Ss1.1-Tra1-TCH01D010061.5
|
AGGCCACAGAAGTTAAAAAATCGCTCCAGGTCAGCTGCTGCCCGCGAGAAGCGCTCACTC
AGGTCCGATTTGGAACGTTGCAAACCGGGGGGCCGGGCCGGGCTGGAGGCAGCAGTGCCT
GGCGATGGGCAGGGCTGGGCTGGTGAGGCTGGCAGCGGAAGGACATCCACGCGGCGGACT
GCAGCAGTACTGGGTGGTGGGCGTGGGGGCGTGGCTGGTGGAGGCTGGCAGGCCCCCTCG
ACCCGTCCAGGGGTACGGCTGGCCTCGGCAGGGGACACTGGACTATCACACAAGTTGATG
AGGTTGCTAAGGATGTCCAGGTCCAGCTGGGGCCGGCGGCCTGGGCCAGGCAGCACTCGG
CGGCTAGGCGTGAGCACCGTGCGGCGAGTCCCAGGGCTGAAGAGTGGCTGTTTGCACAGC
AGGGGCTGCACAGGTTCCTGGCGGGTGTTGGCTACATGCAGGCTCTTGACGTACTTGGCC
TTGTCAGCCTCCAGGCGTTCTACAGCGCTAGGTTTCCGGGCTCCACTGTCTGCTGGACGC
CGTAGCAGGTAGCCGGGGACCTTGGTCCGGAGGCGGAAAGGCAGGGCGGCAGGGGTATCC
CGGGCTCCCGGAGTCAGCGTGTCCACGGGCATGGCTGTAACATACCCCCGAAGGCTTCTG
TCTCAGGAGACTAGCAAAATGAGGAAACAGAGATCCAGGCAGAAGGCTGGCAGCTGGACT
CCGCAACGGCTGCAGAGAGGAAAGAAAGAAAAAAGGGGCAGTGCACACTCAGACAAAAGG
CTCGGCAAAGACGACCCAGGCGGGGAACGGTCGCACACAACGCGTCTCGGGAGGCCCCAG
CCCCGCGTAGGGAAGCACGGGAGGTCCTTCTGAGCTGCCCTCAACACCCAAGAGGAGGTA
GGGGACTCGACTGTTCCAAGCCCCCAACAGAGTAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AGGCCACAGAAGTTAAAAAATCGCTCCAGGTCAGCTGCTGCCCGCGAGAAGCGCTCACTC
AGGTCCGATTTGGAACGTTGCAAACCGGGGGGCCGGGCCGGGCTGGAGGCAGCAGTGCCT
GGCGATGGGCAGGGCTGGGCTGGTGAGGCTGGCAGCGGAAGGACATCCACGCGGCGGACT
GCAGCAGTACTGGGTGGTGGGCGTGGGGGCGTGGCTGGTGGAGGCTGGCAGGCCCCCTCG
ACCCGTCCAGGGGTACGGCTGGCCTCGGCAGGGGACACTGGACTATCACACAAGTTGATG
AGGTTGCTAAGGATGTCCAGGTCCAGCTGGGGCCGGCGGCCTGGGCCAGGCAGCACTCGG
CGGCTAGGCGTGAGCACCGTGCGGCGAGTCCCAGGGCTGAAGAGTGGCTGTTTGCACAGC
AGGGGCTGCACAGGTTCCTGGCGGGTGTTGGCTACATGCAGGCTCTTGACGTACTTGGCC
TTGTCAGCCTCCAGGCGTTCTACAGCGCTAGGTTTCCGGGCTCCACTGTCTGCTGGACGC
CGTAGCAGGTAGCCGGGGACCTTGGTCCGGAGGCGGAAAGGCAGGGCGGCAGGGGTATCC
CGGGCTCCCGGAGTCAGCGTGTCCACGGGCATGGCTGTAACATACCCCCGAAGGCTTCTG
TCTCAGGAGACTAGCAAAATGAGGAAACAGAGATCCAGGCAGAAGGCTGGCAGCTGGACT
CCGCAACGGCTGCAGAGAGGAAAGAAAGAAAAAAGGGGCAGTGCACACTCAGACAAAAGG
CTCGGCAAAGACGACCCAGGCGGGGAACGGTCGCACACAACGCGTCTCGGGAGGCCCCAG
CCCCGCGTAGGGAAGCACGGGAGGTCCTTCTGAGCTGCCCTCAACACCCAAGAGGAGGTA
GGGGACTCGACTGTTCCAAGCCCCCAACAGAGTAAA
|
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gi|62460616|ref|NP_001014961.1| |
Protein identifier
|
gi|62460616|ref|NP_001014961.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-792, gnl|bosTau2|chr13 (41819514-41820297) |
|
1-792, gnl|Hg17|chr20 (774079-773283) |
|
1-792, gnl|Mm7|chr2 (151711071-151711838) |
| |
|
797-932, gnl|bosTau2|chr13 (41657577-41657713) |
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797-932, gnl|canFam2|chr24 (23077102-23076785) |
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797-932, gnl|dasNov1|scaffold_30162 (15743-16085) |
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797-932, gnl|hg17|chr20 (762313-762639) |
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797-932, gnl|Hg17|chr20 (762522-762391) |
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797-932, gnl|loxAfr1|scaffold_63104 (8053-8368) |
|
797-932, gnl|mm7|chr2 (151721077-151720815) |
|
797-932, gnl|monDom2|scaffold_1 (130714138-130714489) |
|
797-932, gnl|oryCun1|scaffold_149467 (9727-9424) |
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797-932, gnl|panTro1|chr21 (812806-813133) |
|
797-932, gnl|rheMac2|chr10 (34109496-34109823) |
|
797-932, gnl|rn3|chr3 (142241875-142241616) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-792, gnl|bosTau2|chr13 (41819514-41820297) |
|
1-792, gnl|Hg17|chr20 (774079-773283) |
|
1-792, gnl|Mm7|chr2 (151711071-151711838) |
| |
|
797-932, gnl|bosTau2|chr13 (41657577-41657713) |
|
797-932, gnl|canFam2|chr24 (23077102-23076785) |
|
797-932, gnl|dasNov1|scaffold_30162 (15743-16085) |
|
797-932, gnl|hg17|chr20 (762313-762639) |
|
797-932, gnl|Hg17|chr20 (762522-762391) |
|
797-932, gnl|loxAfr1|scaffold_63104 (8053-8368) |
|
797-932, gnl|mm7|chr2 (151721077-151720815) |
|
797-932, gnl|monDom2|scaffold_1 (130714138-130714489) |
|
797-932, gnl|oryCun1|scaffold_149467 (9727-9424) |
|
797-932, gnl|panTro1|chr21 (812806-813133) |
|
797-932, gnl|rheMac2|chr10 (34109496-34109823) |
|
797-932, gnl|rn3|chr3 (142241875-142241616) |
