788826) |
| |
|
217-1006, gnl|bosTau2|chr13 (25034936-25035748) |
|
217-1006, gnl|Hg17|chr20 (20338738-20337906) |
