Ss1.1-Tra1-TCH01D040048.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGAGGCCAGCTACTGCCCGCCCTCTTGGCCTCCAGGGTCCCGACCATCCAGGAGCAGAG CCTGGCCCTGCTGCTACAGCTCGCCCAGACCGAGAACGGACGGGGCCTGATCATCAGCCA CCTTGACCTGACCAGGTTGTTGGAAGCCCTGGTGTCATTTCTTGATTTCTCAGAGAAGAA GGCCAACTCAGCCATGGCACTACTCACAGACTTGGCTCTGGAAGAGAGGTTCCACGTTTG GTTCCAAGCCAGCCTTCCAGGTGCGCTCCCTGCGCTGGCAGCCGTGCTGAAGAGAGATCC CAGGGTCACCAGCACGTCAGCCCTCTGCCAGTGCATTGCCATCCTGGGCAACCTCAGCGC CGAGCCTGCTGCCCGAAGACAGCTGTTTGCCTCTGAGGAATTCGGGGATGCCTGCTTGGG GCTCATGGCCAAGTGCGAAGAGGACATGGACCTGTTCAGAGAAGTCATGTATACCCTCCT GGGACTCATGATGAACTTGTGTCTTCAGCCCTCCTTGGTTTCTGAGGTGTGGGCCATGGA GGTGAGTCGGAAGTGCCTGTCCCTGCTGAACAGCCCGGATGGAGGAATCCTCACAAGAGC CGCTGGTGTCCTCAGTCGCACCCTTTCTTCCTCGCTGACAATTGTTGAGGAGGCCCTGAG AGCCGGAGTGGTGAAGAAAATGATTAAATTCCTGAAGGCGGGAGGCCAGACTGCATCGCG TTATGCTATAAAGATACTGGCCATCTGCACTAATAGTTATCACGAAGCACGAGAAGAAGT GATAAGACTGGATAAAAAGCTCAGTGTTCTGATGCAGCTGCTCGGCTCGGAGGATGAGAT TCTGGTGGGCAACGCCGCCCTCTGCCTGGGGAACTGCATGGAGGTGCCACTGGTGGCCTC GTCCCTGCTGACCACAGACATCGTGCAGGTCTTGCTGAGGCTTGCGGGCGGCGATGCGCA GAAGACAGCTGTGCAGCTGAACGCAGGCATCGCCCTGNGGAAGCTGTGCACGGCCGAGCC CAGGTTTGCTGCTCTTCTGAGAGAGCTTCATGGGATGGAAATTCTNCACTCCACCATGAA GCACGTGGACCGTTCTTGAGCGTCTGTGCGCATTTTGCCAACACAGGATTGTACACTCTG AGTTGTTCCCGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGAGGCCAGCTACTGCCCGCCCTCTTGGCCTCCAGGGTCCCGACCATCCAGGAGCAGAG CCTGGCCCTGCTGCTACAGCTCGCCCAGACCGAGAACGGACGGGGCCTGATCATCAGCCA CCTTGACCTGACCAGGTTGTTGGAAGCCCTGGTGTCATTTCTTGATTTCTCAGAGAAGAA GGCCAACTCAGCCATGGCACTACTCACAGACTTGGCTCTGGAAGAGAGGTTCCACGTTTG GTTCCAAGCCAGCCTTCCAGGTGCGCTCCCTGCGCTGGCAGCCGTGCTGAAGAGAGATCC CAGGGTCACCAGCACGTCAGCCCTCTGCCAGTGCATTGCCATCCTGGGCAACCTCAGCGC CGAGCCTGCTGCCCGAAGACAGCTGTTTGCCTCTGAGGAATTCGGGGATGCCTGCTTGGG GCTCATGGCCAAGTGCGAAGAGGACATGGACCTGTTCAGAGAAGTCATGTATACCCTCCT GGGACTCATGATGAACTTGTGTCTTCAGCCCTCCTTGGTTTCTGAGGTGTGGGCCATGGA GGTGAGTCGGAAGTGCCTGTCCCTGCTGAACAGCCCGGATGGAGGAATCCTCACAAGAGC CGCTGGTGTCCTCAGTCGCACCCTTTCTTCCTCGCTGACAATTGTTGAGGAGGCCCTGAG AGCCGGAGTGGTGAAGAAAATGATTAAATTCCTGAAGGCGGGAGGCCAGACTGCATCGCG TTATGCTATAAAGATACTGGCCATCTGCACTAATAGTTATCACGAAGCACGAGAAGAAGT GATAAGACTGGATAAAAAGCTCAGTGTTCTGATGCAGCTGCTCGGCTCGGAGGATGAGAT TCTGGTGGGCAACGCCGCCCTCTGCCTGGGGAACTGCATGGAGGTGCCACTGGTGGCCTC GTCCCTGCTGACCACAGACATCGTGCAGGTCTTGCTGAGGCTTGCGGGCGGCGATGCGCA GAAGACAGCTGTGCAGCTGAACGCAGGCATCGCCCTGNGGAAGCTGTGCACGGCCGAGCC CAGGTTTGCTGCTCTTCTGAGAGAGCTTCATGGGATGGAAATTCTNCACTCCACCATGAA GCACGTGGACCGTTCTTGAGCGTCTGTGCGCATTTTGCCAACACAGGATTGTACACTCTG AGTTGTTCCCGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
| 5-137, gnl|bosTau2|chr15 (10291617-10291749) | |
| 5-137, gnl|canFam2|chr5 (22853154-22852940) | |
| 5-137, gnl|dasNov1|scaffold_54854 (3641-3428) | |
| 5-137, gnl|echTel1|scaffold_276835 (10950-10736) | |
| 5-137, gnl|hg17|chr11 (112720190-112720404) | |
| 5-137, gnl|Hg17|chr11 (112720242-112720374) | |
| 5-137, gnl|loxAfr1|scaffold_125149 (1331-1127) | |
| 5-137, gnl|mm7|chr9 (49428749-49428539) | |
| 5-137, gnl|Mm7|chr9 (49428695-49428563) | |
| 5-137, gnl|monDom2|scaffold_2 (127727679-127727462) | |
| 5-137, gnl|oryCun1|scaffold_199945 (117744-117530) | |
| 5-137, gnl|panTro1|chr9 (114719613-114719827) | |
| 5-137, gnl|rheMac2|chr14 (111808221-111808435) | |
| 5-137, gnl|rn3|chr8 (52788023-52787809) | |
| 282-428, gnl|bosTau2|chr15 (10299628-10299774) | |
| 282-428, gnl|canFam2|chr5 (22845778-22845506) | |
| 282-428, gnl|dasNov1|scaffold_42900 (968-1208) | |
| 282-428, gnl|galGal2|chr24 (5435919-5435669) | |
| 282-428, gnl|hg17|chr11 (112727907-112728178) | |
| 282-428, gnl|Hg17|chr11 (112727994-112728140) | |
| 282-428, gnl|loxAfr1|scaffold_7207 (32341-32599) | |
| 282-428, gnl|mm7|chr9 (49421211-49420945) | |
| 282-428, gnl|Mm7|chr9 (49421128-49420982) | |
| 282-428, gnl|monDom2|scaffold_2 (127718107-127717814) | |
| 282-428, gnl|oryCun1|scaffold_199945 (111118-110859) | |
| 282-428, gnl|panTro1|chr9 (114727313-114727584) | |
| 282-428, gnl|rheMac2|chr14 (111815919-111816190) | |
| 282-428, gnl|rn3|chr8 (52780088-52779822) | |
| 596-698, gnl|bosTau2|chr15 (10303383-10303485) | |
| 596-698, gnl|canFam2|chr5 (22842108-22841957) | |
| 596-698, gnl|danRer3|chr15 (24185456-24185325) | |
| 596-698, gnl|echTel1|scaffold_101659 (3356-3507) | |
| 596-698, gnl|galGal2|chr24 (5433771-5433613) | |
| 596-698, gnl|hg17|chr11 (112738300-112738449) | |
| 596-698, gnl|Hg17|chr11 (112738333-112738435) | |
| 596-698, gnl|loxAfr1|scaffold_7207 (37132-37284) | |
| 596-698, gnl|mm7|chr9 (49418476-49418328) | |
| 596-698, gnl|Mm7|chr9 (49418442-49418340) | |
| 596-698, gnl|monDom2|scaffold_2 (127711661-127711513) | |
| 596-698, gnl|oryCun1|scaffold_199945 (108794-108645) | |
| 596-698, gnl|panTro1|chr9 (114737688-114737837) | |
| 596-698, gnl|rheMac2|chr14 (111826250-111826399) | |
| 596-698, gnl|rn3|chr8 (52758878-52758730) | |
| 596-698, gnl|tetNig1|chr16 (939710-939601) | |
| 798-1025, gnl|bosTau2|chr15 (10305748-10305975) | |
| 798-1025, gnl|Hg17|chr11 (112740767-112740994) | |
| 798-1025, gnl|Mm7|chr9 (49415621-49415394) |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-137, gnl|bosTau2|chr15 (10291617-10291749) | |
| 5-137, gnl|canFam2|chr5 (22853154-22852940) | |
| 5-137, gnl|dasNov1|scaffold_54854 (3641-3428) | |
| 5-137, gnl|echTel1|scaffold_276835 (10950-10736) | |
| 5-137, gnl|hg17|chr11 (112720190-112720404) | |
| 5-137, gnl|Hg17|chr11 (112720242-112720374) | |
| 5-137, gnl|loxAfr1|scaffold_125149 (1331-1127) | |
| 5-137, gnl|mm7|chr9 (49428749-49428539) | |
| 5-137, gnl|Mm7|chr9 (49428695-49428563) | |
| 5-137, gnl|monDom2|scaffold_2 (127727679-127727462) | |
| 5-137, gnl|oryCun1|scaffold_199945 (117744-117530) | |
| 5-137, gnl|panTro1|chr9 (114719613-114719827) | |
| 5-137, gnl|rheMac2|chr14 (111808221-111808435) | |
| 5-137, gnl|rn3|chr8 (52788023-52787809) | |
| 282-428, gnl|bosTau2|chr15 (10299628-10299774) | |
| 282-428, gnl|canFam2|chr5 (22845778-22845506) | |
| 282-428, gnl|dasNov1|scaffold_42900 (968-1208) | |
| 282-428, gnl|galGal2|chr24 (5435919-5435669) | |
| 282-428, gnl|hg17|chr11 (112727907-112728178) | |
| 282-428, gnl|Hg17|chr11 (112727994-112728140) | |
| 282-428, gnl|loxAfr1|scaffold_7207 (32341-32599) | |
| 282-428, gnl|mm7|chr9 (49421211-49420945) | |
| 282-428, gnl|Mm7|chr9 (49421128-49420982) | |
| 282-428, gnl|monDom2|scaffold_2 (127718107-127717814) | |
| 282-428, gnl|oryCun1|scaffold_199945 (111118-110859) | |
| 282-428, gnl|panTro1|chr9 (114727313-114727584) | |
| 282-428, gnl|rheMac2|chr14 (111815919-111816190) | |
| 282-428, gnl|rn3|chr8 (52780088-52779822) | |
| 596-698, gnl|bosTau2|chr15 (10303383-10303485) | |
| 596-698, gnl|canFam2|chr5 (22842108-22841957) | |
| 596-698, gnl|danRer3|chr15 (24185456-24185325) | |
| 596-698, gnl|echTel1|scaffold_101659 (3356-3507) | |
| 596-698, gnl|galGal2|chr24 (5433771-5433613) | |
| 596-698, gnl|hg17|chr11 (112738300-112738449) | |
| 596-698, gnl|Hg17|chr11 (112738333-112738435) | |
| 596-698, gnl|loxAfr1|scaffold_7207 (37132-37284) | |
| 596-698, gnl|mm7|chr9 (49418476-49418328) | |
| 596-698, gnl|Mm7|chr9 (49418442-49418340) | |
| 596-698, gnl|monDom2|scaffold_2 (127711661-127711513) | |
| 596-698, gnl|oryCun1|scaffold_199945 (108794-108645) | |
| 596-698, gnl|panTro1|chr9 (114737688-114737837) | |
| 596-698, gnl|rheMac2|chr14 (111826250-111826399) | |
| 596-698, gnl|rn3|chr8 (52758878-52758730) | |
| 596-698, gnl|tetNig1|chr16 (939710-939601) | |
| 798-1025, gnl|bosTau2|chr15 (10305748-10305975) | |
| 798-1025, gnl|Hg17|chr11 (112740767-112740994) | |
| 798-1025, gnl|Mm7|chr9 (49415621-49415394) |