Ss1.1-Tra1-TCH01A110022.5
               |  | GTTTAATAAAAAAAAAAAAAAACAACATATTTCAACCAAGCAGACCCCCTGCAAACCTTT
TCACAGAATATTCTAAACCTTTCATTTAAAATATGGGGGAATGAATTTTAACCCATTTTA
CAGGACTGTCAATCCCCTCCAATTAATGAAGGAGTAGTATAAAAAAGAGACACTCGACAG
AATTGGAGATGAAAAGAGGCTGAAACAGAACTGATTTTCAGGATATTGGTTTTGATAATA
GAAGGATAGCTATGATCTGTAGTTGATAAATGAGGCTCATTATGTAAGGGATGATAAATG
CAGATGTTCCTGGCTAATAGAAAAGTCAGCATACAAATTTCGCGGTAGCAAATGGGAGAC
TGGAAGGTTCTGACCAGCTTTCCAATGACCTGCGTGAGGCCATGGAGTCTCCCCTGCGGC
CTCACAGGCTGGGGTGCTTGCAGCTCTCGGGTCCGTCTGCAAAGAGGTGCAGAACCATAC
CCGGACATGAGCCTCTCGCACCAGAGGGCCTGTCTCTGAGCACAGGGGGTGGGCAGCAGT
GCTGCGCTTTCAGTAGAACGACCCATGGAAAGCAGTGCCTGTGAGGGCTTCTCACCTGGG
GGCAGCGGGGCTCCAGCGAGAGAGCTGTCAGCAGCGGGGCTCCTTGGAGTTGTAATTTGA
ACTTTTCATGCTAGAATGAAAAATGACGTGTTTGGAGGTACCTTTCTTATTCTAATGTGC
TGCTGCTGTTTGTACAGGGTTCTTGGCATGCTGAGCGAGAAAGCCTCCCCTCTCCTTTCC
TCCTAGCACTTCTCCTCTTCCCTGGTATCGGGAGGGGTGGCGGGCTCTTCCACGTTGTGG
CCACTGTGAGACGGTGAATGCCTTTTACTTCCTGTTAGAAGTTTTAATTTACAGGCTTCC
ACTTTCTAGGGG | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | GTTTAATAAAAAAAAAAAAAAACAACATATTTCAACCAAGCAGACCCCCTGCAAACCTTT
TCACAGAATATTCTAAACCTTTCATTTAAAATATGGGGGAATGAATTTTAACCCATTTTA
CAGGACTGTCAATCCCCTCCAATTAATGAAGGAGTAGTATAAAAAAGAGACACTCGACAG
AATTGGAGATGAAAAGAGGCTGAAACAGAACTGATTTTCAGGATATTGGTTTTGATAATA
GAAGGATAGCTATGATCTGTAGTTGATAAATGAGGCTCATTATGTAAGGGATGATAAATG
CAGATGTTCCTGGCTAATAGAAAAGTCAGCATACAAATTTCGCGGTAGCAAATGGGAGAC
TGGAAGGTTCTGACCAGCTTTCCAATGACCTGCGTGAGGCCATGGAGTCTCCCCTGCGGC
CTCACAGGCTGGGGTGCTTGCAGCTCTCGGGTCCGTCTGCAAAGAGGTGCAGAACCATAC
CCGGACATGAGCCTCTCGCACCAGAGGGCCTGTCTCTGAGCACAGGGGGTGGGCAGCAGT
GCTGCGCTTTCAGTAGAACGACCCATGGAAAGCAGTGCCTGTGAGGGCTTCTCACCTGGG
GGCAGCGGGGCTCCAGCGAGAGAGCTGTCAGCAGCGGGGCTCCTTGGAGTTGTAATTTGA
ACTTTTCATGCTAGAATGAAAAATGACGTGTTTGGAGGTACCTTTCTTATTCTAATGTGC
TGCTGCTGTTTGTACAGGGTTCTTGGCATGCTGAGCGAGAAAGCCTCCCCTCTCCTTTCC
TCCTAGCACTTCTCCTCTTCCCTGGTATCGGGAGGGGTGGCGGGCTCTTCCACGTTGTGG
CCACTGTGAGACGGTGAATGCCTTTTACTTCCTGTTAGAAGTTTTAATTTACAGGCTTCC
ACTTTCTAGGGG | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map