Non-Coding RNA Search

Ss1.1-Tra1-TCH01B120089.5

Sequence:


               
               TTTTATGGCCGGCTTTCTTTCCGCTGACTGAGTTGTACTGCTCAATCAGTAAGGAAAACT
CCACTCATAGACTAGAGGTCATTGTGTTTGGAAAAG------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AAAAAGACAAAAAAAAAAAAAAAA
AAGACTAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGTCTCAAATAAGAGGTTGTTGGG
ACTTTTCTTTTAAGAGCTAATGAAAGGCTTGCCTTTCCCAGTTAGCAGAGTGAAGCCACA
TTGCAGCATTTGAATGGCTTTCCTAAACTTTCTGTCTGCTCTGGGACACCAAAGATCAGC
AGTGTCCTGGTCACCTTTTCAAGCTTGCCTGTCTGTCACTCCCGGTGAAGCTAGCTTGAC
TGAGCGGTGAGGGGGACAAAACAGCCATTGATTGGAGCCTTGCGGAAACTGACATTTCTT
CAGTTTTAGCAGGTCCCAGATATCCTTTCTGGGCTCAAACAATAATCTAGATATCACTCT
TTGTACGCTCTTGGGTGTGTATGCATTTCCTGCCCCGGGGCCAGGATTGGAAAGTGGATT
TTTGCTAAACAATTAATATTCAGACCTTTATTAGACACTATAAAATATTAAACCTAGCCC
TGAGAGTTTCAGACGATTATTTCTTCTTGCTTAAGTTATCTTTCACTTTGCTTTGCTGCC
ATAATTAGAGGGAGAAGAACAGAAATCCTGTTTCTTGGTCCGAGTGCTGTTTTTATCAGC
AAAAACATGCATTGTTTTACTTATCGACAGGCCGCGCTGCCGTTCACTCGGGTTGCGTTT
AATAATAATGTTCTCTTGGGCCAAATGTCAAATATATCCCTAATGAGTTCAGTGCCATCA
CCAAGCCTGCTTATGTTCCCTGCCAATAGTCGGCCTTGTTAGAGCAGATCACATCAGCTG
GCGTTCAAGCACAGACGCCAAGGTCGGGGCATGAGCAAGCGAGAAAAGATGAAGATTTAA
AGCAAAGTCTGTCCCTGTCAGTGAAGGGCGGGCGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTATGGCCGGCTTTCTTTCCGCTGACTGAGTTGTACTGCTCAATCAGTAAGGAAAACT
CCACTCATAGACTAGAGGTCATTGTGTTTGGAAAAG------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AAAAAGACAAAAAAAAAAAAAAAA
AAGACTAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGTCTCAAATAAGAGGTTGTTGGG
ACTTTTCTTTTAAGAGCTAATGAAAGGCTTGCCTTTCCCAGTTAGCAGAGTGAAGCCACA
TTGCAGCATTTGAATGGCTTTCCTAAACTTTCTGTCTGCTCTGGGACACCAAAGATCAGC
AGTGTCCTGGTCACCTTTTCAAGCTTGCCTGTCTGTCACTCCCGGTGAAGCTAGCTTGAC
TGAGCGGTGAGGGGGACAAAACAGCCATTGATTGGAGCCTTGCGGAAACTGACATTTCTT
CAGTTTTAGCAGGTCCCAGATATCCTTTCTGGGCTCAAACAATAATCTAGATATCACTCT
TTGTACGCTCTTGGGTGTGTATGCATTTCCTGCCCCGGGGCCAGGATTGGAAAGTGGATT
TTTGCTAAACAATTAATATTCAGACCTTTATTAGACACTATAAAATATTAAACCTAGCCC
TGAGAGTTTCAGACGATTATTTCTTCTTGCTTAAGTTATCTTTCACTTTGCTTTGCTGCC
ATAATTAGAGGGAGAAGAACAGAAATCCTGTTTCTTGGTCCGAGTGCTGTTTTTATCAGC
AAAAACATGCATTGTTTTACTTATCGACAGGCCGCGCTGCCGTTCACTCGGGTTGCGTTT
AATAATAATGTTCTCTTGGGCCAAATGTCAAATATATCCCTAATGAGTTCAGTGCCATCA
CCAAGCCTGCTTATGTTCCCTGCCAATAGTCGGCCTTGTTAGAGCAGATCACATCAGCTG
GCGTTCAAGCACAGACGCCAAGGTCGGGGCATGAGCAAGCGAGAAAAGATGAAGATTTAA
AGCAAAGTCTGTCCCTGTCAGTGAAGGGCGGGCGGC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               161-480, gnl|bosTau2|chr12 (29743534-29743839)
               

               
               161-480, gnl|Hg17|chr10 (34561430-34561108)
               


               
               578-996, gnl|bosTau2|chr12 (29744159-29744582)
               

               
               578-996, gnl|Hg17|chr10 (34560973-34560527)
               

               
               578-996, gnl|Mm7|chr8 (126113597-126114060)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-480, gnl|bosTau2|chr12 (29743534-29743839)
               

               
               161-480, gnl|Hg17|chr10 (34561430-34561108)
               


               
               578-996, gnl|bosTau2|chr12 (29744159-29744582)
               

               
               578-996, gnl|Hg17|chr10 (34560973-34560527)
               

               
               578-996, gnl|Mm7|chr8 (126113597-126114060)

	161-480, gnl\|bosTau2\|chr12 (29743534-29743839)
	161-480, gnl\|Hg17\|chr10 (34561430-34561108)

	578-996, gnl\|bosTau2\|chr12 (29744159-29744582)
	578-996, gnl\|Hg17\|chr10 (34560973-34560527)
	578-996, gnl\|Mm7\|chr8 (126113597-126114060)