Ss1.1-Tra1-TCH01C030023.5
               |  | AGGTAGCCAGGAGGTGGCAGGGGGAGGCCGGGCGGTATCTGGTGACATCCACTGCATCTC
TGTAGGGGTGGGGTTCTCAGGGAAGCCTCTGGCTGGCGGCACCACCCCTCTTTACATCTG
GATTCTTGGGGTCTGCCTTTGGGGTGGCCTTTCTTGGAGTTGTCGTTGACCTTGAGCCCT
GGGGTCTGAGCCTCCTCTCCCTGAACCGGCCTCAGGCTCAGATGGCAGCAGAGGCAGAGG
CAGCAGTGCTGGGGCAGCGTCGGACGGCAGTGGAAACAACACTTCGGGAGACCCAGGAGG
AGAACGACGAGTTCCGACGGCGAATCCTGGGTCTGGAGCAGCAATTGAAGGAGGCGCGAG
GCTTGGCGGAAGGCGGGGAAGTGGCGGAGGCACGGCTTCGGGACAAGGTGCAGCGGCTGG
AGGTCAGTACTTTCGCCGATCTTGTTAGCTTCCTCCTGGCGCTGTCTCCTCATCCCTGCC
TAAATCCTCAGCCATCACTTTGATTTTGTGTGGACTGTACTTCTGTTTGCCTTCCCAGCC
TTCTGGTAACCTTGGGTTTATTTCCTGGCGTATGCTTTGGTGTGACTTTCTCAAGTGTCA
CTGGCATTTTTGTCTGTCTTCTATCTACTTTTTGCCTGTTCTCTGTTCTTCGCTGGGTCC
TCTGAGCCTGTTTTTGTGGCCCACCTTTTTAAAACAAGCATCTCTTCCTCCTTCCTCCCA
TCCACTCACCTCCAAATGGCTTGAGCCCGAGGTTCGCATCCTGTCATCCAATGGTTCTCT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | AGGTAGCCAGGAGGTGGCAGGGGGAGGCCGGGCGGTATCTGGTGACATCCACTGCATCTC
TGTAGGGGTGGGGTTCTCAGGGAAGCCTCTGGCTGGCGGCACCACCCCTCTTTACATCTG
GATTCTTGGGGTCTGCCTTTGGGGTGGCCTTTCTTGGAGTTGTCGTTGACCTTGAGCCCT
GGGGTCTGAGCCTCCTCTCCCTGAACCGGCCTCAGGCTCAGATGGCAGCAGAGGCAGAGG
CAGCAGTGCTGGGGCAGCGTCGGACGGCAGTGGAAACAACACTTCGGGAGACCCAGGAGG
AGAACGACGAGTTCCGACGGCGAATCCTGGGTCTGGAGCAGCAATTGAAGGAGGCGCGAG
GCTTGGCGGAAGGCGGGGAAGTGGCGGAGGCACGGCTTCGGGACAAGGTGCAGCGGCTGG
AGGTCAGTACTTTCGCCGATCTTGTTAGCTTCCTCCTGGCGCTGTCTCCTCATCCCTGCC
TAAATCCTCAGCCATCACTTTGATTTTGTGTGGACTGTACTTCTGTTTGCCTTCCCAGCC
TTCTGGTAACCTTGGGTTTATTTCCTGGCGTATGCTTTGGTGTGACTTTCTCAAGTGTCA
CTGGCATTTTTGTCTGTCTTCTATCTACTTTTTGCCTGTTCTCTGTTCTTCGCTGGGTCC
TCTGAGCCTGTTTTTGTGGCCCACCTTTTTAAAACAAGCATCTCTTCCTCCTTCCTCCCA
TCCACTCACCTCCAAATGGCTTGAGCCCGAGGTTCGCATCCTGTCATCCAATGGTTCTCT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map