Non-Coding RNA Search

Ss1.1-Tra1-TCH01D040103.5

Sequence:


               
               AGATGTTTTCGAGCCCGGCCTCGGCGGCGTTCGTGGCGGTTACGGCGACAGCGAAGACCA
CGACAGAGACGGCCGCGCCGAGGCCCTCGTACAGGGGGTAAACCCTCCTGCGCCGGCCGT
GCCTTGGGTCCGTGAGGGCGAGGGGGGCGTGGCGACAGGCGAGGAGGAAGGAGGGGCGCG
GTTTCGAGCCCCGGCCCCGGCGCCCGGGAGGAGCCCCCCAGTCGCGCCCGCTCCCGTCCC
CTCGGCAGAGCGAGATCCAGGATGAGAAGACTGATAAAAGAAGAAGCTAGCTGAACAGCT
GTAAGATGCCCAAATCTGGGTTTGCAAAACCAGTTCAGAGTGAAAATTCTGACAGTGACA
GCAATATGGTAGAAAAATCATATGGAAGAAAGAGTAAAGACAAGATCGCATCCTATAGCA
AAACTCCAAAAATTGATCGAAGCGATGTGGGCAAGGAGATGAAAGAGAAATCATCCATGA
AACGTAAACTTCCTTTTACTATCAGCCCATCAAGAAATGAAGAACGAGATTCAGACACTG
AGAAAGAAGGTCCAGAAAAGAAGAAAACAAAAAAGGAAGCTGGAAATAAGAAGTCCACTC
CAGTTAGCATTCTTTTTGGTTATCCACTCTCAGAGCGAAAGCAGATGGCACTTCTTATGC
AGATGACAGCAAGAGACAACAGTCCAGATTCCACACCAAATCATCCATCGCAGACAACAC
CAGCCCAAAAGAAAACCCCCAGTTCCTCATCTCGACAAAAAGATAAAGTTAATAAAAGAA
ATGAACGTGGAGAAACCCCTTTACACATGGCAGCTATTCGAGGAGATGTGAAACAAGTCA
AAGAACTGATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATGTTTTCGAGCCCGGCCTCGGCGGCGTTCGTGGCGGTTACGGCGACAGCGAAGACCA
CGACAGAGACGGCCGCGCCGAGGCCCTCGTACAGGGGGTAAACCCTCCTGCGCCGGCCGT
GCCTTGGGTCCGTGAGGGCGAGGGGGGCGTGGCGACAGGCGAGGAGGAAGGAGGGGCGCG
GTTTCGAGCCCCGGCCCCGGCGCCCGGGAGGAGCCCCCCAGTCGCGCCCGCTCCCGTCCC
CTCGGCAGAGCGAGATCCAGGATGAGAAGACTGATAAAAGAAGAAGCTAGCTGAACAGCT
GTAAGATGCCCAAATCTGGGTTTGCAAAACCAGTTCAGAGTGAAAATTCTGACAGTGACA
GCAATATGGTAGAAAAATCATATGGAAGAAAGAGTAAAGACAAGATCGCATCCTATAGCA
AAACTCCAAAAATTGATCGAAGCGATGTGGGCAAGGAGATGAAAGAGAAATCATCCATGA
AACGTAAACTTCCTTTTACTATCAGCCCATCAAGAAATGAAGAACGAGATTCAGACACTG
AGAAAGAAGGTCCAGAAAAGAAGAAAACAAAAAAGGAAGCTGGAAATAAGAAGTCCACTC
CAGTTAGCATTCTTTTTGGTTATCCACTCTCAGAGCGAAAGCAGATGGCACTTCTTATGC
AGATGACAGCAAGAGACAACAGTCCAGATTCCACACCAAATCATCCATCGCAGACAACAC
CAGCCCAAAAGAAAACCCCCAGTTCCTCATCTCGACAAAAAGATAAAGTTAATAAAAGAA
ATGAACGTGGAGAAACCCCTTTACACATGGCAGCTATTCGAGGAGATGTGAAACAAGTCA
AAGAACTGATAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q9CQQ3_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9CQQ3_MOUSE

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               391-538, gnl|bosTau2|chr24 (28935781-28935928)
               

               
               391-538, gnl|Hg17|chr18 (9185547-9185694)
               

               
               391-538, gnl|Mm7|chr17 (64267467-64267320)
               


               
               685-852, gnl|bosTau2|chr24 (28951336-28951503)
               

               
               685-852, gnl|Hg17|chr18 (9201579-9201746)
               

               
               685-852, gnl|Mm7|chr17 (64249106-64248939)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               391-538, gnl|bosTau2|chr24 (28935781-28935928)
               

               
               391-538, gnl|Hg17|chr18 (9185547-9185694)
               

               
               391-538, gnl|Mm7|chr17 (64267467-64267320)
               


               
               685-852, gnl|bosTau2|chr24 (28951336-28951503)
               

               
               685-852, gnl|Hg17|chr18 (9201579-9201746)
               

               
               685-852, gnl|Mm7|chr17 (64249106-64248939)

	391-538, gnl\|bosTau2\|chr24 (28935781-28935928)
	391-538, gnl\|Hg17\|chr18 (9185547-9185694)
	391-538, gnl\|Mm7\|chr17 (64267467-64267320)

	685-852, gnl\|bosTau2\|chr24 (28951336-28951503)
	685-852, gnl\|Hg17\|chr18 (9201579-9201746)
	685-852, gnl\|Mm7\|chr17 (64249106-64248939)