Non-Coding RNA Search

Ss1.1-Tra1-TCH01C070097.5

Sequence:


               
               TATAAAAAAGAGAAAGCAAAAAACAAAACAAAACAAAAAAAACTCCACAAAACTCCTGTT
TAAAATTGCATAAAAATAAGAAACTAGGAATAAATTTAACTGAGGAAGTGAAAGAAGTAT
ACGTTGAAAAGTATAAAACATTGACAGAGGAATCTGTGATTCAAAGAAGTGGAAAGGTGT
CTGTGCTTTTGGATTGGAAGAATTAATATTTTTAAAAATGGCCATACTATCCAAAGCAAT
CTACAGCTTTAATGTGATTCCTGTCAAATTACATGTGACATATTTCACAGAACTAGAATA
AATAATCCTAAAATGGAACCATGAAAGACCCAGAATTGCCAAAGCAATCCTGAGAACAAA
AGAACAGAGCTGGTGGTATAACCCTTCCGGACTTCAGACTATACTACGAAGCTACAGTAA
TCAAAACAGCATGGTATTGGCACAAAAAAAGAGACATATACAACAGGGCCAAATAGCCCA
GAAATAAACCCACATATTACAGTCAATCTATGATAAAGGAGATAAGAATATACGATAGAG
AAAAGATAGTCCTTCAACAAGTGGTCTTGGGAAAGCCAGAGAGCTACGTGTAAAACAATG
AAATTAGGACATTCTCTTACCCCATATAGAAAAATAAACTCAAACTGGTGTAAAGACCTA
AATGTTAAGACATGACAACATAAAATAGGCAAAACCCTCTTTGACATTAATTGTAGTGAT
ATTTTCTTAGGA------------------------------------------------
------------AAAGCTTTTGCACAGCAAAGGAAACTATCAACAAAGAAACAACCTATG
GAATGGGAGAAAATATTTGCAAATAATATGACAACGGGTTGATATCCAAAATACACAAAC
AGGGAGTTTCTGATGCAGTTCAGCAGTAACAGACCT------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AAAAAGAAAGTCAAAATATACAAACAGCTCACCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATAAAAAAGAGAAAGCAAAAAACAAAACAAAACAAAAAAAACTCCACAAAACTCCTGTT
TAAAATTGCATAAAAATAAGAAACTAGGAATAAATTTAACTGAGGAAGTGAAAGAAGTAT
ACGTTGAAAAGTATAAAACATTGACAGAGGAATCTGTGATTCAAAGAAGTGGAAAGGTGT
CTGTGCTTTTGGATTGGAAGAATTAATATTTTTAAAAATGGCCATACTATCCAAAGCAAT
CTACAGCTTTAATGTGATTCCTGTCAAATTACATGTGACATATTTCACAGAACTAGAATA
AATAATCCTAAAATGGAACCATGAAAGACCCAGAATTGCCAAAGCAATCCTGAGAACAAA
AGAACAGAGCTGGTGGTATAACCCTTCCGGACTTCAGACTATACTACGAAGCTACAGTAA
TCAAAACAGCATGGTATTGGCACAAAAAAAGAGACATATACAACAGGGCCAAATAGCCCA
GAAATAAACCCACATATTACAGTCAATCTATGATAAAGGAGATAAGAATATACGATAGAG
AAAAGATAGTCCTTCAACAAGTGGTCTTGGGAAAGCCAGAGAGCTACGTGTAAAACAATG
AAATTAGGACATTCTCTTACCCCATATAGAAAAATAAACTCAAACTGGTGTAAAGACCTA
AATGTTAAGACATGACAACATAAAATAGGCAAAACCCTCTTTGACATTAATTGTAGTGAT
ATTTTCTTAGGA------------------------------------------------
------------AAAGCTTTTGCACAGCAAAGGAAACTATCAACAAAGAAACAACCTATG
GAATGGGAGAAAATATTTGCAAATAATATGACAACGGGTTGATATCCAAAATACACAAAC
AGGGAGTTTCTGATGCAGTTCAGCAGTAACAGACCT------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AAAAAGAAAGTCAAAATATACAAACAGCTCACCCAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               3-434, gnl|bosTau2|chr1 (56191590-56191154)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-434, gnl|bosTau2|chr1 (56191590-56191154)