Ss1.1-Tra1-TCH01D040037.5
               |  | AAAAAGCCAGTATCCTTTTCGCCCCTGGATCGTGTTCTGCTGCACCCCGCACCCCTCATC
CCGGCCCCTCGTCCCAGTCCCTGCTTTCCAGCCCGGCCCCTGCCCCGCCCTGACCCAAAC
CGGCCCAGACGCCATGGAGAGCTGGCCCTGGCCGTCGGGCGGCGCCTGGCTGCTCGTGGC
GGCCCGTGCGCTGCTGCAGCTGCTGCGCGCAGACCTGCGTCTGGGCCGCCCGCTGCTGGC
GGCGCTGGCGCTTCTGGCCGCGCTCGACTGGCTGTGCCAGCGCCTGCTGCCCCCGCTGGC
CGCACTTGTCGTGCTGGCTGCCGCGGGTTGGATCGCGTTGTCCCGCTTGGCGCGGCCGCA
ACGCCTGCCGGTGGCGACTCGCGCGGTGCTCATCACCGGCTGTGACTCTGGTTTTGGCAA
AGCGACTGCCAAGAAGCTGGACGCCATGGGCTTCACAGTGCTGGCCACCGTGTTGGAGTT
GGATAGCCCTGGTGCCCAAGAGCTGCGTGCTTGCTG | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | AAAAAGCCAGTATCCTTTTCGCCCCTGGATCGTGTTCTGCTGCACCCCGCACCCCTCATC
CCGGCCCCTCGTCCCAGTCCCTGCTTTCCAGCCCGGCCCCTGCCCCGCCCTGACCCAAAC
CGGCCCAGACGCCATGGAGAGCTGGCCCTGGCCGTCGGGCGGCGCCTGGCTGCTCGTGGC
GGCCCGTGCGCTGCTGCAGCTGCTGCGCGCAGACCTGCGTCTGGGCCGCCCGCTGCTGGC
GGCGCTGGCGCTTCTGGCCGCGCTCGACTGGCTGTGCCAGCGCCTGCTGCCCCCGCTGGC
CGCACTTGTCGTGCTGGCTGCCGCGGGTTGGATCGCGTTGTCCCGCTTGGCGCGGCCGCA
ACGCCTGCCGGTGGCGACTCGCGCGGTGCTCATCACCGGCTGTGACTCTGGTTTTGGCAA
AGCGACTGCCAAGAAGCTGGACGCCATGGGCTTCACAGTGCTGGCCACCGTGTTGGAGTT
GGATAGCCCTGGTGCCCAAGAGCTGCGTGCTTGCTG | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map